Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1099 and B158DRAFT_1100 are separated by 36 nucleotides B158DRAFT_1100 and B158DRAFT_1101 are separated by 167 nucleotides
B158DRAFT_1099: B158DRAFT_1099 - Putative NADP-dependent oxidoreductases, at 1,137,907 to 1,138,938
_1099
B158DRAFT_1100: B158DRAFT_1100 - Uncharacterized protein conserved in bacteria, at 1,138,975 to 1,139,362
_1100
B158DRAFT_1101: B158DRAFT_1101 - Imidazolonepropionase and related amidohydrolases, at 1,139,530 to 1,140,960
_1101
Position (kb)
1138
1139
1140 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1138.083 kb on + strand, within B158DRAFT_1099 at 1138.083 kb on + strand, within B158DRAFT_1099 at 1138.091 kb on - strand, within B158DRAFT_1099 at 1138.091 kb on - strand, within B158DRAFT_1099 at 1138.091 kb on - strand, within B158DRAFT_1099 at 1138.103 kb on + strand, within B158DRAFT_1099 at 1138.103 kb on + strand, within B158DRAFT_1099 at 1138.103 kb on + strand, within B158DRAFT_1099 at 1138.103 kb on + strand, within B158DRAFT_1099 at 1138.111 kb on - strand, within B158DRAFT_1099 at 1138.111 kb on - strand, within B158DRAFT_1099 at 1138.111 kb on - strand, within B158DRAFT_1099 at 1138.111 kb on - strand, within B158DRAFT_1099 at 1138.124 kb on + strand, within B158DRAFT_1099 at 1138.132 kb on - strand, within B158DRAFT_1099 at 1138.142 kb on - strand, within B158DRAFT_1099 at 1138.215 kb on - strand, within B158DRAFT_1099 at 1138.273 kb on + strand, within B158DRAFT_1099 at 1138.273 kb on + strand, within B158DRAFT_1099 at 1138.274 kb on - strand, within B158DRAFT_1099 at 1138.281 kb on - strand, within B158DRAFT_1099 at 1138.281 kb on - strand, within B158DRAFT_1099 at 1138.308 kb on + strand, within B158DRAFT_1099 at 1138.310 kb on + strand, within B158DRAFT_1099 at 1138.318 kb on - strand, within B158DRAFT_1099 at 1138.343 kb on - strand, within B158DRAFT_1099 at 1138.344 kb on + strand, within B158DRAFT_1099 at 1138.344 kb on + strand, within B158DRAFT_1099 at 1138.352 kb on - strand, within B158DRAFT_1099 at 1138.385 kb on + strand, within B158DRAFT_1099 at 1138.393 kb on - strand, within B158DRAFT_1099 at 1138.410 kb on + strand, within B158DRAFT_1099 at 1138.418 kb on + strand, within B158DRAFT_1099 at 1138.418 kb on - strand, within B158DRAFT_1099 at 1138.427 kb on - strand, within B158DRAFT_1099 at 1138.501 kb on - strand, within B158DRAFT_1099 at 1138.544 kb on - strand, within B158DRAFT_1099 at 1138.544 kb on - strand, within B158DRAFT_1099 at 1138.549 kb on - strand, within B158DRAFT_1099 at 1138.635 kb on + strand, within B158DRAFT_1099 at 1138.653 kb on + strand, within B158DRAFT_1099 at 1138.661 kb on - strand, within B158DRAFT_1099 at 1138.661 kb on - strand, within B158DRAFT_1099 at 1138.740 kb on - strand, within B158DRAFT_1099 at 1138.767 kb on + strand, within B158DRAFT_1099 at 1138.802 kb on + strand, within B158DRAFT_1099 at 1138.846 kb on + strand at 1138.846 kb on + strand at 1138.846 kb on + strand at 1138.851 kb on + strand at 1138.851 kb on + strand at 1138.851 kb on + strand at 1138.851 kb on + strand at 1138.859 kb on - strand at 1138.859 kb on - strand at 1138.934 kb on + strand at 1138.934 kb on + strand at 1138.934 kb on + strand at 1138.942 kb on - strand at 1138.942 kb on - strand at 1138.942 kb on - strand at 1139.068 kb on + strand, within B158DRAFT_1100 at 1139.197 kb on + strand, within B158DRAFT_1100 at 1139.267 kb on + strand, within B158DRAFT_1100 at 1139.300 kb on + strand, within