Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1069 and B158DRAFT_1070 are separated by 12 nucleotides B158DRAFT_1070 and B158DRAFT_1071 are separated by 11 nucleotides B158DRAFT_1071 and B158DRAFT_1072 are separated by 35 nucleotides
B158DRAFT_1069: B158DRAFT_1069 - succinyldiaminopimelate desuccinylase (EC 3.5.1.18), at 1,108,494 to 1,109,639
_1069
B158DRAFT_1070: B158DRAFT_1070 - transcriptional regulator, Spx/MgsR family, at 1,109,652 to 1,110,017
_1070
B158DRAFT_1071: B158DRAFT_1071 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,110,029 to 1,110,853
_1071
B158DRAFT_1072: B158DRAFT_1072 - UTP--GlnB (protein PII) uridylyltransferase, GlnD, at 1,110,889 to 1,113,537
_1072
Position (kb) 1110
1111 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 1109.732 kb on - strand, within B158DRAFT_1070 at 1109.755 kb on - strand, within B158DRAFT_1070 at 1109.760 kb on - strand, within B158DRAFT_1070 at 1109.828 kb on - strand, within B158DRAFT_1070 at 1109.828 kb on - strand, within B158DRAFT_1070 at 1109.867 kb on - strand, within B158DRAFT_1070 at 1109.972 kb on + strand, within B158DRAFT_1070 at 1109.972 kb on + strand, within B158DRAFT_1070 at 1109.982 kb on - strand at 1110.005 kb on - strand at 1110.888 kb on - strand at 1111.795 kb on - strand, within B158DRAFT_1072
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 1,109,732 - B158DRAFT_1070 0.22 +0.1 1,109,755 - B158DRAFT_1070 0.28 -0.2 1,109,760 - B158DRAFT_1070 0.30 -0.2 1,109,828 - B158DRAFT_1070 0.48 -0.2 1,109,828 - B158DRAFT_1070 0.48 -0.8 1,109,867 - B158DRAFT_1070 0.59 +0.1 1,109,972 + B158DRAFT_1070 0.87 -5.4 1,109,972 + B158DRAFT_1070 0.87 -3.0 1,109,982 - -0.7 1,110,005 - +0.0 1,110,888 - -2.5 1,111,795 - B158DRAFT_1072 0.34 -3.4
Or see this region's nucleotide sequence