Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1269 and B158DRAFT_1270 are separated by 371 nucleotides B158DRAFT_1270 and B158DRAFT_1271 are separated by 344 nucleotides B158DRAFT_1271 and B158DRAFT_1272 are separated by 105 nucleotides
B158DRAFT_1269: B158DRAFT_1269 - Type III restriction enzyme, res subunit., at 1,308,035 to 1,311,379
_1269
B158DRAFT_1270: B158DRAFT_1270 - Outer membrane receptor proteins, mostly Fe transport, at 1,311,751 to 1,313,817
_1270
B158DRAFT_1271: B158DRAFT_1271 - hypothetical protein, at 1,314,162 to 1,314,695
_1271
B158DRAFT_1272: B158DRAFT_1272 - two component transcriptional regulator, LuxR family, at 1,314,801 to 1,315,439
_1272
Position (kb)
1311
1312
1313
1314 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1310.807 kb on + strand, within B158DRAFT_1269 at 1310.970 kb on - strand, within B158DRAFT_1269 at 1310.970 kb on - strand, within B158DRAFT_1269 at 1310.973 kb on + strand, within B158DRAFT_1269 at 1310.987 kb on + strand, within B158DRAFT_1269 at 1311.043 kb on + strand, within B158DRAFT_1269 at 1311.044 kb on + strand, within B158DRAFT_1269 at 1311.044 kb on + strand, within B158DRAFT_1269 at 1311.044 kb on + strand, within B158DRAFT_1269 at 1311.052 kb on - strand at 1311.052 kb on - strand at 1311.052 kb on - strand at 1311.052 kb on - strand at 1311.111 kb on - strand at 1311.113 kb on + strand at 1311.121 kb on - strand at 1311.121 kb on - strand at 1311.121 kb on - strand at 1311.232 kb on - strand at 1311.507 kb on + strand at 1311.552 kb on + strand at 1311.804 kb on + strand at 1311.812 kb on - strand at 1311.834 kb on + strand at 1311.857 kb on - strand at 1311.864 kb on + strand at 1311.931 kb on - strand at 1311.959 kb on + strand, within B158DRAFT_1270 at 1311.992 kb on + strand, within B158DRAFT_1270 at 1312.045 kb on - strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.087 kb on + strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.095 kb on - strand, within B158DRAFT_1270 at 1312.112 kb on + strand, within B158DRAFT_1270 at 1312.120 kb on - strand, within B158DRAFT_1270 at 1312.200 kb on - strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.211 kb on + strand, within B158DRAFT_1270 at 1312.219 kb on - strand, within B158DRAFT_1270 at 1312.219 kb on - strand, within B158DRAFT_1270 at 1312.237 kb on + strand, within B158DRAFT_1270 at 1312.245 kb on - strand, within B158DRAFT_1270 at 1312.275 kb on + strand, within B158DRAFT_1270 at 1312.363 kb on + strand, within B158DRAFT_1270 at 1312.363 kb on + strand, within B158DRAFT_1270 at 1312.363 kb on + strand, within B158DRAFT_1270 at 1312.363 kb on + strand, within B158DRAFT_1270 at 1312.363 kb on + strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.371 kb on - strand, within B158DRAFT_1270 at 1312.388 kb on - strand, within B158DRAFT_1270 at 1312.411 kb on + strand, within B158DRAFT_1270 at 1312.419 kb on - strand, within B158DRAFT_1270 at 1312.423 kb on + strand, within B158DRAFT_1270 at 1312.424 kb on - strand, within B158DRAFT_1270 at 1312.546 kb on - strand, within B158DRAFT_1270 