Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1750

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1749 and B158DRAFT_1750 are separated by 34 nucleotidesB158DRAFT_1750 and B158DRAFT_1751 are separated by 118 nucleotides B158DRAFT_1749: B158DRAFT_1749 - conserved hypothetical protein, YceG family, at 1,832,152 to 1,833,156 _1749 B158DRAFT_1750: B158DRAFT_1750 - aminodeoxychorismate lyase, at 1,833,191 to 1,834,045 _1750 B158DRAFT_1751: B158DRAFT_1751 - beta-ketoacyl-acyl-carrier-protein synthase II, at 1,834,164 to 1,835,402 _1751 Position (kb) 1833 1834 1835Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1832.283 kb on - strand, within B158DRAFT_1749at 1832.337 kb on - strand, within B158DRAFT_1749at 1832.339 kb on - strand, within B158DRAFT_1749at 1832.350 kb on - strand, within B158DRAFT_1749at 1832.443 kb on - strand, within B158DRAFT_1749at 1832.455 kb on - strand, within B158DRAFT_1749at 1832.501 kb on - strand, within B158DRAFT_1749at 1833.196 kb on - strandat 1833.228 kb on - strandat 1833.326 kb on + strand, within B158DRAFT_1750at 1833.344 kb on - strand, within B158DRAFT_1750at 1833.357 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.367 kb on + strand, within B158DRAFT_1750at 1833.375 kb on - strand, within B158DRAFT_1750at 1833.406 kb on - strand, within B158DRAFT_1750at 1833.419 kb on - strand, within B158DRAFT_1750at 1833.427 kb on + strand, within B158DRAFT_1750at 1833.552 kb on + strand, within B158DRAFT_1750at 1833.560 kb on - strand, within B158DRAFT_1750at 1833.560 kb on - strand, within B158DRAFT_1750at 1833.609 kb on - strand, within B158DRAFT_1750at 1833.624 kb on - strand, within B158DRAFT_1750at 1833.643 kb on - strand, within B158DRAFT_1750at 1833.646 kb on + strand, within B158DRAFT_1750at 1833.647 kb on + strand, within B158DRAFT_1750at 1833.647 kb on + strand, within B158DRAFT_1750at 1833.671 kb on - strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.680 kb on + strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.688 kb on - strand, within B158DRAFT_1750at 1833.731 kb on - strand, within B158DRAFT_1750at 1833.738 kb on - strand, within B158DRAFT_1750at 1833.738 kb on - strand, within B158DRAFT_1750at 1833.740 kb on - strand, within B158DRAFT_1750at 1833.762 kb on + strand, within B158DRAFT_1750at 1833.772 kb on - strand, within B158DRAFT_1750at 1833.793 kb on - strand, within B158DRAFT_1750at 1833.793 kb on - strand, within B158DRAFT_1750at 1833.887 kb on + strand, within B158DRAFT_1750at 1833.887 kb on + strand, within B158DRAFT_1750at 1833.889 kb on + strand, within B158DRAFT_1750at 1833.946 kb on - strand, within B158DRAFT_1750at 1833.949 kb on - strand, within B158DRAFT_1750at 1833.960 kb on - strandat 1834.004 kb on - strandat 1834.124 kb on - strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.149 kb on + strandat 1834.157 kb on - strandat 1834.157 kb on - strandat 1834.157 kb on - strandat 1834.207 kb on - strandat 1834.278 kb on + strandat 1834.395 kb on - strand, within B158DRAFT_1751at 1834.395 kb