Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2159

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2158 and B158DRAFT_2159 are separated by 4 nucleotidesB158DRAFT_2159 and B158DRAFT_2160 are separated by 116 nucleotides B158DRAFT_2158: B158DRAFT_2158 - Predicted SAM-dependent methyltransferase, at 297,085 to 298,161 _2158 B158DRAFT_2159: B158DRAFT_2159 - 7-cyano-7-deazaguanine reductase, at 298,166 to 299,002 _2159 B158DRAFT_2160: B158DRAFT_2160 - sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2), at 299,119 to 300,960 _2160 Position (kb) 298 299 300Strain fitness (log2 ratio) -2 -1 0 1at 297.172 kb on + strandat 297.185 kb on + strandat 297.202 kb on + strand, within B158DRAFT_2158at 297.226 kb on - strand, within B158DRAFT_2158at 297.235 kb on - strand, within B158DRAFT_2158at 297.311 kb on + strand, within B158DRAFT_2158at 297.358 kb on - strand, within B158DRAFT_2158at 297.363 kb on + strand, within B158DRAFT_2158at 297.364 kb on - strand, within B158DRAFT_2158at 297.378 kb on + strand, within B158DRAFT_2158at 297.379 kb on - strand, within B158DRAFT_2158at 297.381 kb on - strand, within B158DRAFT_2158at 297.381 kb on - strand, within B158DRAFT_2158at 297.386 kb on - strand, within B158DRAFT_2158at 297.401 kb on - strand, within B158DRAFT_2158at 297.406 kb on + strand, within B158DRAFT_2158at 297.414 kb on - strand, within B158DRAFT_2158at 297.424 kb on - strand, within B158DRAFT_2158at 297.425 kb on + strand, within B158DRAFT_2158at 297.425 kb on + strand, within B158DRAFT_2158at 297.425 kb on + strand, within B158DRAFT_2158at 297.463 kb on + strand, within B158DRAFT_2158at 297.463 kb on + strand, within B158DRAFT_2158at 297.471 kb on - strand, within B158DRAFT_2158at 297.554 kb on - strand, within B158DRAFT_2158at 297.643 kb on + strand, within B158DRAFT_2158at 297.651 kb on - strand, within B158DRAFT_2158at 297.652 kb on - strand, within B158DRAFT_2158at 297.721 kb on + strand, within B158DRAFT_2158at 297.721 kb on + strand, within B158DRAFT_2158at 297.721 kb on + strand, within B158DRAFT_2158at 297.721 kb on + strand, within B158DRAFT_2158at 297.729 kb on - strand, within B158DRAFT_2158at 297.952 kb on - strand, within B158DRAFT_2158at 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.156 kb on + strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.164 kb on - strandat 298.187 kb on + strandat 298.200 kb on - strandat 298.233 kb on + strandat 298.336 kb on - strand, within B158DRAFT_2159at 298.374 kb on + strand, within B158DRAFT_2159at 298.410 kb on + strand, within B158DRAFT_2159at 298.428 kb on + strand, within B158DRAFT_2159at 298.449 kb on + strand, within B158DRAFT_2159at 298.517 kb on + strand, within B158DRAFT_2159at 298.552 kb on + strand, within B158DRAFT_2159at 298.574 kb on + strand, within B158DRAFT_2159at 298.625 kb on - strand, within B158DRAFT_2159at 298.625 kb on - strand, within B158DRAFT_2159at 298.625 kb on - strand, within B158DRAFT_2159at 298.625 kb on - strand, within B158DRAFT_2159at 298.652 kb on - strand, within B158DRAFT_2159at 298.705 kb on + strand, within B158DRAFT_2159at 298.887 kb on + strand, within B158DRAFT_2159at 298.887 kb on + strand, within B158DRAFT_2159at 298.974 kb on + strandat 298.974 kb on + strandat 298.979 kb on + strandat 298.979 kb on + strandat 298.979 kb on + strandat 298.982 kb on - strandat 298.984 kb on + strandat 298.987 kb on - strandat 299.101 kb on - strandat 299.102 kb on - strandat 299.146 kb on + strandat 299.196 kb on + strandat 299.201 kb on + strandat 299.204 kb on - strandat 299.204 kb on - strandat 299.204 kb on - strandat 299.204 kb on - strandat 299.204 kb on - strandat 299.204 kb on - strandat 299.209 kb on - strandat 299.234 kb on + strandat 299.234 kb on + strandat 299.234 kb on + strandat 299.234 kb on + strandat 299.234 kb on + strandat 299.242 kb on - strandat 299.242 kb on - strandat 299.242 kb on - strandat 299.288 kb on + strandat 299.288 kb on + strandat 299.288 kb on + strandat 299.296 kb on - strandat 299.398 kb on + strand, within B158DRAFT_2160at 299.408 kb on - strand, within B158DRAFT_2160at 299.486 kb on + strand, within B158DRAFT_2160at 299.486 kb on + strand, within B158DRAFT_2160at 299.486 kb on + strand, within B158DRAFT_2160at 299.486 kb on + strand, within B158DRAFT_2160at 299.494 kb on - strand, within B158DRAFT_2160at 299.517 kb on - strand, within B158DRAFT_2160at 299.539 kb on + strand, within B158DRAFT_2160at 299.584 kb on + strand, within B158DRAFT_2160at 299.696 kb on + strand, within B158DRAFT_2160at 299.729 kb on + strand, within B158DRAFT_2160at 299.907 kb on - strand, within B158DRAFT_2160

