Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1520

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1518 and B158DRAFT_1520 are separated by 364 nucleotidesB158DRAFT_1520 and B158DRAFT_1521 are separated by 197 nucleotidesB158DRAFT_1521 and B158DRAFT_1522 are separated by 29 nucleotides B158DRAFT_1518: B158DRAFT_1518 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 1,570,513 to 1,572,558 _1518 B158DRAFT_1520: B158DRAFT_1520 - hypothetical protein, at 1,572,923 to 1,573,567 _1520 B158DRAFT_1521: B158DRAFT_1521 - Transcriptional regulators, at 1,573,765 to 1,574,256 _1521 B158DRAFT_1522: B158DRAFT_1522 - methionine gamma-lyase, at 1,574,286 to 1,575,488 _1522 Position (kb) 1572 1573 1574Strain fitness (log2 ratio) -3 -2 -1 0 1at 1571.958 kb on + strand, within B158DRAFT_1518at 1571.967 kb on - strand, within B158DRAFT_1518at 1572.033 kb on - strand, within B158DRAFT_1518at 1572.050 kb on - strand, within B158DRAFT_1518at 1572.075 kb on - strand, within B158DRAFT_1518at 1572.094 kb on + strand, within B158DRAFT_1518at 1572.201 kb on - strand, within B158DRAFT_1518at 1572.204 kb on + strand, within B158DRAFT_1518at 1572.210 kb on + strand, within B158DRAFT_1518at 1572.235 kb on + strand, within B158DRAFT_1518at 1572.235 kb on + strand, within B158DRAFT_1518at 1572.243 kb on - strand, within B158DRAFT_1518at 1572.294 kb on + strand, within B158DRAFT_1518at 1572.309 kb on - strand, within B158DRAFT_1518at 1572.394 kb on + strandat 1572.394 kb on + strandat 1572.400 kb on + strandat 1572.400 kb on + strandat 1572.400 kb on + strandat 1572.400 kb on + strandat 1572.411 kb on + strandat 1572.491 kb on - strandat 1572.508 kb on - strandat 1572.536 kb on + strandat 1572.610 kb on + strandat 1572.610 kb on + strandat 1572.618 kb on - strandat 1572.623 kb on - strandat 1572.627 kb on - strandat 1572.895 kb on + strandat 1572.965 kb on + strandat 1572.965 kb on + strandat 1572.995 kb on + strand, within B158DRAFT_1520at 1572.995 kb on + strand, within B158DRAFT_1520at 1573.006 kb on + strand, within B158DRAFT_1520at 1573.014 kb on + strand, within B158DRAFT_1520at 1573.022 kb on - strand, within B158DRAFT_1520at 1573.022 kb on - strand, within B158DRAFT_1520at 1573.023 kb on - strand, within B158DRAFT_1520at 1573.024 kb on - strand, within B158DRAFT_1520at 1573.024 kb on - strand, within B158DRAFT_1520at 1573.069 kb on + strand, within B158DRAFT_1520at 1573.102 kb on + strand, within B158DRAFT_1520at 1573.166 kb on - strand, within B158DRAFT_1520at 1573.189 kb on - strand, within B158DRAFT_1520at 1573.215 kb on + strand, within B158DRAFT_1520at 1573.236 kb on + strand, within B158DRAFT_1520at 1573.244 kb on - strand, within B158DRAFT_1520at 1573.254 kb on - strand, within B158DRAFT_1520at 1573.259 kb on + strand, within B158DRAFT_1520at 1573.267 kb on - strand, within B158DRAFT_1520at 1573.267 kb on - strand, within B158DRAFT_1520at 1573.267 kb on - strand, within B158DRAFT_1520at 1573.267 kb on - strand, within B158DRAFT_1520at 1573.267 kb on - strand, within B158DRAFT_1520at 1573.299 kb on - strand, within B158DRAFT_1520at 1573.315 kb on + strand, within B158DRAFT_1520at 1573.338 kb on + strand, within B158DRAFT_1520at 1573.341 kb on - strand, within