at 1312.557 kb on + strand, within B158DRAFT_1270 at 1312.584 kb on + strand, within B158DRAFT_1270 at 1312.627 kb on - strand, within B158DRAFT_1270 at 1312.664 kb on - strand, within B158DRAFT_1270 at 1312.690 kb on - strand, within B158DRAFT_1270 at 1312.690 kb on - strand, within B158DRAFT_1270 at 1312.702 kb on - strand, within B158DRAFT_1270 at 1312.708 kb on + strand, within B158DRAFT_1270 at 1312.708 kb on + strand, within B158DRAFT_1270 at 1312.726 kb on - strand, within B158DRAFT_1270 at 1312.832 kb on + strand, within B158DRAFT_1270 at 1312.874 kb on + strand, within B158DRAFT_1270 at 1312.882 kb on - strand, within B158DRAFT_1270 at 1312.895 kb on - strand, within B158DRAFT_1270 at 1312.899 kb on - strand, within B158DRAFT_1270 at 1312.924 kb on - strand, within B158DRAFT_1270 at 1312.938 kb on + strand, within B158DRAFT_1270 at 1312.970 kb on + strand, within B158DRAFT_1270 at 1312.978 kb on - strand, within B158DRAFT_1270 at 1313.038 kb on - strand, within B158DRAFT_1270 at 1313.101 kb on - strand, within B158DRAFT_1270 at 1313.210 kb on + strand, within B158DRAFT_1270 at 1313.231 kb on + strand, within B158DRAFT_1270 at 1313.231 kb on + strand, within B158DRAFT_1270 at 1313.265 kb on + strand, within B158DRAFT_1270 at 1313.265 kb on + strand, within B158DRAFT_1270 at 1313.273 kb on - strand, within B158DRAFT_1270 at 1313.309 kb on + strand, within B158DRAFT_1270 at 1313.344 kb on - strand, within B158DRAFT_1270 at 1313.357 kb on + strand, within B158DRAFT_1270 at 1313.363 kb on - strand, within B158DRAFT_1270 at 1313.379 kb on - strand, within B158DRAFT_1270 at 1313.441 kb on + strand, within B158DRAFT_1270 at 1313.441 kb on + strand, within B158DRAFT_1270 at 1313.526 kb on - strand, within B158DRAFT_1270 at 1313.559 kb on + strand, within B158DRAFT_1270 at 1313.559 kb on + strand, within B158DRAFT_1270 at 1313.559 kb on + strand, within B158DRAFT_1270 at 1313.559 kb on + strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.567 kb on - strand, within B158DRAFT_1270 at 1313.623 kb on + strand at 1313.631 kb on - strand at 1313.724 kb on + strand at 1313.726 kb on - strand at 1313.753 kb on + strand at 1313.798 kb on + strand at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.861 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.866 kb on + strand at 1313.867 kb on + strand at 1313.874 kb on - strand at 1313.874 kb on - strand at 1313.875 kb on - strand at 1313.930 kb on - strand at 1314.025 kb on + strand at 1314.025 kb on + strand at 1314.090 kb on + strand at 1314.090 kb on + strand at 1314.137 kb on + strand at 1314.139 kb on - strand at 1314.199 kb on - strand at 1314.222 kb on - strand, within B158DRAFT_1271 at 1314.225 kb on + strand, within B158DRAFT_1271 at 1314.231 kb on + strand, within B158DRAFT_1271 at 1314.368 kb on + strand, within B158DRAFT_1271 at 1314.405 kb on - strand, within B158DRAFT_1271 at 1314.481 kb on + strand, within B158DRAFT_1271 at 1314.485 kb on + strand, within B158DRAFT_1271 at 1314.529 kb on + strand, within B158DRAFT_1271 at 1314.535 kb on + strand, within B158DRAFT_1271 at 1314.553 kb on - strand, within B158DRAFT_1271 at 1314.569 kb on + strand, within B158DRAFT_1271 at 1314.577 kb on - strand, within B158DRAFT_1271 at 1314.625 kb on + strand, within B158DRAFT_1271 at 1314.637 kb on + strand, within B158DRAFT_1271 at 1314.712 kb on - strand at 1314.721 kb on - strand at 1314.792 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,310,807 + B158DRAFT_1269 0.83 -0.1 1,310,970 - B158DRAFT_1269 0.88 -0.3 1,310,970 - B158DRAFT_1269 0.88 -0.7 1,310,973 + B158DRAFT_1269 0.88 -1.1 1,310,987 + B158DRAFT_1269 0.88 -0.1 1,311,043 + B158DRAFT_1269 0.90 -0.1 1,311,044 + B158DRAFT_1269 0.90 -0.4 1,311,044 + B158DRAFT_1269 0.90 -0.3 1,311,044 + B158DRAFT_1269 0.90 -0.1 1,311,052 - -0.5 1,311,052 - -0.4 1,311,052 - -0.1 1,311,052 - -0.1 1,311,111 - +0.4 1,311,113 + -0.1 1,311,121 - -0.4 1,311,121 - -0.0 1,311,121 - -0.7 1,311,232 - -0.4 1,311,507 + -0.2 1,311,552 + -0.2 1,311,804 + -1.3 1,311,812 - -2.0 1,311,834 + -2.2 1,311,857 - -1.2 1,311,864 + -0.0 1,311,931 - -1.0 1,311,959 + B158DRAFT_1270 0.10 -1.3 1,311,992 + B158DRAFT_1270 0.12 -2.4 1,312,045 - B158DRAFT_1270 0.14 -0.9 1,312,087 + B158DRAFT_1270 0.16 -1.2 1,312,087 + B158DRAFT_1270 0.16 -2.2 1,312,087 + B158DRAFT_1270 0.16 -1.5 1,312,087 + B158DRAFT_1270 0.16 -1.6 1,312,087 + B158DRAFT_1270 0.16 -1.9 1,312,087 + B158DRAFT_1270 0.16 -1.9 1,312,087 + B158DRAFT_1270 0.16 -1.1 1,312,087 + B158DRAFT_1270 0.16 -1.4 1,312,087 + B158DRAFT_1270 0.16 -1.1 1,312,095 - B158DRAFT_1270 0.17 -0.6 1,312,095 - B158DRAFT_1270 0.17 -1.2 1,312,095 - B158DRAFT_1270 0.17 -1.1 1,312,095 - B158DRAFT_1270 0.17 -1.8 1,312,095 - B158DRAFT_1270 0.17 -1.3 1,312,095 - B158DRAFT_1270 0.17 -1.0 1,312,095 - B158DRAFT_1270 0.17 -3.4 1,312,095 - B158DRAFT_1270 0.17 -0.5 1,312,095 - B158DRAFT_1270 0.17 -1.4 1,312,095 - B158DRAFT_1270 0.17 -1.4 1,312,095 - B158DRAFT_1270 0.17 -1.1 1,312,112 + B158DRAFT_1270 0.17 -1.4 1,312,120 - B158DRAFT_1270 0.18 -0.7 1,312,200 - B158DRAFT_1270 0.22 -0.8 1,312,211 + B158DRAFT_1270 0.22 -1.2 1,312,211 + B158DRAFT_1270 0.22 -0.6 1,312,211 + B158DRAFT_1270 0.22 -1.4 1,312,211 + B158DRAFT_1270 0.22 -1.6 1,312,211 + B158DRAFT_1270 0.22 -1.8 1,312,211 + B158DRAFT_1270 0.22 -1.0 1,312,211 + B158DRAFT_1270 0.22 -1.8 1,312,211 + B158DRAFT_1270 0.22 -1.9 1,312,211 + B158DRAFT_1270 0.22 -1.3 1,312,219 - B158DRAFT_1270 0.23 -1.2 1,312,219 - B158DRAFT_1270 0.23 -2.5 1,312,237 + B158DRAFT_1270 0.24 -0.8 1,312,245 - B158DRAFT_1270 0.24 -0.2 1,312,275 + B158DRAFT_1270 0.25 -1.2 1,312,363 + B158DRAFT_1270 0.30 -1.7 1,312,363 + B158DRAFT_1270 0.30 -1.9 1,312,363 + B158DRAFT_1270 0.30 -1.8 1,312,363 + B158DRAFT_1270 0.30 -1.1 1,312,363 + B158DRAFT_1270 0.30 -0.8 1,312,371 - B158DRAFT_1270 0.30 -1.7 1,312,371 - B158DRAFT_1270 0.30 -1.9 1,312,371 - B158DRAFT_1270 0.30 -1.6 1,312,371 - B158DRAFT_1270 0.30 -1.5 1,312,371 - B158DRAFT_1270 0.30 -1.4 1,312,371 - B158DRAFT_1270 0.30 -0.5 1,312,371 - B158DRAFT_1270 0.30 +0.4 1,312,371 - B158DRAFT_1270 0.30 -0.6 1,312,388 - B158DRAFT_1270 0.31 -1.3 1,312,411 + B158DRAFT_1270 0.32 -2.2 