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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297,172 + +0.2
297,185 + -0.6
297,202 + B158DRAFT_2158 0.11 +0.1
297,226 - B158DRAFT_2158 0.13 -0.6
297,235 - B158DRAFT_2158 0.14 -0.3
297,311 + B158DRAFT_2158 0.21 +0.8
297,358 - B158DRAFT_2158 0.25 -0.2
297,363 + B158DRAFT_2158 0.26 +0.1
297,364 - B158DRAFT_2158 0.26 -0.2
297,378 + B158DRAFT_2158 0.27 -0.2
297,379 - B158DRAFT_2158 0.27 -0.3
297,381 - B158DRAFT_2158 0.27 -0.3
297,381 - B158DRAFT_2158 0.27 +0.4
297,386 - B158DRAFT_2158 0.28 +0.6
297,401 - B158DRAFT_2158 0.29 -0.8
297,406 + B158DRAFT_2158 0.30 +0.4
297,414 - B158DRAFT_2158 0.31 +0.3
297,424 - B158DRAFT_2158 0.31 -0.5
297,425 + B158DRAFT_2158 0.32 -0.4
297,425 + B158DRAFT_2158 0.32 -0.9
297,425 + B158DRAFT_2158 0.32 +0.1
297,463 + B158DRAFT_2158 0.35 +0.1
297,463 + B158DRAFT_2158 0.35 -0.4
297,471 - B158DRAFT_2158 0.36 -1.0
297,554 - B158DRAFT_2158 0.44 -0.5
297,643 + B158DRAFT_2158 0.52 -0.7
297,651 - B158DRAFT_2158 0.53 +0.2
297,652 - B158DRAFT_2158 0.53 -0.7
297,721 + B158DRAFT_2158 0.59 +0.5
297,721 + B158DRAFT_2158 0.59 -0.7
297,721 + B158DRAFT_2158 0.59 -0.1
297,721 + B158DRAFT_2158 0.59 -1.4
297,729 - B158DRAFT_2158 0.60 -0.1
297,952 - B158DRAFT_2158 0.81 -0.1
298,156 + -0.6
298,156 + -2.0
298,156 + -1.2
298,156 + -0.1
298,156 + -0.1
298,156 + +0.9
298,156 + -0.8
298,156 + -0.1
298,156 + -0.8
298,156 + +0.5
298,164 - -2.5
298,164 - -0.6
298,164 - -0.1
298,164 - -1.1
298,164 - -0.2
298,164 - -0.1
298,164 - -0.5
298,164 - -1.0
298,187 + -0.6
298,200 - -0.5
298,233 + -1.0
298,336 - B158DRAFT_2159 0.20 -1.4
298,374 + B158DRAFT_2159 0.25 -0.4
298,410 + B158DRAFT_2159 0.29 -0.6
298,428 + B158DRAFT_2159 0.31 +0.0
298,449 + B158DRAFT_2159 0.34 -0.8
298,517 + B158DRAFT_2159 0.42 -1.2
298,552 + B158DRAFT_2159 0.46 -0.6
298,574 + B158DRAFT_2159 0.49 -1.0
298,625 - B158DRAFT_2159 0.55 -0.9
298,625 - B158DRAFT_2159 0.55 -1.7
298,625 - B158DRAFT_2159 0.55 -0.1
298,625 - B158DRAFT_2159 0.55 -0.9
298,652 - B158DRAFT_2159 0.58 -0.2
298,705 + B158DRAFT_2159 0.64 -0.4
298,887 + B158DRAFT_2159 0.86 -1.1
298,887 + B158DRAFT_2159 0.86 -0.3
298,974 + -0.5
298,974 + +0.4
298,979 + -1.0
298,979 + -1.4
298,979 + +0.2
298,982 - -0.1
298,984 + -0.5
298,987 - -1.0
299,101 - -0.7
299,102 - -0.0
299,146 + +0.3
299,196 + -0.5
299,201 + +0.1
299,204 - +0.5
299,204 - -0.0
299,204 - -0.5
299,204 - -0.6
299,204 - +0.4
299,204 - -0.1
299,209 - +1.1
299,234 + +0.2
299,234 + -0.4
299,234 + -1.1
299,234 + +0.0
299,234 + -0.0
299,242 - +0.5
299,242 - -0.7
299,242 - +0.2
299,288 + +0.1
299,288 + -0.3
299,288 + +0.2
299,296 - +0.1
299,398 + B158DRAFT_2160 0.15 +1.4
299,408 - B158DRAFT_2160 0.16 -0.1
299,486 + B158DRAFT_2160 0.20 +0.4
299,486 + B158DRAFT_2160 0.20 +0.1
299,486 + B158DRAFT_2160 0.20 -0.0
299,486 + B158DRAFT_2160 0.20 -0.1
299,494 - B158DRAFT_2160 0.20 -1.1
299,517 - B158DRAFT_2160 0.22 -0.6
299,539 + B158DRAFT_2160 0.23 -1.0
299,584 + B158DRAFT_2160 0.25 -1.9
299,696 + B158DRAFT_2160 0.31 -0.1
299,729 + B158DRAFT_2160 0.33 +0.1
299,907 - B158DRAFT_2160 0.43 -0.3

Or see this region's nucleotide sequence