B158DRAFT_1520at 1573.346 kb on - strand, within B158DRAFT_1520at 1573.346 kb on - strand, within B158DRAFT_1520at 1573.364 kb on + strand, within B158DRAFT_1520at 1573.374 kb on - strand, within B158DRAFT_1520at 1573.385 kb on + strand, within B158DRAFT_1520at 1573.393 kb on - strand, within B158DRAFT_1520at 1573.393 kb on - strand, within B158DRAFT_1520at 1573.408 kb on - strand, within B158DRAFT_1520at 1573.476 kb on + strand, within B158DRAFT_1520at 1573.484 kb on - strand, within B158DRAFT_1520at 1573.489 kb on - strand, within B158DRAFT_1520at 1573.792 kb on + strandat 1573.800 kb on - strandat 1573.802 kb on + strandat 1573.802 kb on + strandat 1573.807 kb on + strandat 1573.843 kb on + strand, within B158DRAFT_1521at 1573.861 kb on - strand, within B158DRAFT_1521at 1573.892 kb on + strand, within B158DRAFT_1521at 1573.903 kb on + strand, within B158DRAFT_1521at 1573.905 kb on + strand, within B158DRAFT_1521at 1573.911 kb on - strand, within B158DRAFT_1521at 1573.918 kb on + strand, within B158DRAFT_1521at 1573.918 kb on + strand, within B158DRAFT_1521at 1573.920 kb on + strand, within B158DRAFT_1521at 1574.003 kb on + strand, within B158DRAFT_1521at 1574.049 kb on + strand, within B158DRAFT_1521at 1574.055 kb on + strand, within B158DRAFT_1521at 1574.060 kb on + strand, within B158DRAFT_1521at 1574.060 kb on + strand, within B158DRAFT_1521at 1574.060 kb on + strand, within B158DRAFT_1521at 1574.060 kb on + strand, within B158DRAFT_1521at 1574.068 kb on + strand, within B158DRAFT_1521at 1574.068 kb on + strand, within B158DRAFT_1521at 1574.068 kb on + strand, within B158DRAFT_1521at 1574.068 kb on + strand, within B158DRAFT_1521at 1574.068 kb on - strand, within B158DRAFT_1521at 1574.068 kb on - strand, within B158DRAFT_1521at 1574.076 kb on - strand, within B158DRAFT_1521at 1574.076 kb on - strand, within B158DRAFT_1521at 1574.076 kb on - strand, within B158DRAFT_1521at 1574.076 kb on - strand, within B158DRAFT_1521at 1574.078 kb on + strand, within B158DRAFT_1521at 1574.078 kb on + strand, within B158DRAFT_1521at 1574.078 kb on + strand, within B158DRAFT_1521at 1574.078 kb on + strand, within B158DRAFT_1521at 1574.086 kb on - strand, within B158DRAFT_1521at 1574.102 kb on + strand, within B158DRAFT_1521at 1574.140 kb on + strand, within B158DRAFT_1521at 1574.140 kb on + strand, within B158DRAFT_1521at 1574.180 kb on - strand, within B158DRAFT_1521at 1574.180 kb on - strand, within B158DRAFT_1521at 1574.191 kb on + strand, within B158DRAFT_1521at 1574.191 kb on + strand, within B158DRAFT_1521at 1574.191 kb on + strand, within B158DRAFT_1521at 1574.191 kb on + strand, within B158DRAFT_1521at 1574.199 kb on - strand, within B158DRAFT_1521at 1574.199 kb on - strand, within B158DRAFT_1521at 1574.199 kb on - strand, within B158DRAFT_1521at 1574.199 kb on - strand, within B158DRAFT_1521at 1574.217 kb on + strandat 1574.217 kb on + strandat 1574.217 kb on + strandat 1574.225 kb on - strandat 1574.225 kb on - strandat 1574.225 kb on - strandat 1574.225 kb on - strandat 1574.250 kb on + strandat 1574.280 kb on + strandat 1574.353 kb on + strandat 1574.407 kb on + strand, within B158DRAFT_1522at 1574.407 kb on + strand, within B158DRAFT_1522at 