Experiment: m.b. Nickel (II) chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0610 and B158DRAFT_0611 overlap by 4 nucleotides B158DRAFT_0611 and B158DRAFT_0612 are separated by 295 nucleotides B158DRAFT_0612 and B158DRAFT_0613 overlap by 1 nucleotides B158DRAFT_0613 and B158DRAFT_0614 are separated by 30 nucleotides
B158DRAFT_0610: B158DRAFT_0610 - 5-(carboxyamino)imidazole ribonucleotide synthase, at 616,784 to 617,935
_0610
B158DRAFT_0611: B158DRAFT_0611 - 5-(carboxyamino)imidazole ribonucleotide mutase, at 617,932 to 618,417
_0611
B158DRAFT_0612: B158DRAFT_0612 - putative oligopeptide transporter, OPT family, at 618,713 to 620,707
_0612
B158DRAFT_0613: B158DRAFT_0613 - Lysophospholipase L1 and related esterases, at 620,707 to 621,327
_0613
B158DRAFT_0614: B158DRAFT_0614 - dihydrodipicolinate reductase (EC 1.3.1.26), at 621,358 to 622,161
_0614
Position (kb) 618
619
620
621 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 618.631 kb on - strand at 618.687 kb on + strand at 618.754 kb on - strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.774 kb on + strand at 618.782 kb on - strand at 618.869 kb on + strand at 618.891 kb on + strand at 618.891 kb on + strand at 618.896 kb on + strand at 618.899 kb on - strand at 618.899 kb on - strand at 618.899 kb on - strand at 618.904 kb on - strand at 618.953 kb on + strand, within B158DRAFT_0612 at 619.033 kb on + strand, within B158DRAFT_0612 at 619.033 kb on + strand, within B158DRAFT_0612 at 619.041 kb on - strand, within B158DRAFT_0612 at 619.046 kb on + strand, within B158DRAFT_0612 at 619.054 kb on - strand, within B158DRAFT_0612 at 619.054 kb on - strand, within B158DRAFT_0612 at 619.064 kb on + strand, within B158DRAFT_0612 at 619.072 kb on - strand, within B158DRAFT_0612 at 619.088 kb on + strand, within B158DRAFT_0612 at 619.119 kb on + strand, within B158DRAFT_0612 at 619.141 kb on + strand, within B158DRAFT_0612 at 619.142 kb on - strand, within B158DRAFT_0612 at 619.156 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.192 kb on + strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.200 kb on - strand, within B158DRAFT_0612 at 619.204 kb on + strand, within B158DRAFT_0612 at 619.205 kb on - strand, within B158DRAFT_0612 at 619.223 kb on - strand, within B158DRAFT_0612 at 619.385 kb on - strand, within B158DRAFT_0612 at 619.408 kb on + strand, within B158DRAFT_0612 at 619.416 kb on - strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.438 kb on + strand, within B158DRAFT_0612 at 619.446 kb on - strand, within B158DRAFT_0612 at 619.454 kb on + strand, within B158DRAFT_0612 at 619.498 kb on + strand, within B158DRAFT_0612 at 619.505 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.533 kb on + strand, within B158DRAFT_0612 at 619.541 kb on - strand, within B158DRAFT_0612 at 619.551 kb on - strand, within B158DRAFT_0612 at 619.562 kb on + strand, within B158DRAFT_0612 at 619.593 kb on - strand, within B158DRAFT_0612 at 619.641 kb on - strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.662 kb on + strand, within B158DRAFT_0612 at 619.670 kb on - strand, within B158DRAFT_0612 at 619.684 kb on - strand, within B158DRAFT_0612 at 619.741 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.751 kb on + strand, within B158DRAFT_0612 at 619.756 kb on + strand, within B158DRAFT_0612 at 