on - strand, within B158DRAFT_1751at 1834.395 kb on - strand, within B158DRAFT_1751at 1834.395 kb on - strand, within B158DRAFT_1751at 1834.397 kb on + strand, within B158DRAFT_1751at 1834.407 kb on + strand, within B158DRAFT_1751at 1834.407 kb on + strand, within B158DRAFT_1751at 1834.415 kb on - strand, within B158DRAFT_1751at 1834.415 kb on - strand, within B158DRAFT_1751at 1834.415 kb on - strand, within B158DRAFT_1751at 1834.478 kb on + strand, within B158DRAFT_1751at 1834.478 kb on + strand, within B158DRAFT_1751at 1834.495 kb on + strand, within B158DRAFT_1751at 1834.519 kb on + strand, within B158DRAFT_1751at 1834.519 kb on + strand, within B158DRAFT_1751at 1834.519 kb on + strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.527 kb on - strand, within B158DRAFT_1751at 1834.531 kb on + strand, within B158DRAFT_1751at 1834.543 kb on + strand, within B158DRAFT_1751at 1834.636 kb on + strand, within B158DRAFT_1751at 1834.644 kb on - strand, within B158DRAFT_1751at 1834.644 kb on - strand, within B158DRAFT_1751at 1834.674 kb on - strand, within B158DRAFT_1751at 1834.685 kb on + strand, within B158DRAFT_1751at 1834.727 kb on + strand, within B158DRAFT_1751at 1834.727 kb on + strand, within B158DRAFT_1751at 1834.758 kb on - strand, within B158DRAFT_1751at 1834.758 kb on - strand, within B158DRAFT_1751at 1834.758 kb on - strand, within B158DRAFT_1751at 1834.814 kb on + strand, within B158DRAFT_1751at 1834.822 kb on - strand, within B158DRAFT_1751at 1834.845 kb on + strand, within B158DRAFT_1751at 1834.886 kb on + strand, within B158DRAFT_1751at 1834.948 kb on - strand, within B158DRAFT_1751at 1834.949 kb on - strand, within B158DRAFT_1751at 1834.949 kb on - strand, within B158DRAFT_1751at 1834.949 kb on - strand, within B158DRAFT_1751at 1834.949 kb on - strand, within B158DRAFT_1751at 1834.949 kb on - strand, within B158DRAFT_1751at 1835.031 kb on - strand, within B158DRAFT_1751

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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1,832,283 - B158DRAFT_1749 0.13 -1.3
1,832,337 - B158DRAFT_1749 0.18 -1.3
1,832,339 - B158DRAFT_1749 0.19 -2.6
1,832,350 - B158DRAFT_1749 0.20 -0.9
1,832,443 - B158DRAFT_1749 0.29 -1.2
1,832,455 - B158DRAFT_1749 0.30 -2.3
1,832,501 - B158DRAFT_1749 0.35 -2.4
1,833,196 - +1.1
1,833,228 - +1.8
1,833,326 + B158DRAFT_1750 0.16 -0.5
1,833,344 - B158DRAFT_1750 0.18 -0.5
1,833,357 + B158DRAFT_1750 0.19 -0.2
1,833,367 + B158DRAFT_1750 0.21 +0.5
1,833,367 + B158DRAFT_1750 0.21 -0.0
1,833,367 + B158DRAFT_1750 0.21 +0.7
1,833,375 - B158DRAFT_1750 0.22 +0.4
1,833,406 - B158DRAFT_1750 0.25 +0.2
1,833,419 - B158DRAFT_1750 0.27 +0.4
1,833,427 + B158DRAFT_1750 0.28 -2.5
1,833,552 + B158DRAFT_1750 0.42 +0.3
1,833,560 - B158DRAFT_1750 0.43 +0.3
1,833,560 - B158DRAFT_1750 0.43 +0.4
1,833,609 - B158DRAFT_1750 0.49 -0.0
1,833,624 - B158DRAFT_1750 0.51 -0.4
1,833,643 - B158DRAFT_1750 0.53 +0.5
1,833,646 + B158DRAFT_1750 0.53 +0.1
1,833,647 + B158DRAFT_1750 0.53 +0.1
1,833,647 + B158DRAFT_1750 0.53 +0.8
