Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1598 and B158DRAFT_1599 are separated by 31 nucleotides B158DRAFT_1599 and B158DRAFT_1600 overlap by 11 nucleotides B158DRAFT_1600 and B158DRAFT_1601 overlap by 11 nucleotides B158DRAFT_1601 and B158DRAFT_1602 are separated by 30 nucleotides
B158DRAFT_1598: B158DRAFT_1598 - lipid A export permease/ATP-binding protein MsbA, at 1,658,006 to 1,659,754
_1598
B158DRAFT_1599: B158DRAFT_1599 - lipid-A-disaccharide kinase (EC 2.7.1.130), at 1,659,786 to 1,660,751
_1599
B158DRAFT_1600: B158DRAFT_1600 - Uncharacterized conserved protein, at 1,660,741 to 1,660,926
_1600
B158DRAFT_1601: B158DRAFT_1601 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 1,660,916 to 1,661,686
_1601
B158DRAFT_1602: B158DRAFT_1602 - Protein-tyrosine-phosphatase, at 1,661,717 to 1,662,202
_1602
Position (kb)
1660
1661 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.777 kb on + strand at 1659.782 kb on + strand at 1660.724 kb on + strand at 1660.724 kb on + strand at 1661.644 kb on + strand at 1661.670 kb on - strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.749 kb on + strand at 1661.749 kb on + strand at 1661.755 kb on + strand at 1661.757 kb on - strand at 1661.780 kb on - strand, within B158DRAFT_1602 at 1661.818 kb on - strand, within B158DRAFT_1602 at 1661.828 kb on - strand, within B158DRAFT_1602 at 1661.850 kb on + strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.877 kb on + strand, within B158DRAFT_1602 at 1661.885 kb on - strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,659,777 + -2.8 1,659,777 + -2.4 1,659,777 + -4.0 1,659,777 + -1.5 1,659,782 + -1.7 1,660,724 + -0.6 1,660,724 + +1.0 1,661,644 + -1.8 1,661,670 - +1.9 1,661,708 + -0.5 1,661,708 + +0.2 1,661,708 + +0.2 1,661,708 + -0.2 1,661,708 + +0.2 1,661,708 + +0.9 1,661,708 + +0.3 1,661,708 + -0.0 1,661,708 + +0.5 1,661,716 - -0.3 1,661,716 - +0.3 1,661,716 - +0.8 1,661,749 + -0.4 1,661,749 + -0.3 1,661,755 + -0.3 1,661,757 - -0.8 1,661,780 - B158DRAFT_1602 0.13 +0.3 1,661,818 - B158DRAFT_1602 0.21 -0.4 1,661,828 - B158DRAFT_1602 0.23 -1.3 1,661,850 + B158DRAFT_1602 0.27 -0.3 1,661,853 - B158DRAFT_1602 0.28 -0.3 1,661,853 - B158DRAFT_1602 0.28 +0.9 1,661,877 + B158DRAFT_1602 0.33 -0.3 1,661,885 - B158DRAFT_1602 0.35 -0.2 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -0.5 1,661,909 + B158DRAFT_1602 0.40 -0.5 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 +0.5 1,661,909 + B158DRAFT_1602 0.40 -0.0 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -1.1 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -0.8 1,661,909 + B158DRAFT_1602 0.40 +0.3 1,661,909 + B158DRAFT_1602 0.40 +0.0 1,661,909 + B158DRAFT_1602 0.40 -0.0 1,661,909 + B158DRAFT_1602 0.40 -1.2 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 +0.0 1,661,909 + B158DRAFT_1602 0.40 -1.1 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 -0.6 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,909 + B158DRAFT_1602 0.40 +1.0 1,661,909 + B158DRAFT_1602 0.40 -0.3 1,661,909 + B158DRAFT_1602 0.40 -0.2 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -3.3 1,661,917 - B158DRAFT_1602 0.41 -0.7 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,917 - B158DRAFT_1602 0.41 -2.9 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.6 1,661,917 - B158DRAFT_1602 0.41 +0.0 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.1 1,661,917 - B158DRAFT_1602 0.41 -0.7 1,661,917 - B158DRAFT_1602 0.41 -0.2 1,661,917 - B158DRAFT_1602 0.41 +0.2 1,661,917 - B158DRAFT_1602 0.41 -0.1
Or see this region's nucleotide sequence