619.759 kb on - strand, within B158DRAFT_0612 at 619.813 kb on - strand, within B158DRAFT_0612 at 619.831 kb on - strand, within B158DRAFT_0612 at 619.836 kb on - strand, within B158DRAFT_0612 at 619.840 kb on + strand, within B158DRAFT_0612 at 619.913 kb on - strand, within B158DRAFT_0612 at 619.949 kb on - strand, within B158DRAFT_0612 at 619.963 kb on + strand, within B158DRAFT_0612 at 620.000 kb on - strand, within B158DRAFT_0612 at 620.008 kb on + strand, within B158DRAFT_0612 at 620.052 kb on + strand, within B158DRAFT_0612 at 620.063 kb on - strand, within B158DRAFT_0612 at 620.148 kb on + strand, within B158DRAFT_0612 at 620.155 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.165 kb on + strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.173 kb on - strand, within B158DRAFT_0612 at 620.175 kb on + strand, within B158DRAFT_0612 at 620.266 kb on - strand, within B158DRAFT_0612 at 620.291 kb on + strand, within B158DRAFT_0612 at 620.296 kb on + strand, within B158DRAFT_0612 at 620.366 kb on + strand, within B158DRAFT_0612 at 620.404 kb on + strand, within B158DRAFT_0612 at 620.420 kb on - strand, within B158DRAFT_0612 at 620.425 kb on - strand, within B158DRAFT_0612 at 620.512 kb on - strand at 620.534 kb on + strand at 620.534 kb on + strand at 620.542 kb on - strand at 620.542 kb on - strand at 620.583 kb on - strand at 620.613 kb on + strand at 620.760 kb on + strand at 620.763 kb on + strand at 620.786 kb on + strand, within B158DRAFT_0613 at 620.809 kb on - strand, within B158DRAFT_0613 at 620.846 kb on + strand, within B158DRAFT_0613 at 620.854 kb on - strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.979 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.984 kb on + strand, within B158DRAFT_0613 at 620.987 kb on - strand, within B158DRAFT_0613 at 620.992 kb on - strand, within B158DRAFT_0613 at 621.042 kb on + strand, within B158DRAFT_0613 at 621.053 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.095 kb on + strand, within B158DRAFT_0613 at 621.097 kb on + strand, within B158DRAFT_0613 at 621.216 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.259 kb on + strand, within B158DRAFT_0613 at 621.314 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1.25 mM remove 618,631 - -0.1 618,687 + -0.6 618,754 - -2.3 618,774 + -0.0 618,774 + +0.3 618,774 + -0.1 618,774 + -0.7 618,782 - -2.1 618,869 + -0.2 618,891 + -0.1 618,891 + +0.2 618,896 + +0.2 618,899 - -1.8 618,899 - -0.9 618,899 - -1.4 618,904 - -1.5 618,953 + B158DRAFT_0612 0.12 -0.5 619,033 + B158DRAFT_0612 0.16 +0.3 619,033 + B158DRAFT_0612 0.16 +0.1 619,041 - B158DRAFT_0612 0.16 -2.0 619,046 + B158DRAFT_0612 0.17 -0.7 619,054 - B158DRAFT_0612 0.17 -0.9 619,054 - B158DRAFT_0612 0.17 -3.1 619,064 + B158DRAFT_0612 0.18 -0.3 619,072 - B158DRAFT_0612 0.18 -1.4 619,088 + B158DRAFT_0612 0.19 -2.4 619,119 + B158DRAFT_0612 0.20 -1.7 619,141 + B158DRAFT_0612 0.21 -0.5 619,142 - B158DRAFT_0612 0.22 -0.1 619,156 + B158DRAFT_0612 0.22 -0.6 619,192 + B158DRAFT_0612 0.24 -0.2 619,192 + B158DRAFT_0612 0.24 -0.3 619,192 + B158DRAFT_0612 0.24 -0.2 619,192 + B158DRAFT_0612 0.24 -0.6 619,192 + B158DRAFT_0612 0.24 -0.6 619,200 - B158DRAFT_0612 0.24 -3.0 619,200 - B158DRAFT_0612 0.24 -1.6 619,200 - B158DRAFT_0612 0.24 -1.2 619,200 - B158DRAFT_0612 0.24 -1.4 619,204 + B158DRAFT_0612 0.25 -0.2 619,205 - B158DRAFT_0612 0.25 -1.8 619,223 - B158DRAFT_0612 0.26 -2.6 619,385 - B158DRAFT_0612 0.34 -1.7 619,408 + B158DRAFT_0612 0.35 -0.3 619,416 - B158DRAFT_0612 0.35 -1.7 619,438 + B158DRAFT_0612 0.36 -0.3 619,438 + B158DRAFT_0612 0.36 -0.0 619,438 + B158DRAFT_0612 0.36 +0.2 619,446 - B158DRAFT_0612 0.37 -3.1 619,454 + B158DRAFT_0612 0.37 -0.5 619,498 + B158DRAFT_0612 0.39 -0.4 619,505 + B158DRAFT_0612 0.40 -0.3 619,533 + B158DRAFT_0612 0.41 +0.1 619,533 + B158DRAFT_0612 0.41 +0.0 619,533 + B158DRAFT_0612 0.41 -0.4 619,541 - B158DRAFT_0612 0.42 -2.3 619,551 - B158DRAFT_0612 0.42 -1.3 619,562 + B158DRAFT_0612 0.43 -0.2 619,593 - B158DRAFT_0612 0.44 -2.2 619,641 - B158DRAFT_0612 0.47 -0.6 619,662 + B158DRAFT_0612 0.48 -1.5 619,662 + B158DRAFT_0612 0.48 -0.2 619,662 + B158DRAFT_0612 0.48 -0.1 619,662 + B158DRAFT_0612 0.48 -0.1 619,670 - B158DRAFT_0612 0.48 -1.4 619,684 - B158DRAFT_0612 0.49 -2.5 619,741 + B158DRAFT_0612 0.52 -0.0 619,751 + B158DRAFT_0612 0.52 -0.6 619,751 + B158DRAFT_0612 0.52 +0.2 619,751 + B158DRAFT_0612 0.52 -0.6 619,751 + B158DRAFT_0612 0.52 -0.5 619,756 + B158DRAFT_0612 0.52 -0.6 619,759 - B158DRAFT_0612 0.52 -1.8 619,813 - B158DRAFT_0612 0.55 -1.3 619,831 - B158DRAFT_0612 0.56 -1.0 619,836 - B158DRAFT_0612 0.56 -1.0 619,840 + B158DRAFT_0612 0.56 -0.2 619,913 - B158DRAFT_0612 0.60 -1.1 619,949 - B158DRAFT_0612 0.62 -0.2 619,963 + B158DRAFT_0612 0.63 +0.3 620,000 - B158DRAFT_0612 0.65 -1.0 620,008 + B158DRAFT_0612 0.65 -0.6 620,052 + B158DRAFT_0612 0.67 -0.8 620,063 - B158DRAFT_0612 0.68 -2.6 620,148 + B158DRAFT_0612 0.72 +0.2 620,155 + B158DRAFT_0612 0.72 +1.7 620,165 + B158DRAFT_0612 0.73 -0.2 620,165 + B158DRAFT_0612 0.73 +0.8 620,165 + B158DRAFT_0612 0.73 +0.3 620,165 + B158DRAFT_0612 0.73 -0.2 620,165 + B158DRAFT_0612 0.73 -0.1 620,165 + B158DRAFT_0612 0.73 +0.1 620,165 + B158DRAFT_0612 0.73 -0.1 620,173 - B158DRAFT_0612 0.73 -1.9 620,173 - B158DRAFT_0612 0.73 -2.1 620,173 - B158DRAFT_0612 0.73 -2.2 620,175 + B158DRAFT_0612 0.73 +0.0 620,266 - B158DRAFT_0612 0.78 -1.7 620,291 + B158DRAFT_0612 0.79 +0.5 620,296 + B158DRAFT_0612 0.79 +0.1 620,366 + B158DRAFT_0612 0.83 +0.1 620,404 + B158DRAFT_0612 0.85 +0.5 620,420 - B158DRAFT_0612 0.86 -0.0 620,425 - B158DRAFT_0612 0.86 -1.0 620,512 - -1.4 620,534 + -0.1 620,534 + -0.7 620,542 - -2.3 620,542 - -2.5 620,583 - -2.7 620,613 + -0.1 620,760 + +0.3 620,763 + +0.1 620,786 + B158DRAFT_0613 0.13 -0.7 620,809 - B158DRAFT_0613 0.16 -1.8 620,846 + B158DRAFT_0613 0.22 -0.0 620,854 - B158DRAFT_0613 0.24 -1.4 620,979 + B158DRAFT_0613 0.44 +0.0 620,979 + B158DRAFT_0613 0.44 +0.5 620,979 + B158DRAFT_0613 0.44 +0.1 620,979 + B158DRAFT_0613 0.44 -0.1 620,984 + B158DRAFT_0613 0.45 -0.4 620,984 + B158DRAFT_0613 0.45 +0.1 620,987 - B158DRAFT_0613 0.45 -1.3 620,992 - B158DRAFT_0613 0.46 -2.5 621,042 + B158DRAFT_0613 0.54 -0.1 621,053 + B158DRAFT_0613 0.56 -0.2 621,095 + B158DRAFT_0613 0.62 -0.2 621,095 + B158DRAFT_0613 0.62 +0.2 621,095 + B158DRAFT_0613 0.62 -0.4 621,095 + B158DRAFT_0613 0.62 -1.0 621,095 + B158DRAFT_0613 0.62 +0.7 621,095 + B158DRAFT_0613 0.62 +0.6 621,095 + B158DRAFT_0613 0.62 -0.3 621,095 + B158DRAFT_0613 0.62 -0.0 621,097 + B158DRAFT_0613 0.63 -1.0 621,216 + B158DRAFT_0613 0.82 -0.2 621,259 + B158DRAFT_0613 0.89 -0.3 621,259 + B158DRAFT_0613 0.89 +0.2 621,314 + -0.2
Or see this region's nucleotide sequence