Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1618 and B158DRAFT_1619 are separated by 44 nucleotides B158DRAFT_1619 and B158DRAFT_1620 are separated by 9 nucleotides
B158DRAFT_1618: B158DRAFT_1618 - sodium/proton antiporter, NhaD family (TC 2.A.62), at 1,678,337 to 1,679,740
_1618
B158DRAFT_1619: B158DRAFT_1619 - choline/carnitine/betaine transport, at 1,679,785 to 1,681,398
_1619
B158DRAFT_1620: B158DRAFT_1620 - hypothetical protein, at 1,681,408 to 1,682,511
_1620
Position (kb)
1679
1680
1681
1682 Strain fitness (log2 ratio)
-2
-1
0
1 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.808 kb on + strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.816 kb on - strand, within B158DRAFT_1618 at 1678.818 kb on - strand, within B158DRAFT_1618 at 1678.818 kb on - strand, within B158DRAFT_1618 at 1678.820 kb on + strand, within B158DRAFT_1618 at 1678.877 kb on + strand, within B158DRAFT_1618 at 1678.885 kb on - strand, within B158DRAFT_1618 at 1678.885 kb on - strand, within B158DRAFT_1618 at 1678.895 kb on - strand, within B158DRAFT_1618 at 1679.002 kb on + strand, within B158DRAFT_1618 at 1679.071 kb on + strand, within B158DRAFT_1618 at 1679.079 kb on + strand, within B158DRAFT_1618 at 1679.087 kb on - strand, within B158DRAFT_1618 at 1679.089 kb on + strand, within B158DRAFT_1618 at 1679.089 kb on + strand, within B158DRAFT_1618 at 1679.089 kb on + strand, within B158DRAFT_1618 at 1679.097 kb on - strand, within B158DRAFT_1618 at 1679.097 kb on - strand, within B158DRAFT_1618 at 1679.111 kb on - strand, within B158DRAFT_1618 at 1679.214 kb on + strand, within B158DRAFT_1618 at 1679.283 kb on + strand, within B158DRAFT_1618 at 1679.307 kb on - strand, within B158DRAFT_1618 at 1679.325 kb on + strand, within B158DRAFT_1618 at 1679.325 kb on + strand, within B158DRAFT_1618 at 1679.333 kb on - strand, within B158DRAFT_1618 at 1679.335 kb on + strand, within B158DRAFT_1618 at 1679.343 kb on - strand, within B158DRAFT_1618 at 1679.367 kb on + strand, within B158DRAFT_1618 at 1679.367 kb on + strand, within B158DRAFT_1618 at 1679.367 kb on + strand, within B158DRAFT_1618 at 1679.367 kb on + strand, within B158DRAFT_1618 at 1679.375 kb on - strand, within B158DRAFT_1618 at 1679.375 kb on - strand, within B158DRAFT_1618 at 1679.375 kb on - strand, within B158DRAFT_1618 at 1679.375 kb on - strand, within B158DRAFT_1618 at 1679.375 kb on - strand, within B158DRAFT_1618 at 1679.423 kb on + strand, within B158DRAFT_1618 at 1679.487 kb on - strand, within B158DRAFT_1618 at 1679.511 kb on + strand, within B158DRAFT_1618 at 1679.516 kb on + strand, within B158DRAFT_1618 at 1679.524 kb on - strand, within B158DRAFT_1618 at 1679.576 kb on + strand, within B158DRAFT_1618 at 1679.576 kb on + strand, within B158DRAFT_1618 at 1679.630 