1574.415 kb on - strand, within B158DRAFT_1522at 1574.415 kb on - strand, within B158DRAFT_1522at 1574.415 kb on - strand, within B158DRAFT_1522at 1574.415 kb on - strand, within B158DRAFT_1522at 1574.415 kb on - strand, within B158DRAFT_1522at 1574.463 kb on + strand, within B158DRAFT_1522at 1574.463 kb on + strand, within B158DRAFT_1522at 1574.463 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.473 kb on + strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.481 kb on - strand, within B158DRAFT_1522at 1574.488 kb on + strand, within B158DRAFT_1522at 1574.496 kb on - strand, within B158DRAFT_1522at 1574.526 kb on - strand, within B158DRAFT_1522at 1574.542 kb on + strand, within B158DRAFT_1522

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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1,571,958 + B158DRAFT_1518 0.71 -0.2
1,571,967 - B158DRAFT_1518 0.71 -0.3
1,572,033 - B158DRAFT_1518 0.74 +0.0
1,572,050 - B158DRAFT_1518 0.75 -0.1
1,572,075 - B158DRAFT_1518 0.76 -0.1
1,572,094 + B158DRAFT_1518 0.77 -0.5
1,572,201 - B158DRAFT_1518 0.83 -1.0
1,572,204 + B158DRAFT_1518 0.83 -0.4
1,572,210 + B158DRAFT_1518 0.83 -0.5
1,572,235 + B158DRAFT_1518 0.84 +0.3
1,572,235 + B158DRAFT_1518 0.84 -0.2
1,572,243 - B158DRAFT_1518 0.85 -0.5
1,572,294 + B158DRAFT_1518 0.87 -0.3
1,572,309 - B158DRAFT_1518 0.88 +0.4
1,572,394 + +0.2
1,572,394 + -1.5
1,572,400 + -1.1
1,572,400 + -0.2
1,572,400 + -0.7
1,572,400 + -0.4
1,572,411 + -0.9
1,572,491 - -0.4
1,572,508 - +0.4
1,572,536 + -0.2
1,572,610 + -1.2
1,572,610 + -0.4
1,572,618 - +0.3
1,572,623 - -0.3
1,572,627 - -0.2
1,572,895 + +0.2
1,572,965 + +0.4
1,572,965 + -0.6
1,572,995 + B158DRAFT_1520 0.11 +0.2
1,572,995 + B158DRAFT_1520 0.11 +0.5
1,573,006 + B158DRAFT_1520 0.13 -0.0
1,573,014 + B158DRAFT_1520 0.14 -0.0
1,573,022 - B158DRAFT_1520 0.15 -1.5
1,573,022 - B158DRAFT_1520 0.15 -0.5
1,573,023 - B158DRAFT_1520 0.16 +0.1
1,573,024 - B158DRAFT_1520 0.16 +0.5
1,573,024 - B158DRAFT_1520 0.16 +0.4
1,573,069 + B158DRAFT_1520 0.23 -0.3
1,573,102 + B158DRAFT_1520 0.28 -0.6
1,573,166 - B158DRAFT_1520 0.38 -0.1
1,573,189 - B158DRAFT_1520 0.41 +0.2
1,573,215 + B158DRAFT_1520 0.45 +0.0
1,573,236 + B158DRAFT_1520 0.49 +0.3
1,573,244 - B158DRAFT_1520 0.50 +0.1
1,573,254 - B158DRAFT_1520 0.51 +0.2
1,573,259 + B158DRAFT_1520 0.52 +0.3
1,573,267 - B158DRAFT_1520 0.53 -0.2
1,573,267 - B158DRAFT_1520 0.53 +0.7
1,573,267 - B158DRAFT_1520 0.53 +1.0
1,573,267 - B158DRAFT_1520 0.53 -0.2
1,573,267 - B158DRAFT_1520 0.53 -1.0
1,573,299 - B158DRAFT_1520 0.58 +0.4
1,573,315 + B158DRAFT_1520 0.61 +0.3
1,573,338 + B158DRAFT_1520 0.64 -0.3
1,573,341 - B158DRAFT_1520 0.65 -0.1
1,573,346 - B158DRAFT_1520 0.66 -0.5
1,573,346 - B158DRAFT_1520 0.66 +0.8
1,573,364 + B158DRAFT_1520 0.68 +1.0
1,573,374 - B158DRAFT_1520 0.70 -0.3
1,573,385 + B158DRAFT_1520 0.72 -3.3
1,573,393 - B158DRAFT_1520 0.73 +0.0
1,573,393 - B158DRAFT_1520 0.73 +0.5
1,573,408 - B158DRAFT_1520 0.75 +0.7
1,573,476 + B158DRAFT_1520 0.86 +0.0
1,573,484 - B158DRAFT_1520 0.87 +0.5
1,573,489 - B158DRAFT_1520 0.88 +0.0
1,573,792 + -0.5
1,573,800 - -0.1
1,573,802 + -0.3
1,573,802 + -1.3
1,573,807 + -0.5
1,573,843 + B158DRAFT_1521 0.16 -0.3
1,573,861 - B158DRAFT_1521 0.20 -1.0
