Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0705

Experiment: m.b. Nickel (II) chloride 1.25 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0704 and B158DRAFT_0705 are separated by 28 nucleotidesB158DRAFT_0705 and B158DRAFT_0706 overlap by 14 nucleotides B158DRAFT_0704: B158DRAFT_0704 - C-terminal peptidase (prc), at 704,476 to 705,723 _0704 B158DRAFT_0705: B158DRAFT_0705 - Membrane-bound metallopeptidase, at 705,752 to 706,927 _0705 B158DRAFT_0706: B158DRAFT_0706 - phosphoglycerate mutase (EC 5.4.2.1), at 706,914 to 708,449 _0706 Position (kb) 705 706 707Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 704.757 kb on - strand, within B158DRAFT_0704at 704.890 kb on - strand, within B158DRAFT_0704at 704.905 kb on - strand, within B158DRAFT_0704at 705.069 kb on - strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.455 kb on + strand, within B158DRAFT_0704at 705.482 kb on + strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.492 kb on + strand, within B158DRAFT_0704at 705.639 kb on + strandat 705.654 kb on - strandat 705.682 kb on - strandat 705.703 kb on + strandat 705.711 kb on - strandat 705.717 kb on + strandat 705.817 kb on + strandat 705.842 kb on - strandat 705.865 kb on + strandat 705.921 kb on + strand, within B158DRAFT_0705at 705.934 kb on - strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.958 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.999 kb on + strand, within B158DRAFT_0705at 706.100 kb on + strand, within B158DRAFT_0705at 706.144 kb on - strand, within B158DRAFT_0705at 706.171 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.326 kb on - strand, within B158DRAFT_0705at 706.358 kb on + strand, within B158DRAFT_0705at 706.402 kb on + strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.621 kb on - strand, within B158DRAFT_0705at 706.622 kb on - strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.870 kb on + strandat 706.877 kb on + strandat 706.929 kb on + strandat 706.929 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM
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704,757 - B158DRAFT_0704 0.23 -3.0
704,890 - B158DRAFT_0704 0.33 -2.2
704,905 - B158DRAFT_0704 0.34 -1.9
705,069 - B158DRAFT_0704 0.48 -2.7
705,200 + B158DRAFT_0704 0.58 -3.0
705,200 + B158DRAFT_0704 0.58 -2.0
705,208 - B158DRAFT_0704 0.59 -3.8
705,208 - B158DRAFT_0704 0.59 -1.6
705,208 - B158DRAFT_0704 0.59 -2.5
705,208 - B158DRAFT_0704 0.59 -3.0
705,455 + B158DRAFT_0704 0.78 -4.6
705,482 + B158DRAFT_0704 0.81 -4.0
705,484 - B158DRAFT_0704 0.81 -3.5
705,484 - B158DRAFT_0704 0.81 -3.1
705,490 - B158DRAFT_0704 0.81 -1.6
705,490 - B158DRAFT_0704 0.81 -1.0
705,490 - B158DRAFT_0704 0.81 -2.7
705,492 + B158DRAFT_0704 0.81 -3.0
705,639 + -1.0
705,654 - -3.9
705,682 - -3.2
705,703 + -3.6
705,711 - -3.2
705,717 + -5.4
705,817 + -1.4
705,842 - -0.0
705,865 + -1.4
705,921 + B158DRAFT_0705 0.14 -3.0
705,934 - B158DRAFT_0705 0.15 -0.6
705,955 + B158DRAFT_0705 0.17 -1.6
705,955 + B158DRAFT_0705 0.17 -3.4
705,955 + B158DRAFT_0705 0.17 -4.6
705,955 + B158DRAFT_0705 0.17 -1.4
705,955 + B158DRAFT_0705 0.17 -2.0
705,958 - B158DRAFT_0705 0.18 +0.9
705,963 - B158DRAFT_0705 0.18 -0.4
705,963 - B158DRAFT_0705 0.18 -0.5
705,963 - B158DRAFT_0705 0.18 -1.5
705,963 - B158DRAFT_0705 0.18 +0.4
705,963 - B158DRAFT_0705 0.18 +0.6
705,963 - B158DRAFT_0705 0.18 +0.1
705,999 + B158DRAFT_0705 0.21 +0.4
706,100 + B158DRAFT_0705 0.30 +1.0
706,144 - B158DRAFT_0705 0.33 +0.8
706,171 + B158DRAFT_0705 0.36 +1.2
706,294 + B158DRAFT_0705 0.46 +1.1
706,294 + B158DRAFT_0705 0.46 +0.7
706,294 + B158DRAFT_0705 0.46 +1.0
706,294 + B158DRAFT_0705 0.46 +1.6
706,326 - B158DRAFT_0705 0.49 +1.3
706,358 + B158DRAFT_0705 0.52 +0.6
706,402 + B158DRAFT_0705 0.55 +0.7
706,410 - B158DRAFT_0705 0.56 +1.5
706,410 - B158DRAFT_0705 0.56 +0.7
706,621 - B158DRAFT_0705 0.74 +1.0
706,622 - B158DRAFT_0705 0.74 +0.1
706,672 + B158DRAFT_0705 0.78 +1.4
706,672 + B158DRAFT_0705 0.78 +0.0
706,680 - B158DRAFT_0705 0.79 +0.8
706,680 - B158DRAFT_0705 0.79 +0.8
706,870 + +1.0
706,877 + +0.3
706,929 + +0.6
706,929 + +0.4

Or see this region's nucleotide sequence