kb on + strand at 1679.695 kb on - strand at 1679.695 kb on - strand at 1679.695 kb on - strand at 1679.827 kb on - strand at 1679.856 kb on - strand at 1679.872 kb on + strand at 1679.880 kb on - strand at 1679.935 kb on + strand at 1679.943 kb on - strand at 1679.977 kb on - strand, within B158DRAFT_1619 at 1679.996 kb on + strand, within B158DRAFT_1619 at 1680.004 kb on - strand, within B158DRAFT_1619 at 1680.015 kb on + strand, within B158DRAFT_1619 at 1680.015 kb on + strand, within B158DRAFT_1619 at 1680.023 kb on - strand, within B158DRAFT_1619 at 1680.099 kb on + strand, within B158DRAFT_1619 at 1680.169 kb on - strand, within B158DRAFT_1619 at 1680.192 kb on - strand, within B158DRAFT_1619 at 1680.195 kb on + strand, within B158DRAFT_1619 at 1680.195 kb on + strand, within B158DRAFT_1619 at 1680.203 kb on - strand, within B158DRAFT_1619 at 1680.231 kb on - strand, within B158DRAFT_1619 at 1680.238 kb on + strand, within B158DRAFT_1619 at 1680.241 kb on - strand, within B158DRAFT_1619 at 1680.253 kb on + strand, within B158DRAFT_1619 at 1680.253 kb on + strand, within B158DRAFT_1619 at 1680.253 kb on + strand, within B158DRAFT_1619 at 1680.261 kb on - strand, within B158DRAFT_1619 at 1680.261 kb on - strand, within B158DRAFT_1619 at 1680.261 kb on - strand, within B158DRAFT_1619 at 1680.282 kb on + strand, within B158DRAFT_1619 at 1680.290 kb on - strand, within B158DRAFT_1619 at 1680.298 kb on - strand, within B158DRAFT_1619 at 1680.329 kb on - strand, within B158DRAFT_1619 at 1680.357 kb on + strand, within B158DRAFT_1619 at 1680.371 kb on + strand, within B158DRAFT_1619 at 1680.379 kb on - strand, within B158DRAFT_1619 at 1680.380 kb on + strand, within B158DRAFT_1619 at 1680.387 kb on - strand, within B158DRAFT_1619 at 1680.387 kb on - strand, within B158DRAFT_1619 at 1680.388 kb on - strand, within B158DRAFT_1619 at 1680.389 kb on + strand, within B158DRAFT_1619 at 1680.512 kb on + strand, within B158DRAFT_1619 at 1680.527 kb on + strand, within B158DRAFT_1619 at 1680.540 kb on + strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.548 kb on - strand, within B158DRAFT_1619 at 1680.552 kb on + strand, within B158DRAFT_1619 at 1680.560 kb on - strand, within B158DRAFT_1619 at 1680.560 kb on - strand, within B158DRAFT_1619 at 1680.588 kb on + strand, within B158DRAFT_1619 at 1680.594 kb on + strand, within B158DRAFT_1619 at 1680.609 kb on - strand, within B158DRAFT_1619 at 1680.668 kb on + strand, within B158DRAFT_1619 at 1680.799 kb on + strand, within B158DRAFT_1619 at 1680.807 kb on - strand, within B158DRAFT_1619 at 1680.876 kb on + strand, within B158DRAFT_1619 at 1680.884 kb on - strand, within B158DRAFT_1619 at 1680.889 kb on - strand, within B158DRAFT_1619 at 1680.928 kb on + strand, within