Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1619 and B158DRAFT_1620 are separated by 9 nucleotides B158DRAFT_1620 and B158DRAFT_1621 are separated by 267 nucleotides
B158DRAFT_1619: B158DRAFT_1619 - choline/carnitine/betaine transport, at 1,679,785 to 1,681,398
_1619
B158DRAFT_1620: B158DRAFT_1620 - hypothetical protein, at 1,681,408 to 1,682,511
_1620
B158DRAFT_1621: B158DRAFT_1621 - Initiator Replication protein., at 1,682,779 to 1,683,471
_1621
Position (kb)
1681
1682
1683 Strain fitness (log2 ratio)
-2
-1
0
1 at 1680.512 kb on + strand, within B158DRAFT_1619 at 1680.527 kb on + strand, within B158DRAFT_1619 at 1680.540 kb on + strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.552 kb on + strand, within B158DRAFT_1619 at 1680.560 kb on - strand, within B158DRAFT_1619 at 1680.560 kb on - strand, within B158DRAFT_1619 at 1680.588 kb on + strand, within B158DRAFT_1619 at 1680.594 kb on + strand, within B158DRAFT_1619 at 1680.609 kb on - strand, within B158DRAFT_1619 at 1680.668 kb on + strand, within B158DRAFT_1619 at 1680.799 kb on + strand, within B158DRAFT_1619 at 1680.807 kb on - strand, within B158DRAFT_1619 at 1680.876 kb on + strand, within B158DRAFT_1619 at 1680.884 kb on - strand, within B158DRAFT_1619 at 1680.889 kb on - strand, within B158DRAFT_1619 at 1680.928 kb on + strand, within B158DRAFT_1619 at 1680.936 kb on - strand, within B158DRAFT_1619 at 1680.980 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1681.000 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.020 kb on - strand, within B158DRAFT_1619 at 1681.119 kb on - strand, within B158DRAFT_1619 at 1681.138 kb on + strand, within B158DRAFT_1619 at 1681.181 kb on + strand, within B158DRAFT_1619 at 1681.181 kb on + strand, within B158DRAFT_1619 at 1681.189 kb on + strand, within B158DRAFT_1619 at 1681.189 kb on - strand, within B158DRAFT_1619 at 1681.293 kb on + strand at 1681.293 kb on + strand at 1681.301 kb on - strand at 1681.301 kb on - strand at 1681.318 kb on + strand at 1681.326 kb on - strand at 1681.326 kb on - strand at 1681.340 kb on + strand at 1681.348 kb on - strand at 1681.348 kb on - strand at 1681.406 kb on + strand at 1681.414 kb on + strand at 1681.422 kb on - strand at 1681.470 kb on + strand at 1681.473 kb on - strand at 1681.478 kb on - strand at 1681.537 kb on - strand, within B158DRAFT_1620 at 1681.541 kb on + strand, within B158DRAFT_1620 at 1681.549 kb on - strand, within B158DRAFT_1620 at 1681.551 kb on + strand, within B158DRAFT_1620 at 1681.552 kb on + strand, within B158DRAFT_1620 at 1681.602 kb on + strand, within B158DRAFT_1620 at 1681.610 kb on + strand, within B158DRAFT_1620 at 1681.610 kb on - strand, within B158DRAFT_1620 at 1681.631 kb on - strand, within B158DRAFT_1620 at 1681.659 kb on - strand, within B158DRAFT_1620 at 1681.703 kb on - strand, within B158DRAFT_1620 at 1681.703 kb on - strand, within B158DRAFT_1620 