1,573,892 + B158DRAFT_1521 0.26 -0.5
1,573,903 + B158DRAFT_1521 0.28 -0.1
1,573,905 + B158DRAFT_1521 0.28 -0.0
1,573,911 - B158DRAFT_1521 0.30 -0.2
1,573,918 + B158DRAFT_1521 0.31 -0.1
1,573,918 + B158DRAFT_1521 0.31 -0.9
1,573,920 + B158DRAFT_1521 0.32 +0.8
1,574,003 + B158DRAFT_1521 0.48 -0.0
1,574,049 + B158DRAFT_1521 0.58 +0.0
1,574,055 + B158DRAFT_1521 0.59 -0.1
1,574,060 + B158DRAFT_1521 0.60 -1.0
1,574,060 + B158DRAFT_1521 0.60 +0.2
1,574,060 + B158DRAFT_1521 0.60 -0.5
1,574,060 + B158DRAFT_1521 0.60 -0.1
1,574,068 + B158DRAFT_1521 0.62 -0.9
1,574,068 + B158DRAFT_1521 0.62 +0.1
1,574,068 + B158DRAFT_1521 0.62 +0.2
1,574,068 + B158DRAFT_1521 0.62 -0.5
1,574,068 - B158DRAFT_1521 0.62 -0.4
1,574,068 - B158DRAFT_1521 0.62 -0.4
1,574,076 - B158DRAFT_1521 0.63 -0.4
1,574,076 - B158DRAFT_1521 0.63 -0.1
1,574,076 - B158DRAFT_1521 0.63 +0.0
1,574,076 - B158DRAFT_1521 0.63 -1.2
1,574,078 + B158DRAFT_1521 0.64 +0.2
1,574,078 + B158DRAFT_1521 0.64 -0.5
1,574,078 + B158DRAFT_1521 0.64 -0.1
1,574,078 + B158DRAFT_1521 0.64 -0.1
1,574,086 - B158DRAFT_1521 0.65 -0.2
1,574,102 + B158DRAFT_1521 0.68 -0.1
1,574,140 + B158DRAFT_1521 0.76 -0.2
1,574,140 + B158DRAFT_1521 0.76 -0.5
1,574,180 - B158DRAFT_1521 0.84 -0.1
1,574,180 - B158DRAFT_1521 0.84 +0.7
1,574,191 + B158DRAFT_1521 0.87 +0.6
1,574,191 + B158DRAFT_1521 0.87 -0.1
1,574,191 + B158DRAFT_1521 0.87 -0.4
1,574,191 + B158DRAFT_1521 0.87 -0.3
1,574,199 - B158DRAFT_1521 0.88 +0.2
1,574,199 - B158DRAFT_1521 0.88 -0.3
1,574,199 - B158DRAFT_1521 0.88 +0.1
1,574,199 - B158DRAFT_1521 0.88 -0.0
1,574,217 + +0.0
1,574,217 + -0.6
1,574,217 + -0.3
1,574,225 - -0.7
1,574,225 - +0.0
1,574,225 - -0.4
1,574,225 - -0.5
1,574,250 + -3.2
1,574,280 + +0.3
1,574,353 + +0.9
1,574,407 + B158DRAFT_1522 0.10 -0.2
1,574,407 + B158DRAFT_1522 0.10 +0.0
1,574,415 - B158DRAFT_1522 0.11 -0.0
1,574,415 - B158DRAFT_1522 0.11 -0.4
1,574,415 - B158DRAFT_1522 0.11 +0.6
1,574,415 - B158DRAFT_1522 0.11 +0.2
1,574,415 - B158DRAFT_1522 0.11 -0.6
1,574,463 + B158DRAFT_1522 0.15 +0.1
1,574,463 + B158DRAFT_1522 0.15 +0.1
1,574,463 + B158DRAFT_1522 0.15 -0.6
1,574,473 + B158DRAFT_1522 0.16 +0.6
1,574,473 + B158DRAFT_1522 0.16 +1.1
1,574,473 + B158DRAFT_1522 0.16 -0.3
1,574,473 + B158DRAFT_1522 0.16 -0.7
1,574,473 + B158DRAFT_1522 0.16 -0.0
1,574,473 + B158DRAFT_1522 0.16 -1.5
1,574,473 + B158DRAFT_1522 0.16 -0.1
1,574,473 + B158DRAFT_1522 0.16 -0.2
1,574,473 + B158DRAFT_1522 0.16 -0.1
1,574,473 + B158DRAFT_1522 0.16 +0.5
1,574,473 + B158DRAFT_1522 0.16 -0.4
1,574,481 - B158DRAFT_1522 0.16 +0.3
1,574,481 - B158DRAFT_1522 0.16 -0.5
1,574,481 - B158DRAFT_1522 0.16 -0.2
1,574,481 - B158DRAFT_1522 0.16 -0.7
1,574,481 - B158DRAFT_1522 0.16 -0.4
1,574,481 - B158DRAFT_1522 0.16 -0.4
1,574,481 - B158DRAFT_1522 0.16 -0.6
1,574,481 - B158DRAFT_1522 0.16 -0.0
1,574,481 - B158DRAFT_1522 0.16 +0.5
1,574,481 - B158DRAFT_1522 0.16 -0.5
1,574,481 - B158DRAFT_1522 0.16 +0.3
1,574,481 - B158DRAFT_1522 0.16 +0.3
1,574,481 - B158DRAFT_1522 0.16 -1.5
1,574,481 - B158DRAFT_1522 0.16 +0.5
1,574,488 + B158DRAFT_1522 0.17 +0.1
1,574,496 - B158DRAFT_1522 0.17 +0.0
1,574,526 - B158DRAFT_1522 0.20 -0.5
1,574,542 + B158DRAFT_1522 0.21 +0.2

Or see this region's nucleotide sequence