B158DRAFT_1619 at 1680.936 kb on - strand, within B158DRAFT_1619 at 1680.980 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1680.992 kb on + strand, within B158DRAFT_1619 at 1681.000 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.012 kb on + strand, within B158DRAFT_1619 at 1681.020 kb on - strand, within B158DRAFT_1619 at 1681.119 kb on - strand, within B158DRAFT_1619 at 1681.138 kb on + strand, within B158DRAFT_1619 at 1681.181 kb on + strand, within B158DRAFT_1619 at 1681.181 kb on + strand, within B158DRAFT_1619 at 1681.189 kb on + strand, within B158DRAFT_1619 at 1681.189 kb on - strand, within B158DRAFT_1619 at 1681.293 kb on + strand at 1681.293 kb on + strand at 1681.301 kb on - strand at 1681.301 kb on - strand at 1681.318 kb on + strand at 1681.326 kb on - strand at 1681.326 kb on - strand at 1681.340 kb on + strand at 1681.348 kb on - strand at 1681.348 kb on - strand at 1681.406 kb on + strand at 1681.414 kb on + strand at 1681.422 kb on - strand at 1681.470 kb on + strand at 1681.473 kb on - strand at 1681.478 kb on - strand at 1681.537 kb on - strand, within B158DRAFT_1620 at 1681.541 kb on + strand, within B158DRAFT_1620 at 1681.549 kb on - strand, within B158DRAFT_1620 at 1681.551 kb on + strand, within B158DRAFT_1620 at 1681.552 kb on + strand, within B158DRAFT_1620 at 1681.602 kb on + strand, within B158DRAFT_1620 at 1681.610 kb on + strand, within B158DRAFT_1620 at 1681.610 kb on - strand, within B158DRAFT_1620 at 1681.631 kb on - strand, within B158DRAFT_1620 at 1681.659 kb on - strand, within B158DRAFT_1620 at 1681.703 kb on - strand, within B158DRAFT_1620 at 1681.703 kb on - strand, within B158DRAFT_1620 at 1681.760 kb on + strand, within B158DRAFT_1620 at 1681.762 kb on + strand, within B158DRAFT_1620 at 1681.770 kb on - strand, within B158DRAFT_1620 at 1681.770 kb on - strand, within B158DRAFT_1620 at 1681.861 kb on - strand, within B158DRAFT_1620 at 1681.930 kb on + strand, within B158DRAFT_1620 at 1682.009 kb on - strand, within B158DRAFT_1620 at 1682.053 kb on + strand, within B158DRAFT_1620 at 1682.061 kb on - strand, within B158DRAFT_1620 at 1682.087 kb on - strand, within B158DRAFT_1620 at 1682.098 kb on + strand, within B158DRAFT_1620 at 1682.213 kb on + strand, within B158DRAFT_1620 at 1682.221 kb on - strand, within B158DRAFT_1620 at 1682.254 kb on + strand, within B158DRAFT_1620 at 1682.262 kb on - strand, within B158DRAFT_1620 at 1682.319 kb on + strand, within B158DRAFT_1620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,678,808 + B158DRAFT_1618 0.34 -0.6 1,678,808 + B158DRAFT_1618 0.34 -0.4 1,678,808 + B158DRAFT_1618 0.34 +0.5 1,678,816 - B158DRAFT_1618 0.34 -0.4 1,678,816 - B158DRAFT_1618 0.34 +0.7 1,678,816 - B158DRAFT_1618 0.34 +0.7 1,678,816 - B158DRAFT_1618 0.34 +0.3 