Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1229 and B158DRAFT_1230 are separated by 1 nucleotides B158DRAFT_1230 and B158DRAFT_1231 are separated by 56 nucleotides B158DRAFT_1231 and B158DRAFT_1232 are separated by 250 nucleotides B158DRAFT_1232 and B158DRAFT_1233 are separated by 325 nucleotides
B158DRAFT_1229: B158DRAFT_1229 - Uncharacterized conserved protein, at 1,268,525 to 1,269,235
_1229
B158DRAFT_1230: B158DRAFT_1230 - Glycerophosphoryl diester phosphodiesterase, at 1,269,237 to 1,269,917
_1230
B158DRAFT_1231: B158DRAFT_1231 - bacterioferritin, at 1,269,974 to 1,270,453
_1231
B158DRAFT_1232: B158DRAFT_1232 - Bacterioferritin-associated ferredoxin, at 1,270,704 to 1,270,934
_1232
B158DRAFT_1233: B158DRAFT_1233 - Multimeric flavodoxin WrbA, at 1,271,260 to 1,271,826
_1233
Position (kb)
1269
1270
1271 Strain fitness (log2 ratio)
-2
-1
0
1 at 1269.053 kb on - strand, within B158DRAFT_1229 at 1269.225 kb on + strand at 1269.233 kb on - strand at 1269.243 kb on + strand at 1269.243 kb on - strand at 1269.267 kb on + strand at 1269.269 kb on - strand at 1269.276 kb on + strand at 1269.276 kb on + strand at 1269.284 kb on - strand at 1269.288 kb on + strand at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.306 kb on + strand, within B158DRAFT_1230 at 1269.307 kb on + strand, within B158DRAFT_1230 at 1269.334 kb on + strand, within B158DRAFT_1230 at 1269.419 kb on - strand, within B158DRAFT_1230 at 1269.432 kb on + strand, within B158DRAFT_1230 at 1269.448 kb on - strand, within B158DRAFT_1230 at 1269.468 kb on + strand, within B158DRAFT_1230 at 1269.473 kb on + strand, within B158DRAFT_1230 at 1269.476 kb on - strand, within B158DRAFT_1230 at 1269.533 kb on + strand, within B158DRAFT_1230 at 1269.542 kb on + strand, within B158DRAFT_1230 at 1269.701 kb on + strand, within B158DRAFT_1230 at 1269.701 kb on + strand, within B158DRAFT_1230 at 1269.719 kb on - strand, within B158DRAFT_1230 at 1269.719 kb on - strand, within B158DRAFT_1230 at 1269.736 kb on - strand, within B158DRAFT_1230 at 1269.757 kb on + strand, within B158DRAFT_1230 at 1269.762 kb on + strand, within B158DRAFT_1230 at 1269.762 kb on + strand, within B158DRAFT_1230 at 1269.765 kb on - strand, within B158DRAFT_1230 at 1269.770 kb on - strand, within B158DRAFT_1230 at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.854 kb on + strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.862 kb on - strand at 1269.901 kb on + strand at 1269.909 kb on - strand at 1269.909 kb on - strand at 1269.910 kb on - strand at 1269.910 kb on - strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.939 kb on + strand at 1269.947 kb on - strand at 1269.947 kb on - strand at 1269.952 kb on - strand at 1269.952 kb on - strand at 1270.099 kb on + strand, within B158DRAFT_1231 at 1270.099 kb on + strand, within B158DRAFT_1231 at 1270.107 kb on - strand, within B158DRAFT_1231 at 1270.107 kb on - strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.135 kb on + strand, within B158DRAFT_1231 at 1270.141 kb on - strand, within B158DRAFT_1231 at 1270.143 kb on - strand, within B158DRAFT_1231 at 1270.215 kb on + strand, within B158DRAFT_1231 at 1270.237 kb on - strand, within B158DRAFT_1231 at 1270.347 kb on - strand, within B158DRAFT_1231 at 1270.414 kb on - strand at 