1,312,419 - B158DRAFT_1270 0.32 -1.5 1,312,423 + B158DRAFT_1270 0.33 -1.3 1,312,424 - B158DRAFT_1270 0.33 -1.2 1,312,546 - B158DRAFT_1270 0.38 -0.9 1,312,557 + B158DRAFT_1270 0.39 -1.6 1,312,584 + B158DRAFT_1270 0.40 -0.0 1,312,627 - B158DRAFT_1270 0.42 -1.8 1,312,664 - B158DRAFT_1270 0.44 -0.6 1,312,690 - B158DRAFT_1270 0.45 -2.1 1,312,690 - B158DRAFT_1270 0.45 -1.4 1,312,702 - B158DRAFT_1270 0.46 -1.2 1,312,708 + B158DRAFT_1270 0.46 -1.8 1,312,708 + B158DRAFT_1270 0.46 -1.1 1,312,726 - B158DRAFT_1270 0.47 -1.7 1,312,832 + B158DRAFT_1270 0.52 -1.3 1,312,874 + B158DRAFT_1270 0.54 -1.3 1,312,882 - B158DRAFT_1270 0.55 -1.3 1,312,895 - B158DRAFT_1270 0.55 -2.0 1,312,899 - B158DRAFT_1270 0.56 -1.5 1,312,924 - B158DRAFT_1270 0.57 -1.3 1,312,938 + B158DRAFT_1270 0.57 -1.2 1,312,970 + B158DRAFT_1270 0.59 -1.5 1,312,978 - B158DRAFT_1270 0.59 -1.5 1,313,038 - B158DRAFT_1270 0.62 -1.4 1,313,101 - B158DRAFT_1270 0.65 -0.9 1,313,210 + B158DRAFT_1270 0.71 -1.7 1,313,231 + B158DRAFT_1270 0.72 -1.3 1,313,231 + B158DRAFT_1270 0.72 -1.1 1,313,265 + B158DRAFT_1270 0.73 -2.6 1,313,265 + B158DRAFT_1270 0.73 -1.3 1,313,273 - B158DRAFT_1270 0.74 -2.8 1,313,309 + B158DRAFT_1270 0.75 -1.7 1,313,344 - B158DRAFT_1270 0.77 -0.7 1,313,357 + B158DRAFT_1270 0.78 -1.1 1,313,363 - B158DRAFT_1270 0.78 -1.5 1,313,379 - B158DRAFT_1270 0.79 -1.1 1,313,441 + B158DRAFT_1270 0.82 -1.4 1,313,441 + B158DRAFT_1270 0.82 -0.4 1,313,526 - B158DRAFT_1270 0.86 -1.4 1,313,559 + B158DRAFT_1270 0.87 -1.8 1,313,559 + B158DRAFT_1270 0.87 -1.0 1,313,559 + B158DRAFT_1270 0.87 -1.2 1,313,559 + B158DRAFT_1270 0.87 -2.0 1,313,567 - B158DRAFT_1270 0.88 -2.3 1,313,567 - B158DRAFT_1270 0.88 -2.2 1,313,567 - B158DRAFT_1270 0.88 -2.3 1,313,567 - B158DRAFT_1270 0.88 -0.2 1,313,567 - B158DRAFT_1270 0.88 -1.7 1,313,567 - B158DRAFT_1270 0.88 -1.2 1,313,567 - B158DRAFT_1270 0.88 -2.1 1,313,567 - B158DRAFT_1270 0.88 -1.6 1,313,567 - B158DRAFT_1270 0.88 -2.4 1,313,567 - B158DRAFT_1270 0.88 -1.9 1,313,567 - B158DRAFT_1270 0.88 -1.6 1,313,623 + -2.8 1,313,631 - -1.2 1,313,724 + -1.8 1,313,726 - -1.7 1,313,753 + -2.9 1,313,798 + -1.5 1,313,861 + +0.6 1,313,861 + +0.6 1,313,861 + +0.5 1,313,861 + -0.3 1,313,866 + +0.2 1,313,866 + -0.2 1,313,866 + +0.3 1,313,866 + +0.2 1,313,866 + +0.2 1,313,867 + +0.5 1,313,874 - +0.2 1,313,874 - +0.1 1,313,875 - -0.2 1,313,930 - +0.0 1,314,025 + +0.0 1,314,025 + +0.1 1,314,090 + +0.2 1,314,090 + -0.4 1,314,137 + +0.2 1,314,139 - +0.8 1,314,199 - +0.2 1,314,222 - B158DRAFT_1271 0.11 +0.6 1,314,225 + B158DRAFT_1271 0.12 +0.1 1,314,231 + B158DRAFT_1271 0.13 +0.3 1,314,368 + B158DRAFT_1271 0.39 +2.4 1,314,405 - B158DRAFT_1271 0.46 -0.6 1,314,481 + B158DRAFT_1271 0.60 +0.2 1,314,485 + B158DRAFT_1271 0.60 -0.2 1,314,529 + B158DRAFT_1271 0.69 +0.3 1,314,535 + B158DRAFT_1271 0.70 -0.1 1,314,553 - B158DRAFT_1271 0.73 -0.3 1,314,569 + B158DRAFT_1271 0.76 +0.7 1,314,577 - B158DRAFT_1271 0.78 -0.1 1,314,625 + B158DRAFT_1271 0.87 +0.1 1,314,637 + B158DRAFT_1271 0.89 +0.0 1,314,712 - +0.0 1,314,721 - -0.0 1,314,792 - -1.4
Or see this region's nucleotide sequence