1,678,818 - B158DRAFT_1618 0.34 +0.2 1,678,818 - B158DRAFT_1618 0.34 -0.1 1,678,820 + B158DRAFT_1618 0.34 -1.7 1,678,877 + B158DRAFT_1618 0.38 +0.4 1,678,885 - B158DRAFT_1618 0.39 +1.0 1,678,885 - B158DRAFT_1618 0.39 -0.2 1,678,895 - B158DRAFT_1618 0.40 +0.6 1,679,002 + B158DRAFT_1618 0.47 +0.0 1,679,071 + B158DRAFT_1618 0.52 +0.2 1,679,079 + B158DRAFT_1618 0.53 +0.8 1,679,087 - B158DRAFT_1618 0.53 +0.1 1,679,089 + B158DRAFT_1618 0.54 -0.2 1,679,089 + B158DRAFT_1618 0.54 -0.1 1,679,089 + B158DRAFT_1618 0.54 +0.6 1,679,097 - B158DRAFT_1618 0.54 -0.2 1,679,097 - B158DRAFT_1618 0.54 +0.4 1,679,111 - B158DRAFT_1618 0.55 +0.5 1,679,214 + B158DRAFT_1618 0.62 +0.2 1,679,283 + B158DRAFT_1618 0.67 +0.9 1,679,307 - B158DRAFT_1618 0.69 +0.3 1,679,325 + B158DRAFT_1618 0.70 -0.5 1,679,325 + B158DRAFT_1618 0.70 +0.1 1,679,333 - B158DRAFT_1618 0.71 +0.2 1,679,335 + B158DRAFT_1618 0.71 +0.5 1,679,343 - B158DRAFT_1618 0.72 +0.8 1,679,367 + B158DRAFT_1618 0.73 +0.7 1,679,367 + B158DRAFT_1618 0.73 -0.3 1,679,367 + B158DRAFT_1618 0.73 +1.2 1,679,367 + B158DRAFT_1618 0.73 +0.4 1,679,375 - B158DRAFT_1618 0.74 +0.4 1,679,375 - B158DRAFT_1618 0.74 +1.5 1,679,375 - B158DRAFT_1618 0.74 -0.1 1,679,375 - B158DRAFT_1618 0.74 -0.0 1,679,375 - B158DRAFT_1618 0.74 +0.4 1,679,423 + B158DRAFT_1618 0.77 -0.3 1,679,487 - B158DRAFT_1618 0.82 +0.4 1,679,511 + B158DRAFT_1618 0.84 +0.0 1,679,516 + B158DRAFT_1618 0.84 -0.2 1,679,524 - B158DRAFT_1618 0.85 +0.7 1,679,576 + B158DRAFT_1618 0.88 +0.1 1,679,576 + B158DRAFT_1618 0.88 +0.1 1,679,630 + +0.4 1,679,695 - +0.4 1,679,695 - +0.0 1,679,695 - +0.1 1,679,827 - -0.3 1,679,856 - -0.7 1,679,872 + -0.7 1,679,880 - -0.1 1,679,935 + -0.6 1,679,943 - -0.4 1,679,977 - B158DRAFT_1619 0.12 -0.5 1,679,996 + B158DRAFT_1619 0.13 +0.1 1,680,004 - B158DRAFT_1619 0.14 +0.1 1,680,015 + B158DRAFT_1619 0.14 -0.2 1,680,015 + B158DRAFT_1619 0.14 +0.2 1,680,023 - B158DRAFT_1619 0.15 +0.2 1,680,099 + B158DRAFT_1619 0.19 +0.4 1,680,169 - B158DRAFT_1619 0.24 -0.1 1,680,192 - B158DRAFT_1619 0.25 -0.6 1,680,195 + B158DRAFT_1619 0.25 +0.3 1,680,195 + B158DRAFT_1619 0.25 +0.0 1,680,203 - B158DRAFT_1619 0.26 +0.3 1,680,231 - B158DRAFT_1619 0.28 -0.7 1,680,238 + B158DRAFT_1619 0.28 +0.5 1,680,241 - B158DRAFT_1619 0.28 -0.2 1,680,253 + B158DRAFT_1619 0.29 -0.0 1,680,253 + B158DRAFT_1619 0.29 +0.7 1,680,253 + B158DRAFT_1619 0.29 -1.3 1,680,261 - B158DRAFT_1619 0.29 -0.0 1,680,261 - B158DRAFT_1619 0.29 +0.6 1,680,261 - B158DRAFT_1619 0.29 +0.5 1,680,282 + B158DRAFT_1619 0.31 +0.0 1,680,290 - B158DRAFT_1619 0.31 +0.5 1,680,298 - B158DRAFT_1619 0.32 +0.0 1,680,329 - B158DRAFT_1619 0.34 +0.0 1,680,357 + B158DRAFT_1619 0.35 -0.0 1,680,371 + B158DRAFT_1619 0.36 -0.3 1,680,379 - B158DRAFT_1619 0.37 -0.1 1,680,380 + B158DRAFT_1619 0.37 +0.3 1,680,387 - B158DRAFT_1619 0.37 +0.3 1,680,387 - B158DRAFT_1619 0.37 +0.2 1,680,388 - B158DRAFT_1619 0.37 -0.2 1,680,389 + B158DRAFT_1619 0.37 +0.2 1,680,512 + B158DRAFT_1619 0.45 -0.8 1,680,527 + B158DRAFT_1619 0.46 -0.1 1,680,540 + B158DRAFT_1619 0.47 +0.7 1,680,548 - B158DRAFT_1619 0.47 -0.3 1,680,548 - B158DRAFT_1619 0.47 +0.3 1,680,548 - B158DRAFT_1619 0.47 -0.6 1,680,552 + B158DRAFT_1619 0.48 -0.2 1,680,560 - B158DRAFT_1619 0.48 +0.3 1,680,560 - B158DRAFT_1619 0.48 -0.4 1,680,588 + B158DRAFT_1619 0.50 +0.2 1,680,594 + B158DRAFT_1619 0.50 -0.2 1,680,609 - B158DRAFT_1619 0.51 -0.2 1,680,668 + B158DRAFT_1619 0.55 +0.0 1,680,799 + B158DRAFT_1619 0.63 -1.2 1,680,807 - B158DRAFT_1619 0.63 -0.1 1,680,876 + B158DRAFT_1619 0.68 -0.1 1,680,884 - B158DRAFT_1619 0.68 -0.0 1,680,889 - B158DRAFT_1619 0.68 -0.4 1,680,928 + B158DRAFT_1619 0.71 -0.1 1,680,936 - B158DRAFT_1619 0.71 +0.5 1,680,980 + B158DRAFT_1619 0.74 +0.9 1,680,992 + B158DRAFT_1619 0.75 +0.1 1,680,992 + B158DRAFT_1619 0.75 -0.9 1,680,992 + B158DRAFT_1619 0.75 -0.6 1,681,000 + B158DRAFT_1619 0.75 -0.2 1,681,012 + B158DRAFT_1619 0.76 -0.4 1,681,012 + B158DRAFT_1619 0.76 -0.1 1,681,012 + B158DRAFT_1619 0.76 -0.1 1,681,020 - B158DRAFT_1619 0.77 +0.3 1,681,119 - B158DRAFT_1619 0.83 +0.1 1,681,138 + B158DRAFT_1619 0.84 +0.0 1,681,181 + B158DRAFT_1619 0.86 -0.2 1,681,181 + B158DRAFT_1619 0.86 +0.2 1,681,189 + B158DRAFT_1619 0.87 -0.6 1,681,189 - B158DRAFT_1619 0.87 +0.4 1,681,293 + -0.9 1,681,293 + +0.2 1,681,301 - -0.2 1,681,301 - -1.0 1,681,318 + +0.5 1,681,326 - -1.1 1,681,326 - -0.3 1,681,340 + +0.3 1,681,348 - -0.5 1,681,348 - -1.6 1,681,406 + +0.4 1,681,414 + +0.5 1,681,422 - +0.5 1,681,470 + +0.2 1,681,473 - -1.0 1,681,478 - +0.1 1,681,537 - B158DRAFT_1620 0.12 +0.7 1,681,541 + B158DRAFT_1620 0.12 +0.4 1,681,549 - B158DRAFT_1620 0.13 +0.1 1,681,551 + B158DRAFT_1620 0.13 -0.3 1,681,552 + B158DRAFT_1620 0.13 -0.3 1,681,602 + B158DRAFT_1620 0.18 -0.1 1,681,610 + B158DRAFT_1620 0.18 +0.0 1,681,610 - B158DRAFT_1620 0.18 +0.8 1,681,631 - B158DRAFT_1620 0.20 +0.9 1,681,659 - B158DRAFT_1620 0.23 -0.3 1,681,703 - B158DRAFT_1620 0.27 +0.2 1,681,703 - B158DRAFT_1620 0.27 +0.4 1,681,760 + B158DRAFT_1620 0.32 +0.1 1,681,762 + B158DRAFT_1620 0.32 +0.1 1,681,770 - B158DRAFT_1620 0.33 -0.3 1,681,770 - B158DRAFT_1620 0.33 +0.5 1,681,861 - B158DRAFT_1620 0.41 -0.7 1,681,930 + B158DRAFT_1620 0.47 -0.9 1,682,009 - B158DRAFT_1620 0.54 -0.5 1,682,053 + B158DRAFT_1620 0.58 -0.1 1,682,061 - B158DRAFT_1620 0.59 +1.0 1,682,087 - B158DRAFT_1620 0.62 -0.4 1,682,098 + B158DRAFT_1620 0.62 -1.9 1,682,213 + B158DRAFT_1620 0.73 -0.7 1,682,221 - B158DRAFT_1620 0.74 +0.2 1,682,254 + B158DRAFT_1620 0.77 -0.0 1,682,262 - B158DRAFT_1620 0.77 +0.2 1,682,319 + B158DRAFT_1620 0.83 -1.3
Or see this region's nucleotide sequence