Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0685 and B158DRAFT_0686 overlap by 4 nucleotides B158DRAFT_0686 and B158DRAFT_0687 are separated by 37 nucleotides B158DRAFT_0687 and B158DRAFT_0688 are separated by 140 nucleotides
B158DRAFT_0685: B158DRAFT_0685 - Signal transduction histidine kinase, at 686,551 to 687,855
_0685
B158DRAFT_0686: B158DRAFT_0686 - Disulfide bond chaperones of the HSP33 family, at 687,852 to 688,724
_0686
B158DRAFT_0687: B158DRAFT_0687 - heat shock protein Hsp15, at 688,762 to 689,148
_0687
B158DRAFT_0688: B158DRAFT_0688 - type II secretion system protein C (GspC), at 689,289 to 690,242
_0688
Position (kb) 688
689
690 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 687.780 kb on - strand at 687.840 kb on + strand at 687.883 kb on - strand at 687.995 kb on + strand, within B158DRAFT_0686 at 687.995 kb on + strand, within B158DRAFT_0686 at 687.995 kb on + strand, within B158DRAFT_0686 at 688.019 kb on + strand, within B158DRAFT_0686 at 688.047 kb on + strand, within B158DRAFT_0686 at 688.086 kb on - strand, within B158DRAFT_0686 at 688.099 kb on + strand, within B158DRAFT_0686 at 688.109 kb on + strand, within B158DRAFT_0686 at 688.112 kb on - strand, within B158DRAFT_0686 at 688.124 kb on + strand, within B158DRAFT_0686 at 688.124 kb on + strand, within B158DRAFT_0686 at 688.125 kb on + strand, within B158DRAFT_0686 at 688.125 kb on + strand, within B158DRAFT_0686 at 688.133 kb on - strand, within B158DRAFT_0686 at 688.133 kb on - strand, within B158DRAFT_0686 at 688.133 kb on - strand, within B158DRAFT_0686 at 688.133 kb on - strand, within B158DRAFT_0686 at 688.133 kb on - strand, within B158DRAFT_0686 at 688.180 kb on - strand, within B158DRAFT_0686 at 688.210 kb on - strand, within B158DRAFT_0686 at 688.266 kb on - strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.286 kb on + strand, within B158DRAFT_0686 at 688.294 kb on - strand, within B158DRAFT_0686 at 688.294 kb on - strand, within B158DRAFT_0686 at 688.294 kb on - strand, within B158DRAFT_0686 at 688.307 kb on + strand, within B158DRAFT_0686 at 688.360 kb on + strand, within B158DRAFT_0686 at 688.370 kb on + strand, within B158DRAFT_0686 at 688.375 kb on + strand, within B158DRAFT_0686 at 688.378 kb on - strand, within B158DRAFT_0686 at 688.442 kb on + strand, within B158DRAFT_0686 at 688.454 kb on + strand, within B158DRAFT_0686 at 688.460 kb on - strand, within B158DRAFT_0686 at 688.511 kb on + strand, within B158DRAFT_0686 at 688.530 kb on + strand, within B158DRAFT_0686 at 688.566 kb on + strand, within B158DRAFT_0686 at 688.579 kb on - strand, within B158DRAFT_0686 at 688.591 kb on + strand, within B158DRAFT_0686 at 688.596 kb on - strand, within B158DRAFT_0686 at 688.642 kb on + strand at 688.662 kb on + strand at 688.715 kb on + strand at 688.723 kb on - strand at 688.751 kb on + strand at 688.767 kb on - strand at 688.827 kb on + strand, within B158DRAFT_0687 at 688.827 kb on + strand, within B158DRAFT_0687 at 688.827 kb on - strand, within B158DRAFT_0687 at 688.835 kb on - strand, within B158DRAFT_0687 at 688.940 kb on + strand, within B158DRAFT_0687 at 688.940 kb on + strand, within B158DRAFT_0687 at 688.940 kb on + strand, within B158DRAFT_0687 at 688.945 kb on + strand, within B158DRAFT_0687 at 688.947 kb on - strand, within B158DRAFT_0687 at 688.968 kb on + strand, within B158DRAFT_0687 at 689.010 kb on - strand, within B158DRAFT_0687 at 689.018 kb on - strand, within B158DRAFT_0687 at 689.067 kb on - strand, within B158DRAFT_0687 at 689.105 kb on + strand, within B158DRAFT_0687 at 689.105 kb on + strand, within B158DRAFT_0687 at 689.105 kb on + strand, within B158DRAFT_0687 at 689.105 kb on + strand, within B158DRAFT_0687 at 689.105 kb on + strand, within B158DRAFT_0687 at 689.113 kb on - strand at 689.113 kb on - strand at 689.113 kb on - strand at 689.113 kb on - strand at 689.113 kb on - strand at 689.113 kb on - strand at 689.113 kb on - strand at 689.126 kb on - strand at 689.172 kb on + strand at 689.176 kb on + strand at 689.259 kb on + strand at 689.441 kb on - strand, within B158DRAFT_0688 at 689.501 kb on - strand, within B158DRAFT_0688 at 689.619 kb on + strand, within B158DRAFT_0688 at 689.725 kb on + strand, within B158DRAFT_0688 at 689.725 kb on + strand, within B158DRAFT_0688 at 689.725 kb on - strand, within B158DRAFT_0688 at 689.834 kb on + strand, within B158DRAFT_0688 at 689.834 kb on + strand, within B158DRAFT_0688 at 689.842 kb on - strand, within B158DRAFT_0688 at 689.842 kb on - strand, within B158DRAFT_0688 at 689.842 kb on - strand, within B158DRAFT_0688 at 689.866 kb on + strand, within B158DRAFT_0688 at 689.877 kb on + strand, within B158DRAFT_0688 at 689.877 kb on + strand, within B158DRAFT_0688 at 690.052 kb on - strand, within B158DRAFT_0688 at 690.094 kb on + strand, within B158DRAFT_0688 at 690.114 kb on + strand, within B158DRAFT_0688 at 690.119 kb on + strand, within B158DRAFT_0688 at 690.124 kb on + strand, within B158DRAFT_0688 at 690.124 kb on + strand, within B158DRAFT_0688
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 687,780 - -4.0 687,840 + +0.2 687,883 - -0.6 687,995 + B158DRAFT_0686 0.16 -0.1 687,995 + B158DRAFT_0686 0.16 -0.6 687,995 + B158DRAFT_0686 0.16 -0.3 688,019 + B158DRAFT_0686 0.19 +0.2 688,047 + B158DRAFT_0686 0.22 -0.2 688,086 - B158DRAFT_0686 0.27 -1.4 688,099 + B158DRAFT_0686 0.28 +0.4 688,109 + B158DRAFT_0686 0.29 -0.2 688,112 - B158DRAFT_0686 0.30 +0.2 688,124 + B158DRAFT_0686 0.31 -0.2 688,124 + B158DRAFT_0686 0.31 -0.5 688,125 + B158DRAFT_0686 