B158DRAFT_1100 at 1139.371 kb on - strand at 1139.391 kb on - strand at 1139.555 kb on + strand at 1139.795 kb on + strand, within B158DRAFT_1101 at 1139.933 kb on + strand, within B158DRAFT_1101 at 1139.933 kb on + strand, within B158DRAFT_1101 at 1139.941 kb on - strand, within B158DRAFT_1101 at 1139.959 kb on - strand, within B158DRAFT_1101 at 1140.083 kb on - strand, within B158DRAFT_1101 at 1140.123 kb on + strand, within B158DRAFT_1101 at 1140.192 kb on + strand, within B158DRAFT_1101 at 1140.230 kb on - strand, within B158DRAFT_1101 at 1140.236 kb on - strand, within B158DRAFT_1101 at 1140.269 kb on + strand, within B158DRAFT_1101 at 1140.345 kb on + strand, within B158DRAFT_1101 at 1140.362 kb on + strand, within B158DRAFT_1101
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,138,083 + B158DRAFT_1099 0.17 -0.7 1,138,083 + B158DRAFT_1099 0.17 -1.2 1,138,091 - B158DRAFT_1099 0.18 -0.1 1,138,091 - B158DRAFT_1099 0.18 -1.0 1,138,091 - B158DRAFT_1099 0.18 -0.1 1,138,103 + B158DRAFT_1099 0.19 +0.5 1,138,103 + B158DRAFT_1099 0.19 -0.5 1,138,103 + B158DRAFT_1099 0.19 -3.4 1,138,103 + B158DRAFT_1099 0.19 -0.6 1,138,111 - B158DRAFT_1099 0.20 +2.1 1,138,111 - B158DRAFT_1099 0.20 -0.0 1,138,111 - B158DRAFT_1099 0.20 -0.1 1,138,111 - B158DRAFT_1099 0.20 +0.1 1,138,124 + B158DRAFT_1099 0.21 -0.5 1,138,132 - B158DRAFT_1099 0.22 -1.3 1,138,142 - B158DRAFT_1099 0.23 -0.1 1,138,215 - B158DRAFT_1099 0.30 -0.3 1,138,273 + B158DRAFT_1099 0.35 -0.3 1,138,273 + B158DRAFT_1099 0.35 -0.4 1,138,274 - B158DRAFT_1099 0.36 -0.7 1,138,281 - B158DRAFT_1099 0.36 -0.4 1,138,281 - B158DRAFT_1099 0.36 -0.3 1,138,308 + B158DRAFT_1099 0.39 -0.4 1,138,310 + B158DRAFT_1099 0.39 -0.8 1,138,318 - B158DRAFT_1099 0.40 -1.2 1,138,343 - B158DRAFT_1099 0.42 -0.3 1,138,344 + B158DRAFT_1099 0.42 +0.1 1,138,344 + B158DRAFT_1099 0.42 -0.5 1,138,352 - B158DRAFT_1099 0.43 -0.8 1,138,385 + B158DRAFT_1099 0.46 +0.0 1,138,393 - B158DRAFT_1099 0.47 +0.0 1,138,410 + B158DRAFT_1099 0.49 +0.4 1,138,418 + B158DRAFT_1099 0.50 -0.1 1,138,418 - B158DRAFT_1099 0.50 -0.4 1,138,427 - B158DRAFT_1099 0.50 -1.7 1,138,501 - B158DRAFT_1099 0.58 +0.1 1,138,544 - B158DRAFT_1099 0.62 -2.0 1,138,544 - B158DRAFT_1099 0.62 -0.1 1,138,549 - B158DRAFT_1099 0.62 -0.4 1,138,635 + B158DRAFT_1099 0.71 -0.2 1,138,653 + B158DRAFT_1099 0.72 +0.2 1,138,661 - B158DRAFT_1099 0.73 -0.2 1,138,661 - B158DRAFT_1099 0.73 -1.2 1,138,740 - B158DRAFT_1099 0.81 -0.3 1,138,767 + B158DRAFT_1099 0.83 -1.2 1,138,802 + B158DRAFT_1099 0.87 -0.3 1,138,846 + -0.3 1,138,846 + -0.3 1,138,846 + -1.1 1,138,851 + -0.3 1,138,851 + -1.5 1,138,851 + -0.2 1,138,851 + -0.7 1,138,859 - -0.5 1,138,859 - +0.2 1,138,934 + +0.1 1,138,934 + -0.1 1,138,934 + +0.0 1,138,942 - +0.2 1,138,942 - +0.2 1,138,942 - -0.8 1,139,068 + B158DRAFT_1100 0.24 +0.0 1,139,197 + B158DRAFT_1100 0.57 +0.3 1,139,267 + B158DRAFT_1100 0.75 +0.4 1,139,300 + B158DRAFT_1100 0.84 -0.1 1,139,371 - +0.6 1,139,391 - -0.1 1,139,555 + +0.2 1,139,795 + B158DRAFT_1101 0.19 -0.2 1,139,933 + B158DRAFT_1101 0.28 -0.7 1,139,933 + B158DRAFT_1101 0.28 -0.0 1,139,941 - B158DRAFT_1101 0.29 -0.4 1,139,959 - B158DRAFT_1101 0.30 +0.3 1,140,083 - B158DRAFT_1101 0.39 -0.7 1,140,123 + B158DRAFT_1101 0.41 -0.2 1,140,192 + B158DRAFT_1101 0.46 +0.1 1,140,230 - B158DRAFT_1101 0.49 -0.1 1,140,236 - B158DRAFT_1101 0.49 -0.3 1,140,269 + B158DRAFT_1101 0.52 -0.3 1,140,345 + B158DRAFT_1101 0.57 -0.6 1,140,362 + B158DRAFT_1101 0.58 -0.1
Or see this region's nucleotide sequence