1270.496 kb on + strand at 1270.524 kb on - strand at 1270.524 kb on - strand at 1270.711 kb on + strand at 1270.737 kb on + strand, within B158DRAFT_1232 at 1270.745 kb on - strand, within B158DRAFT_1232 at 1270.754 kb on - strand, within B158DRAFT_1232 at 1270.763 kb on + strand, within B158DRAFT_1232 at 1270.766 kb on - strand, within B158DRAFT_1232 at 1270.849 kb on - strand, within B158DRAFT_1232 at 1270.875 kb on + strand, within B158DRAFT_1232 at 1270.875 kb on + strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.883 kb on - strand, within B158DRAFT_1232 at 1270.906 kb on + strand, within B158DRAFT_1232 at 1270.922 kb on + strand at 1271.297 kb on + strand at 1271.297 kb on + strand at 1271.338 kb on - strand, within B158DRAFT_1233 at 1271.341 kb on - strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.347 kb on + strand, within B158DRAFT_1233 at 1271.348 kb on - strand, within B158DRAFT_1233 at 1271.355 kb on - strand, within B158DRAFT_1233 at 1271.355 kb on - strand, within B158DRAFT_1233 at 1271.355 kb on - strand, within B158DRAFT_1233 at 1271.355 kb on - strand, within B158DRAFT_1233 at 1271.357 kb on + strand, within B158DRAFT_1233 at 1271.357 kb on + strand, within B158DRAFT_1233 at 1271.362 kb on + strand, within B158DRAFT_1233 at 1271.365 kb on - strand, within B158DRAFT_1233 at 1271.365 kb on - strand, within B158DRAFT_1233 at 1271.365 kb on - strand, within B158DRAFT_1233 at 1271.365 kb on - strand, within B158DRAFT_1233 at 1271.365 kb on - strand, within B158DRAFT_1233 at 1271.370 kb on - strand, within B158DRAFT_1233 at 1271.370 kb on - strand, within B158DRAFT_1233 at 1271.390 kb on - strand, within B158DRAFT_1233 at 1271.396 kb on + strand, within B158DRAFT_1233 at 1271.396 kb on + strand, within B158DRAFT_1233 at 1271.397 kb on - strand, within B158DRAFT_1233 at 1271.404 kb on - strand, within B158DRAFT_1233 at 1271.404 kb on - strand, within B158DRAFT_1233 at 1271.414 kb on - strand, within B158DRAFT_1233 at 1271.428 kb on + strand, within B158DRAFT_1233 at 1271.428 kb on + strand, within B158DRAFT_1233 at 1271.451 kb on + strand, within B158DRAFT_1233 at 1271.451 kb on + strand, within B158DRAFT_1233
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 1,269,053 - B158DRAFT_1229 0.74 -2.0 1,269,225 + -0.4 1,269,233 - -0.5 1,269,243 + -0.3 1,269,243 - -0.1 1,269,267 + -0.5 1,269,269 - -0.1 1,269,276 + +0.1 1,269,276 + -0.2 1,269,284 - +0.4 1,269,288 + -0.4 1,269,306 + B158DRAFT_1230 0.10 -0.3 1,269,306 + B158DRAFT_1230 0.10 -0.1 1,269,307 + B158DRAFT_1230 0.10 +0.0 1,269,334 + B158DRAFT_1230 0.14 -0.1 1,269,419 - B158DRAFT_1230 0.27 +0.1 1,269,432 + B158DRAFT_1230 0.29 -0.7 1,269,448 - B158DRAFT_1230 0.31 +0.0 1,269,468 + B158DRAFT_1230 0.34 +0.2 1,269,473 + B158DRAFT_1230 0.35 -0.3 1,269,476 - B158DRAFT_1230 0.35 +0.7 1,269,533 + B158DRAFT_1230 0.43 -1.4 1,269,542 + B158DRAFT_1230 0.45 -0.6 1,269,701 + B158DRAFT_1230 0.68 +0.7 1,269,701 + B158DRAFT_1230 0.68 +0.1 1,269,719 - B158DRAFT_1230 0.71 -0.3 1,269,719 - B158DRAFT_1230 0.71 -0.1 1,269,736 - B158DRAFT_1230 0.73 +0.0 1,269,757 + B158DRAFT_1230 0.76 -0.5 1,269,762 + B158DRAFT_1230 0.77 -0.4 1,269,762 + B158DRAFT_1230 0.77 -0.2 1,269,765 - B158DRAFT_1230 0.78 -0.0 1,269,770 - B158DRAFT_1230 0.78 -0.3 1,269,854 + +0.2 1,269,854 + -0.2 1,269,854 + -1.0 1,269,854 + -0.1 1,269,854 + +0.0 1,269,854 + -1.0 1,269,854 + -0.2 1,269,854 + -0.2 1,269,854 + -1.2 1,269,854 + +0.0 1,269,854 + -0.2 1,269,854 + -0.3 1,269,854 + +0.7 1,269,854 + -0.1 1,269,854 + -0.4 1,269,854 + -0.1 1,269,862 - -0.6 1,269,862 - +0.4 1,269,862 - -0.0 1,269,862 - +0.6 1,269,862 - +0.0 1,269,862 - -0.2 1,269,862 - -0.0 1,269,862 - -0.0 1,269,862 - +0.1 1,269,862 - -0.9 1,269,862 - -0.7 1,269,862 - -0.1 1,269,862 - -0.3 1,269,901 + -0.1 1,269,909 - +0.1 1,269,909 - -1.2 1,269,910 - -0.1 1,269,910 - -0.4 1,269,939 + +0.2 1,269,939 + +1.4 1,269,939 + -0.7 1,269,939 + -0.4 1,269,939 + +0.2 1,269,939 + -0.0 1,269,947 - -0.4 1,269,947 - +0.1 1,269,952 - +0.2 1,269,952 - +0.1 1,270,099 + B158DRAFT_1231 0.26 -0.6 1,270,099 + B158DRAFT_1231 0.26 +0.2 1,270,107 - B158DRAFT_1231 0.28 -0.3 1,270,107 - B158DRAFT_1231 0.28 -1.4 1,270,135 + B158DRAFT_1231 0.34 +0.3 1,270,135 + B158DRAFT_1231 0.34 -0.3 1,270,135 + B158DRAFT_1231 0.34 -0.2 1,270,135 + B158DRAFT_1231 0.34 -0.6 1,270,141 - B158DRAFT_1231 0.35 -0.4 1,270,143 - B158DRAFT_1231 0.35 +0.0 1,270,215 + B158DRAFT_1231 0.50 +0.2 1,270,237 - B158DRAFT_1231 0.55 +0.5 1,270,347 - B158DRAFT_1231 0.78 -0.5 1,270,414 - +0.2 1,270,496 + -0.6 1,270,524 - +0.6 1,270,524 - -0.3 1,270,711 + -0.3 1,270,737 + B158DRAFT_1232 0.14 +0.0 1,270,745 - B158DRAFT_1232 0.18 -0.3 1,270,754 - B158DRAFT_1232 0.22 -0.3 1,270,763 + B158DRAFT_1232 0.26 +0.2 1,270,766 - B158DRAFT_1232 0.27 -0.0 1,270,849 - B158DRAFT_1232 0.63 +0.2 1,270,875 + B158DRAFT_1232 0.74 +0.3 1,270,875 + B158DRAFT_1232 0.74 +0.6 1,270,883 - B158DRAFT_1232 0.77 -0.2 1,270,883 - B158DRAFT_1232 0.77 -0.5 1,270,883 - B158DRAFT_1232 0.77 +0.4 1,270,883 - B158DRAFT_1232 0.77 +0.1 1,270,883 - B158DRAFT_1232 0.77 -0.4 1,270,883 - B158DRAFT_1232 0.77 +0.4 1,270,883 - B158DRAFT_1232 0.77 +0.7 1,270,906 + B158DRAFT_1232 0.87 +0.4 1,270,922 + +0.1 1,271,297 + +0.3 1,271,297 + -0.2 1,271,338 - B158DRAFT_1233 0.14 +0.2 1,271,341 - B158DRAFT_1233 0.14 -0.2 1,271,347 + B158DRAFT_1233 0.15 -0.7 1,271,347 + B158DRAFT_1233 0.15 -0.1 1,271,347 + B158DRAFT_1233 0.15 +0.1 1,271,347 + B158DRAFT_1233 0.15 -0.3 1,271,347 + B158DRAFT_1233 0.15 +0.4 1,271,347 + B158DRAFT_1233 0.15 -0.3 1,271,347 + B158DRAFT_1233 0.15 -0.4 1,271,347 + B158DRAFT_1233 0.15 -0.3 1,271,348 - B158DRAFT_1233 0.16 -0.1 1,271,355 - B158DRAFT_1233 0.17 -0.2 1,271,355 - B158DRAFT_1233 0.17 -0.3 1,271,355 - B158DRAFT_1233 0.17 -0.4 1,271,355 - B158DRAFT_1233 0.17 -0.0 1,271,357 + B158DRAFT_1233 0.17 +0.0 1,271,357 + B158DRAFT_1233 0.17 -0.4 1,271,362 + B158DRAFT_1233 0.18 -0.1 1,271,365 - B158DRAFT_1233 0.19 +0.0 1,271,365 - B158DRAFT_1233 0.19 -0.2 1,271,365 - B158DRAFT_1233 0.19 -0.2 1,271,365 - B158DRAFT_1233 0.19 +0.7 1,271,365 - B158DRAFT_1233 0.19 +0.6 1,271,370 - B158DRAFT_1233 0.19 +0.2 1,271,370 - B158DRAFT_1233 0.19 -0.0 1,271,390 - B158DRAFT_1233 0.23 -0.3 1,271,396 + B158DRAFT_1233 0.24 +0.1 1,271,396 + B158DRAFT_1233 0.24 +1.1 1,271,397 - B158DRAFT_1233 0.24 -0.4 1,271,404 - B158DRAFT_1233 0.25 -0.4 1,271,404 - B158DRAFT_1233 0.25 +0.5 1,271,414 - B158DRAFT_1233 0.27 -0.2 1,271,428 + B158DRAFT_1233 0.30 -0.0 1,271,428 + B158DRAFT_1233 0.30 +0.3 1,271,451 + B158DRAFT_1233 0.34 +0.2 1,271,451 + B158DRAFT_1233 0.34 -0.0
Or see this region's nucleotide sequence