Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2062

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2061 and B158DRAFT_2062 are separated by 192 nucleotidesB158DRAFT_2062 and B158DRAFT_2063 are separated by 70 nucleotides B158DRAFT_2061: B158DRAFT_2061 - hypothetical protein, at 195,104 to 197,074 _2061 B158DRAFT_2062: B158DRAFT_2062 - glutamyl-tRNA reductase (EC 1.2.1.70), at 197,267 to 198,523 _2062 B158DRAFT_2063: B158DRAFT_2063 - peptide chain release factor 1, at 198,594 to 199,688 _2063 Position (kb) 197 198 199Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 196.318 kb on + strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.326 kb on - strand, within B158DRAFT_2061at 196.368 kb on + strand, within B158DRAFT_2061at 196.368 kb on + strand, within B158DRAFT_2061at 196.370 kb on - strand, within B158DRAFT_2061at 196.396 kb on - strand, within B158DRAFT_2061at 196.413 kb on + strand, within B158DRAFT_2061at 196.421 kb on - strand, within B158DRAFT_2061at 196.474 kb on - strand, within B158DRAFT_2061at 196.483 kb on - strand, within B158DRAFT_2061at 196.508 kb on + strand, within B158DRAFT_2061at 196.508 kb on + strand, within B158DRAFT_2061at 196.513 kb on + strand, within B158DRAFT_2061at 196.521 kb on - strand, within B158DRAFT_2061at 196.551 kb on + strand, within B158DRAFT_2061at 196.551 kb on + strand, within B158DRAFT_2061at 196.556 kb on + strand, within B158DRAFT_2061at 196.559 kb on - strand, within B158DRAFT_2061at 196.559 kb on - strand, within B158DRAFT_2061at 196.559 kb on - strand, within B158DRAFT_2061at 196.580 kb on - strand, within B158DRAFT_2061at 196.653 kb on + strand, within B158DRAFT_2061at 196.653 kb on + strand, within B158DRAFT_2061at 196.676 kb on + strand, within B158DRAFT_2061at 196.728 kb on - strand, within B158DRAFT_2061at 196.728 kb on - strand, within B158DRAFT_2061at 196.741 kb on - strand, within B158DRAFT_2061at 196.743 kb on + strand, within B158DRAFT_2061at 196.743 kb on + strand, within B158DRAFT_2061at 196.743 kb on + strand, within B158DRAFT_2061at 196.743 kb on + strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.751 kb on - strand, within B158DRAFT_2061at 196.753 kb on + strand, within B158DRAFT_2061at 196.753 kb on + strand, within B158DRAFT_2061at 196.753 kb on + strand, within B158DRAFT_2061at 196.761 kb on - strand, within B158DRAFT_2061at 196.761 kb on - strand, within B158DRAFT_2061at 196.761 kb on - strand, within B158DRAFT_2061at 196.761 kb on - strand, within B158DRAFT_2061at 196.778 kb on + strand, within B158DRAFT_2061at 196.921 kb on - strandat 196.921 kb on - strandat 196.947 kb on - strandat 196.975 kb on + strandat 196.984 kb on + strandat 196.987 kb on - strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.989 kb on + strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.997 kb on - strandat 196.999 kb on + strandat 197.007 kb on - strandat 197.080 kb on - strandat 197.180 kb on - strandat 197.187 kb on - strandat 198.539 kb on + strandat 198.545 kb on + strandat 198.547 kb on + strandat 198.560 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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196,318 + B158DRAFT_2061 0.62 -2.5