at 1681.760 kb on + strand, within B158DRAFT_1620 at 1681.762 kb on + strand, within B158DRAFT_1620 at 1681.770 kb on - strand, within B158DRAFT_1620 at 1681.770 kb on - strand, within B158DRAFT_1620 at 1681.861 kb on - strand, within B158DRAFT_1620 at 1681.930 kb on + strand, within B158DRAFT_1620 at 1682.009 kb on - strand, within B158DRAFT_1620 at 1682.053 kb on + strand, within B158DRAFT_1620 at 1682.061 kb on - strand, within B158DRAFT_1620 at 1682.087 kb on - strand, within B158DRAFT_1620 at 1682.098 kb on + strand, within B158DRAFT_1620 at 1682.213 kb on + strand, within B158DRAFT_1620 at 1682.221 kb on - strand, within B158DRAFT_1620 at 1682.254 kb on + strand, within B158DRAFT_1620 at 1682.262 kb on - strand, within B158DRAFT_1620 at 1682.319 kb on + strand, within B158DRAFT_1620 at 1682.495 kb on + strand at 1682.551 kb on - strand at 1682.551 kb on - strand at 1682.551 kb on - strand at 1682.562 kb on - strand at 1682.575 kb on - strand at 1682.575 kb on - strand at 1682.652 kb on + strand at 1682.652 kb on + strand at 1682.657 kb on + strand at 1682.657 kb on + strand at 1682.660 kb on - strand at 1682.681 kb on - strand at 1682.704 kb on - strand at 1682.704 kb on - strand at 1682.704 kb on - strand at 1682.873 kb on + strand, within B158DRAFT_1621 at 1682.873 kb on + strand, within B158DRAFT_1621 at 1682.874 kb on + strand, within B158DRAFT_1621 at 1682.950 kb on + strand, within B158DRAFT_1621 at 1682.973 kb on - strand, within B158DRAFT_1621 at 1682.990 kb on + strand, within B158DRAFT_1621 at 1683.078 kb on + strand, within B158DRAFT_1621 at 1683.126 kb on + strand, within B158DRAFT_1621 at 1683.222 kb on - strand, within B158DRAFT_1621 at 1683.243 kb on + strand, within B158DRAFT_1621 at 1683.251 kb on - strand, within B158DRAFT_1621 at 1683.251 kb on - strand, within B158DRAFT_1621 at 1683.251 kb on - strand, within B158DRAFT_1621 at 1683.338 kb on - strand, within B158DRAFT_1621 at 1683.372 kb on + strand, within B158DRAFT_1621 at 1683.372 kb on + strand, within B158DRAFT_1621 at 1683.412 kb on + strand at 1683.412 kb on + strand at 1683.417 kb on + strand at 1683.434 kb on + strand at 1683.503 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,680,512 + B158DRAFT_1619 0.45 -0.8 1,680,527 + B158DRAFT_1619 0.46 -0.1 1,680,540 + B158DRAFT_1619 0.47 +0.7 1,680,548 - B158DRAFT_1619 0.47 -0.3 1,680,548 - B158DRAFT_1619 0.47 +0.3 1,680,548 - B158DRAFT_1619 0.47 -0.6 1,680,552 + B158DRAFT_1619 0.48 -0.2 1,680,560 - B158DRAFT_1619 0.48 +0.3 1,680,560 - B158DRAFT_1619 0.48 -0.4 1,680,588 + B158DRAFT_1619 0.50 +0.2 1,680,594 + B158DRAFT_1619 0.50 -0.2 1,680,609 - B158DRAFT_1619 0.51 -0.2 1,680,668 + B158DRAFT_1619 0.55 +0.0 1,680,799 + B158DRAFT_1619 0.63 -1.2 1,680,807 - B158DRAFT_1619 0.63 -0.1 1,680,876 + B158DRAFT_1619 0.68 -0.1 1,680,884 - B158DRAFT_1619 0.68 -0.0 1,680,889 - B158DRAFT_1619 0.68 -0.4 1,680,928 + B158DRAFT_1619 