0.31 +0.6 688,125 + B158DRAFT_0686 0.31 -0.1 688,133 - B158DRAFT_0686 0.32 -1.0 688,133 - B158DRAFT_0686 0.32 +0.0 688,133 - B158DRAFT_0686 0.32 -0.3 688,133 - B158DRAFT_0686 0.32 -0.0 688,133 - B158DRAFT_0686 0.32 -0.3 688,180 - B158DRAFT_0686 0.38 +0.1 688,210 - B158DRAFT_0686 0.41 +0.2 688,266 - B158DRAFT_0686 0.47 -0.6 688,286 + B158DRAFT_0686 0.50 -0.3 688,286 + B158DRAFT_0686 0.50 -0.3 688,286 + B158DRAFT_0686 0.50 -0.1 688,286 + B158DRAFT_0686 0.50 -0.2 688,286 + B158DRAFT_0686 0.50 -0.3 688,286 + B158DRAFT_0686 0.50 +0.1 688,294 - B158DRAFT_0686 0.51 -0.1 688,294 - B158DRAFT_0686 0.51 +0.0 688,294 - B158DRAFT_0686 0.51 +0.4 688,307 + B158DRAFT_0686 0.52 +0.5 688,360 + B158DRAFT_0686 0.58 +0.2 688,370 + B158DRAFT_0686 0.59 -0.0 688,375 + B158DRAFT_0686 0.60 -0.2 688,378 - B158DRAFT_0686 0.60 -0.1 688,442 + B158DRAFT_0686 0.68 +0.1 688,454 + B158DRAFT_0686 0.69 -0.9 688,460 - B158DRAFT_0686 0.70 -0.1 688,511 + B158DRAFT_0686 0.75 +0.1 688,530 + B158DRAFT_0686 0.78 -0.3 688,566 + B158DRAFT_0686 0.82 -0.3 688,579 - B158DRAFT_0686 0.83 +0.2 688,591 + B158DRAFT_0686 0.85 +0.1 688,596 - B158DRAFT_0686 0.85 -0.3 688,642 + -0.6 688,662 + +0.3 688,715 + +0.1 688,723 - -0.6 688,751 + -0.2 688,767 - +0.2 688,827 + B158DRAFT_0687 0.17 +0.1 688,827 + B158DRAFT_0687 0.17 -0.2 688,827 - B158DRAFT_0687 0.17 -1.4 688,835 - B158DRAFT_0687 0.19 -0.2 688,940 + B158DRAFT_0687 0.46 +0.7 688,940 + B158DRAFT_0687 0.46 -0.6 688,940 + B158DRAFT_0687 0.46 -1.4 688,945 + B158DRAFT_0687 0.47 -0.5 688,947 - B158DRAFT_0687 0.48 +0.0 688,968 + B158DRAFT_0687 0.53 -1.0 689,010 - B158DRAFT_0687 0.64 +0.2 689,018 - B158DRAFT_0687 0.66 -0.2 689,067 - B158DRAFT_0687 0.79 -0.1 689,105 + B158DRAFT_0687 0.89 +0.2 689,105 + B158DRAFT_0687 0.89 +0.5 689,105 + B158DRAFT_0687 0.89 -0.2 689,105 + B158DRAFT_0687 0.89 -0.3 689,105 + B158DRAFT_0687 0.89 +0.2 689,113 - +0.1 689,113 - -0.2 689,113 - -0.1 689,113 - +0.5 689,113 - -0.2 689,113 - +0.3 689,113 - -0.3 689,126 - -0.2 689,172 + -0.3 689,176 + -0.1 689,259 + +0.1 689,441 - B158DRAFT_0688 0.16 -2.0 689,501 - B158DRAFT_0688 0.22 -1.0 689,619 + B158DRAFT_0688 0.35 -1.6 689,725 + B158DRAFT_0688 0.46 -1.4 689,725 + B158DRAFT_0688 0.46 -1.0 689,725 - B158DRAFT_0688 0.46 -1.2 689,834 + B158DRAFT_0688 0.57 -0.4 689,834 + B158DRAFT_0688 0.57 +0.6 689,842 - B158DRAFT_0688 0.58 -2.9 689,842 - B158DRAFT_0688 0.58 -1.5 689,842 - B158DRAFT_0688 0.58 -0.6 689,866 + B158DRAFT_0688 0.60 -0.8 689,877 + B158DRAFT_0688 0.62 -0.2 689,877 + B158DRAFT_0688 0.62 -1.6 690,052 - B158DRAFT_0688 0.80 -3.0 690,094 + B158DRAFT_0688 0.84 -0.4 690,114 + B158DRAFT_0688 0.86 -0.6 690,119 + B158DRAFT_0688 0.87 -0.0 690,124 + B158DRAFT_0688 0.88 -1.0 690,124 + B158DRAFT_0688 0.88 -0.9
Or see this region's nucleotide sequence