Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1609 and B158DRAFT_1610 are separated by 20 nucleotides B158DRAFT_1610 and B158DRAFT_1611 are separated by 29 nucleotides B158DRAFT_1611 and B158DRAFT_1612 are separated by 106 nucleotides B158DRAFT_1612 and B158DRAFT_1613 are separated by 91 nucleotides
B158DRAFT_1609: B158DRAFT_1609 - putative thymidine phosphorylase, at 1,670,376 to 1,671,890
_1609
B158DRAFT_1610: B158DRAFT_1610 - Metal-dependent hydrolase, at 1,671,911 to 1,672,657
_1610
B158DRAFT_1611: B158DRAFT_1611 - hypothetical protein, at 1,672,687 to 1,672,977
_1611
B158DRAFT_1612: B158DRAFT_1612 - hypothetical protein, at 1,673,084 to 1,673,251
_1612
B158DRAFT_1613: B158DRAFT_1613 - arsenical-resistance protein, at 1,673,343 to 1,674,362
_1613
Position (kb)
1672
1673 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1671.695 kb on + strand, within B158DRAFT_1609 at 1671.761 kb on + strand at 1671.994 kb on - strand, within B158DRAFT_1610 at 1672.058 kb on + strand, within B158DRAFT_1610 at 1672.058 kb on - strand, within B158DRAFT_1610 at 1672.101 kb on + strand, within B158DRAFT_1610 at 1672.109 kb on - strand, within B158DRAFT_1610 at 1672.111 kb on - strand, within B158DRAFT_1610 at 1672.124 kb on - strand, within B158DRAFT_1610 at 1672.124 kb on - strand, within B158DRAFT_1610 at 1672.312 kb on - strand, within B158DRAFT_1610 at 1672.331 kb on - strand, within B158DRAFT_1610 at 1672.426 kb on - strand, within B158DRAFT_1610 at 1672.453 kb on + strand, within B158DRAFT_1610 at 1672.498 kb on + strand, within B158DRAFT_1610 at 1672.545 kb on + strand, within B158DRAFT_1610 at 1672.553 kb on - strand, within B158DRAFT_1610 at 1672.558 kb on + strand, within B158DRAFT_1610 at 1672.601 kb on - strand at 1672.620 kb on - strand at 1672.630 kb on + strand at 1672.653 kb on - strand at 1672.666 kb on + strand at 1672.706 kb on - strand at 1672.727 kb on - strand, within B158DRAFT_1611 at 1672.814 kb on + strand, within B158DRAFT_1611 at 1672.814 kb on + strand, within B158DRAFT_1611 at 1672.820 kb on + strand, within B158DRAFT_1611 at 1672.826 kb on + strand, within B158DRAFT_1611 at 1672.827 kb on + strand, within B158DRAFT_1611 at 1672.922 kb on + strand, within B158DRAFT_1611 at 1672.922 kb on + strand, within B158DRAFT_1611 at 1672.922 kb on + strand, within B158DRAFT_1611 at 1672.922 kb on + strand, within B158DRAFT_1611 at 1672.922 kb on + strand, within B158DRAFT_1611 at 1672.930 kb on - strand, within B158DRAFT_1611 at 1672.930 kb on - strand, within B158DRAFT_1611 at 1672.930 kb on - strand, within B158DRAFT_1611 at 1672.930 kb on - strand, within B158DRAFT_1611 at 1672.930 kb on - strand, within B158DRAFT_1611 at 1672.988 kb on + strand at 1672.988 kb on + strand at 1672.988 kb on + strand at 1672.996 kb on - strand at 1673.002 kb on + strand at 1673.002 kb on + strand at 1673.002 kb on + strand at 1673.002 kb on + strand at 1673.002 kb on + strand at 1673.010 kb on + strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.010 kb on - strand at 1673.018 kb on - strand at 1673.018 kb on - strand at 1673.118 kb on + strand, within B158DRAFT_1612 at 1673.187 kb on + strand, within B158DRAFT_1612 at 1673.187 kb on + strand, within B158DRAFT_1612 at 1673.289 kb on + strand at 1673.289 kb on + strand at 1673.294 kb on + strand at 1673.294 kb on + strand at 1673.313 kb on - strand at 1673.348 kb on + strand at 1673.404 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.443 kb on + strand at 1673.451 kb on - strand, within B158DRAFT_1613 at 1673.451 kb on - strand, within B158DRAFT_1613 at 1673.451 