0.71 -0.1 1,680,936 - B158DRAFT_1619 0.71 +0.5 1,680,980 + B158DRAFT_1619 0.74 +0.9 1,680,992 + B158DRAFT_1619 0.75 +0.1 1,680,992 + B158DRAFT_1619 0.75 -0.9 1,680,992 + B158DRAFT_1619 0.75 -0.6 1,681,000 + B158DRAFT_1619 0.75 -0.2 1,681,012 + B158DRAFT_1619 0.76 -0.4 1,681,012 + B158DRAFT_1619 0.76 -0.1 1,681,012 + B158DRAFT_1619 0.76 -0.1 1,681,020 - B158DRAFT_1619 0.77 +0.3 1,681,119 - B158DRAFT_1619 0.83 +0.1 1,681,138 + B158DRAFT_1619 0.84 +0.0 1,681,181 + B158DRAFT_1619 0.86 -0.2 1,681,181 + B158DRAFT_1619 0.86 +0.2 1,681,189 + B158DRAFT_1619 0.87 -0.6 1,681,189 - B158DRAFT_1619 0.87 +0.4 1,681,293 + -0.9 1,681,293 + +0.2 1,681,301 - -0.2 1,681,301 - -1.0 1,681,318 + +0.5 1,681,326 - -1.1 1,681,326 - -0.3 1,681,340 + +0.3 1,681,348 - -0.5 1,681,348 - -1.6 1,681,406 + +0.4 1,681,414 + +0.5 1,681,422 - +0.5 1,681,470 + +0.2 1,681,473 - -1.0 1,681,478 - +0.1 1,681,537 - B158DRAFT_1620 0.12 +0.7 1,681,541 + B158DRAFT_1620 0.12 +0.4 1,681,549 - B158DRAFT_1620 0.13 +0.1 1,681,551 + B158DRAFT_1620 0.13 -0.3 1,681,552 + B158DRAFT_1620 0.13 -0.3 1,681,602 + B158DRAFT_1620 0.18 -0.1 1,681,610 + B158DRAFT_1620 0.18 +0.0 1,681,610 - B158DRAFT_1620 0.18 +0.8 1,681,631 - B158DRAFT_1620 0.20 +0.9 1,681,659 - B158DRAFT_1620 0.23 -0.3 1,681,703 - B158DRAFT_1620 0.27 +0.2 1,681,703 - B158DRAFT_1620 0.27 +0.4 1,681,760 + B158DRAFT_1620 0.32 +0.1 1,681,762 + B158DRAFT_1620 0.32 +0.1 1,681,770 - B158DRAFT_1620 0.33 -0.3 1,681,770 - B158DRAFT_1620 0.33 +0.5 1,681,861 - B158DRAFT_1620 0.41 -0.7 1,681,930 + B158DRAFT_1620 0.47 -0.9 1,682,009 - B158DRAFT_1620 0.54 -0.5 1,682,053 + B158DRAFT_1620 0.58 -0.1 1,682,061 - B158DRAFT_1620 0.59 +1.0 1,682,087 - B158DRAFT_1620 0.62 -0.4 1,682,098 + B158DRAFT_1620 0.62 -1.9 1,682,213 + B158DRAFT_1620 0.73 -0.7 1,682,221 - B158DRAFT_1620 0.74 +0.2 1,682,254 + B158DRAFT_1620 0.77 -0.0 1,682,262 - B158DRAFT_1620 0.77 +0.2 1,682,319 + B158DRAFT_1620 0.83 -1.3 1,682,495 + +0.1 1,682,551 - +0.1 1,682,551 - -0.3 1,682,551 - -0.2 1,682,562 - -0.1 1,682,575 - -0.2 1,682,575 - -0.4 1,682,652 + +0.0 1,682,652 + +0.2 1,682,657 + +0.0 1,682,657 + -0.2 1,682,660 - +0.7 1,682,681 - +0.2 1,682,704 - +0.2 1,682,704 - -0.2 1,682,704 - -0.1 1,682,873 + B158DRAFT_1621 0.14 -0.4 1,682,873 + B158DRAFT_1621 0.14 +0.0 1,682,874 + B158DRAFT_1621 0.14 -0.2 1,682,950 + B158DRAFT_1621 0.25 -0.1 1,682,973 - B158DRAFT_1621 0.28 -0.2 1,682,990 + B158DRAFT_1621 0.30 +0.3 1,683,078 + B158DRAFT_1621 0.43 -0.3 1,683,126 + B158DRAFT_1621 0.50 +0.7 1,683,222 - B158DRAFT_1621 0.64 +0.1 1,683,243 + B158DRAFT_1621 0.67 -0.6 1,683,251 - B158DRAFT_1621 0.68 -0.2 1,683,251 - B158DRAFT_1621 0.68 -0.2 1,683,251 - B158DRAFT_1621 0.68 +0.0 1,683,338 - B158DRAFT_1621 0.81 -0.3 1,683,372 + B158DRAFT_1621 0.86 +0.1 1,683,372 + B158DRAFT_1621 0.86 +0.1 1,683,412 + +0.2 1,683,412 + -0.9 1,683,417 + +0.1 1,683,434 + -0.2 1,683,503 + -0.2
Or see this region's nucleotide sequence