196,326 - B158DRAFT_2061 0.62 -1.5
196,326 - B158DRAFT_2061 0.62 -2.0
196,326 - B158DRAFT_2061 0.62 -4.5
196,326 - B158DRAFT_2061 0.62 -4.8
196,326 - B158DRAFT_2061 0.62 -5.2
196,326 - B158DRAFT_2061 0.62 -4.7
196,368 + B158DRAFT_2061 0.64 -2.5
196,368 + B158DRAFT_2061 0.64 -2.9
196,370 - B158DRAFT_2061 0.64 -2.8
196,396 - B158DRAFT_2061 0.66 -1.5
196,413 + B158DRAFT_2061 0.66 -3.1
196,421 - B158DRAFT_2061 0.67 -2.9
196,474 - B158DRAFT_2061 0.70 -3.0
196,483 - B158DRAFT_2061 0.70 -2.3
196,508 + B158DRAFT_2061 0.71 -0.7
196,508 + B158DRAFT_2061 0.71 -3.3
196,513 + B158DRAFT_2061 0.71 -3.0
196,521 - B158DRAFT_2061 0.72 -1.5
196,551 + B158DRAFT_2061 0.73 -4.2
196,551 + B158DRAFT_2061 0.73 -3.0
196,556 + B158DRAFT_2061 0.74 -2.9
196,559 - B158DRAFT_2061 0.74 -2.9
196,559 - B158DRAFT_2061 0.74 -2.7
196,559 - B158DRAFT_2061 0.74 -5.5
196,580 - B158DRAFT_2061 0.75 -2.6
196,653 + B158DRAFT_2061 0.79 -3.1
196,653 + B158DRAFT_2061 0.79 -4.0
196,676 + B158DRAFT_2061 0.80 -4.8
196,728 - B158DRAFT_2061 0.82 -2.2
196,728 - B158DRAFT_2061 0.82 -2.0
196,741 - B158DRAFT_2061 0.83 -3.0
196,743 + B158DRAFT_2061 0.83 -3.8
196,743 + B158DRAFT_2061 0.83 -4.8
196,743 + B158DRAFT_2061 0.83 -5.5
196,743 + B158DRAFT_2061 0.83 -4.2
196,751 - B158DRAFT_2061 0.84 -2.5
196,751 - B158DRAFT_2061 0.84 -3.1
196,751 - B158DRAFT_2061 0.84 -2.5
196,751 - B158DRAFT_2061 0.84 -1.5
196,751 - B158DRAFT_2061 0.84 -2.7
196,751 - B158DRAFT_2061 0.84 -2.6
196,751 - B158DRAFT_2061 0.84 -1.5
196,751 - B158DRAFT_2061 0.84 -1.2
196,751 - B158DRAFT_2061 0.84 -2.0
196,753 + B158DRAFT_2061 0.84 -2.3
196,753 + B158DRAFT_2061 0.84 -2.2
196,753 + B158DRAFT_2061 0.84 -3.0
196,761 - B158DRAFT_2061 0.84 -4.9
196,761 - B158DRAFT_2061 0.84 -2.7
196,761 - B158DRAFT_2061 0.84 -1.6
196,761 - B158DRAFT_2061 0.84 -3.6
196,778 + B158DRAFT_2061 0.85 -2.2
196,921 - -3.1
196,921 - -2.9
196,947 - -2.7
196,975 + -3.2
196,984 + -3.0
196,987 - -2.3
196,989 + -2.7
196,989 + -4.8
196,989 + -2.4
196,989 + -2.2
196,989 + -2.8
196,989 + -3.2
196,989 + -1.5
196,989 + -2.3
196,989 + -1.5
196,989 + -3.5
196,989 + -1.2
196,989 + -3.6
196,989 + -2.7
196,989 + -3.2
196,989 + -2.5
196,989 + -0.2
196,989 + -4.3
196,989 + -0.2
196,989 + -3.6
196,989 + -0.2
196,989 + -2.0
196,989 + -2.7
196,989 + -3.7
196,989 + -1.5
196,989 + -3.3
196,989 + -2.3
196,989 + -2.3
196,989 + -2.7
196,989 + -3.1
196,989 + -1.9
196,989 + -2.7
196,997 - -3.1
196,997 - -3.2
196,997 - -1.7
196,997 - -3.7
196,997 - -2.3
196,997 - -3.1
196,997 - -4.3
196,997 - -0.2
196,997 - -2.6
196,997 - -2.3
196,997 - -2.2
196,997 - -5.0
196,997 - -2.3
196,997 - -4.0
196,997 - -2.9
196,997 - -3.7
196,997 - -3.2
196,997 - -1.5
196,997 - -2.6
196,997 - -1.9
196,997 - -5.9
196,997 - -3.0
196,997 - -3.9
196,997 - -3.9
196,997 - -2.2
196,997 - -2.9
196,997 - -2.7
196,997 - -2.7
196,997 - -2.5
196,997 - -1.7
196,997 - -3.5
196,997 - -2.6
196,997 - -1.7
196,997 - -2.9
196,999 + -3.4
197,007 - -4.2
197,080 - -4.2
197,180 - -0.2
197,187 - +0.5
198,539 + +1.3
198,545 + +0.2
198,547 + +1.4
198,560 + +0.1

Or see this region's nucleotide sequence