1,833,671 - B158DRAFT_1750 0.56 +0.1
1,833,680 + B158DRAFT_1750 0.57 +0.0
1,833,680 + B158DRAFT_1750 0.57 +0.5
1,833,680 + B158DRAFT_1750 0.57 +0.5
1,833,680 + B158DRAFT_1750 0.57 +0.7
1,833,680 + B158DRAFT_1750 0.57 +0.8
1,833,680 + B158DRAFT_1750 0.57 +0.6
1,833,680 + B158DRAFT_1750 0.57 +0.6
1,833,688 - B158DRAFT_1750 0.58 +0.1
1,833,688 - B158DRAFT_1750 0.58 -0.6
1,833,688 - B158DRAFT_1750 0.58 +0.4
1,833,688 - B158DRAFT_1750 0.58 +0.6
1,833,688 - B158DRAFT_1750 0.58 -0.5
1,833,688 - B158DRAFT_1750 0.58 -0.1
1,833,688 - B158DRAFT_1750 0.58 -0.1
1,833,731 - B158DRAFT_1750 0.63 +0.2
1,833,738 - B158DRAFT_1750 0.64 -0.4
1,833,738 - B158DRAFT_1750 0.64 -0.4
1,833,740 - B158DRAFT_1750 0.64 +0.2
1,833,762 + B158DRAFT_1750 0.67 +0.3
1,833,772 - B158DRAFT_1750 0.68 -0.2
1,833,793 - B158DRAFT_1750 0.70 -0.4
1,833,793 - B158DRAFT_1750 0.70 +0.3
1,833,887 + B158DRAFT_1750 0.81 +0.4
1,833,887 + B158DRAFT_1750 0.81 +0.4
1,833,889 + B158DRAFT_1750 0.82 +0.2
1,833,946 - B158DRAFT_1750 0.88 -0.3
1,833,949 - B158DRAFT_1750 0.89 -0.4
1,833,960 - +0.1
1,834,004 - -0.5
1,834,124 - -0.6
1,834,149 + -0.5
1,834,149 + -0.2
1,834,149 + -0.6
1,834,149 + -0.2
1,834,149 + +0.3
1,834,157 - -0.1
1,834,157 - +0.5
1,834,157 - +0.3
1,834,207 - -2.4
1,834,278 + -1.5
1,834,395 - B158DRAFT_1751 0.19 -1.8
1,834,395 - B158DRAFT_1751 0.19 -0.9
1,834,395 - B158DRAFT_1751 0.19 -0.4
1,834,395 - B158DRAFT_1751 0.19 -1.5
1,834,397 + B158DRAFT_1751 0.19 -1.4
1,834,407 + B158DRAFT_1751 0.20 -2.5
1,834,407 + B158DRAFT_1751 0.20 -2.1
1,834,415 - B158DRAFT_1751 0.20 -0.9
1,834,415 - B158DRAFT_1751 0.20 -1.6
1,834,415 - B158DRAFT_1751 0.20 -0.8
1,834,478 + B158DRAFT_1751 0.25 -1.3
1,834,478 + B158DRAFT_1751 0.25 -1.3
1,834,495 + B158DRAFT_1751 0.27 -1.2
1,834,519 + B158DRAFT_1751 0.29 -1.6
1,834,519 + B158DRAFT_1751 0.29 -1.4
1,834,519 + B158DRAFT_1751 0.29 -2.2
1,834,527 - B158DRAFT_1751 0.29 -2.2
1,834,527 - B158DRAFT_1751 0.29 -2.5
1,834,527 - B158DRAFT_1751 0.29 -1.5
1,834,527 - B158DRAFT_1751 0.29 -1.9
1,834,527 - B158DRAFT_1751 0.29 -0.6
1,834,527 - B158DRAFT_1751 0.29 +1.7
1,834,527 - B158DRAFT_1751 0.29 -1.4
1,834,527 - B158DRAFT_1751 0.29 -2.0
1,834,531 + B158DRAFT_1751 0.30 -0.6
1,834,543 + B158DRAFT_1751 0.31 -1.1
1,834,636 + B158DRAFT_1751 0.38 -2.6
1,834,644 - B158DRAFT_1751 0.39 -1.4
1,834,644 - B158DRAFT_1751 0.39 -1.5
1,834,674 - B158DRAFT_1751 0.41 -1.2
1,834,685 + B158DRAFT_1751 0.42 -2.1
1,834,727 + B158DRAFT_1751 0.45 -0.6
1,834,727 + B158DRAFT_1751 0.45 -1.6
1,834,758 - B158DRAFT_1751 0.48 -1.5
1,834,758 - B158DRAFT_1751 0.48 -1.6
1,834,758 - B158DRAFT_1751 0.48 -3.3
1,834,814 + B158DRAFT_1751 0.52 -1.6
1,834,822 - B158DRAFT_1751 0.53 -1.1
1,834,845 + B158DRAFT_1751 0.55 -0.8
1,834,886 + B158DRAFT_1751 0.58 -2.2
1,834,948 - B158DRAFT_1751 0.63 -1.5
1,834,949 - B158DRAFT_1751 0.63 -1.0
1,834,949 - B158DRAFT_1751 0.63 -0.4
1,834,949 - B158DRAFT_1751 0.63 -1.8
1,834,949 - B158DRAFT_1751 0.63 -1.9
1,834,949 - B158DRAFT_1751 0.63 -2.1
1,835,031 - B158DRAFT_1751 0.70 -0.8

Or see this region's nucleotide sequence