kb on - strand, within B158DRAFT_1613 at 1673.451 kb on - strand, within B158DRAFT_1613 at 1673.451 kb on - strand, within B158DRAFT_1613 at 1673.460 kb on - strand, within B158DRAFT_1613 at 1673.570 kb on - strand, within B158DRAFT_1613 at 1673.688 kb on - strand, within B158DRAFT_1613 at 1673.735 kb on - strand, within B158DRAFT_1613 at 1673.745 kb on - strand, within B158DRAFT_1613 at 1673.830 kb on - strand, within B158DRAFT_1613 at 1673.838 kb on + strand, within B158DRAFT_1613 at 1673.897 kb on - strand, within B158DRAFT_1613 at 1673.920 kb on + strand, within B158DRAFT_1613 at 1673.938 kb on - strand, within B158DRAFT_1613 at 1673.940 kb on - strand, within B158DRAFT_1613 at 1673.955 kb on - strand, within B158DRAFT_1613 at 1673.960 kb on - strand, within B158DRAFT_1613
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,671,695 + B158DRAFT_1609 0.87 -1.5 1,671,761 + -0.5 1,671,994 - B158DRAFT_1610 0.11 +0.3 1,672,058 + B158DRAFT_1610 0.20 +0.1 1,672,058 - B158DRAFT_1610 0.20 -0.0 1,672,101 + B158DRAFT_1610 0.25 +0.9 1,672,109 - B158DRAFT_1610 0.27 +0.3 1,672,111 - B158DRAFT_1610 0.27 -1.1 1,672,124 - B158DRAFT_1610 0.29 +0.2 1,672,124 - B158DRAFT_1610 0.29 -1.3 1,672,312 - B158DRAFT_1610 0.54 +0.0 1,672,331 - B158DRAFT_1610 0.56 +0.1 1,672,426 - B158DRAFT_1610 0.69 +0.3 1,672,453 + B158DRAFT_1610 0.73 +0.5 1,672,498 + B158DRAFT_1610 0.79 +0.3 1,672,545 + B158DRAFT_1610 0.85 +0.0 1,672,553 - B158DRAFT_1610 0.86 -1.2 1,672,558 + B158DRAFT_1610 0.87 -0.0 1,672,601 - -0.4 1,672,620 - +0.5 1,672,630 + -2.4 1,672,653 - -0.4 1,672,666 + -0.2 1,672,706 - +0.4 1,672,727 - B158DRAFT_1611 0.14 -0.5 1,672,814 + B158DRAFT_1611 0.44 +0.1 1,672,814 + B158DRAFT_1611 0.44 +0.5 1,672,820 + B158DRAFT_1611 0.46 +1.8 1,672,826 + B158DRAFT_1611 0.48 -0.4 1,672,827 + B158DRAFT_1611 0.48 +0.2 1,672,922 + B158DRAFT_1611 0.81 -0.2 1,672,922 + B158DRAFT_1611 0.81 +0.6 1,672,922 + B158DRAFT_1611 0.81 -0.3 1,672,922 + B158DRAFT_1611 0.81 -0.3 1,672,922 + B158DRAFT_1611 0.81 +0.7 1,672,930 - B158DRAFT_1611 0.84 +0.3 1,672,930 - B158DRAFT_1611 0.84 -1.0 1,672,930 - B158DRAFT_1611 0.84 +0.1 1,672,930 - B158DRAFT_1611 0.84 +0.4 1,672,930 - B158DRAFT_1611 0.84 -0.6 1,672,988 + -0.5 1,672,988 + +0.0 1,672,988 + +0.2 1,672,996 - +0.2 1,673,002 + +0.1 1,673,002 + +0.2 1,673,002 + -1.1 1,673,002 + +1.0 1,673,002 + -0.2 1,673,010 + -1.1 1,673,010 - +0.1 1,673,010 - -0.3 1,673,010 - -0.5 1,673,010 - +0.7 1,673,010 - +0.8 1,673,010 - +0.5 1,673,010 - -0.1 1,673,010 - -0.1 1,673,018 - -0.2 1,673,018 - -0.3 1,673,118 + B158DRAFT_1612 0.20 -0.3 1,673,187 + B158DRAFT_1612 0.61 -0.7 1,673,187 + B158DRAFT_1612 0.61 -0.3 1,673,289 + -0.7 1,673,289 + -0.2 1,673,294 + -0.8 1,673,294 + -0.5 1,673,313 - +0.2 1,673,348 + -0.3 1,673,404 + +0.4 1,673,443 + +0.2 1,673,443 + -0.5 1,673,443 + +0.1 1,673,443 + -0.2 1,673,443 + -0.3 1,673,443 + -0.7 1,673,443 + +0.2 1,673,451 - B158DRAFT_1613 0.11 +0.3 1,673,451 - B158DRAFT_1613 0.11 +0.3 1,673,451 - B158DRAFT_1613 0.11 -0.3 1,673,451 - B158DRAFT_1613 0.11 -0.5 1,673,451 - B158DRAFT_1613 0.11 -0.6 1,673,460 - B158DRAFT_1613 0.11 -0.3 1,673,570 - B158DRAFT_1613 0.22 -0.4 1,673,688 - B158DRAFT_1613 0.34 +0.5 1,673,735 - B158DRAFT_1613 0.38 -0.4 1,673,745 - B158DRAFT_1613 0.39 +0.2 1,673,830 - B158DRAFT_1613 0.48 +0.2 1,673,838 + B158DRAFT_1613 0.49 +0.3 1,673,897 - B158DRAFT_1613 0.54 -0.3 1,673,920 + B158DRAFT_1613 0.57 -0.3 1,673,938 - B158DRAFT_1613 0.58 -0.5 1,673,940 - B158DRAFT_1613 0.59 +0.4 1,673,955 - B158DRAFT_1613 0.60 -0.1 1,673,960 - B158DRAFT_1613 0.60 +0.1
Or see this region's nucleotide sequence