Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0907

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0905 and B158DRAFT_0906 are separated by 181 nucleotidesB158DRAFT_0906 and B158DRAFT_0907 are separated by 48 nucleotidesB158DRAFT_0907 and B158DRAFT_0908 are separated by 73 nucleotides B158DRAFT_0905: B158DRAFT_0905 - large conductance mechanosensitive channel protein, at 929,222 to 929,629 _0905 B158DRAFT_0906: B158DRAFT_0906 - Predicted membrane protein, at 929,811 to 930,278 _0906 B158DRAFT_0907: B158DRAFT_0907 - Predicted integral membrane protein, at 930,327 to 931,634 _0907 B158DRAFT_0908: B158DRAFT_0908 - Uncharacterized protein conserved in bacteria containing a pentein-type domain, at 931,708 to 932,748 _0908 Position (kb) 930 931 932Strain fitness (log2 ratio) -2 -1 0 1at 929.345 kb on - strand, within B158DRAFT_0905at 929.408 kb on + strand, within B158DRAFT_0905at 929.408 kb on + strand, within B158DRAFT_0905at 929.828 kb on - strandat 929.835 kb on + strandat 929.843 kb on - strandat 929.843 kb on - strandat 929.903 kb on + strand, within B158DRAFT_0906at 929.908 kb on + strand, within B158DRAFT_0906at 929.908 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.913 kb on + strand, within B158DRAFT_0906at 929.967 kb on + strand, within B158DRAFT_0906at 929.967 kb on + strand, within B158DRAFT_0906at 930.060 kb on + strand, within B158DRAFT_0906at 930.068 kb on - strand, within B158DRAFT_0906at 930.079 kb on + strand, within B158DRAFT_0906at 930.079 kb on + strand, within B158DRAFT_0906at 930.087 kb on - strand, within B158DRAFT_0906at 930.101 kb on + strand, within B158DRAFT_0906at 930.109 kb on - strand, within B158DRAFT_0906at 930.123 kb on + strand, within B158DRAFT_0906at 930.134 kb on + strand, within B158DRAFT_0906at 930.493 kb on - strand, within B158DRAFT_0907at 930.533 kb on + strand, within B158DRAFT_0907at 930.659 kb on - strand, within B158DRAFT_0907at 930.756 kb on + strand, within B158DRAFT_0907at 930.758 kb on + strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.786 kb on - strand, within B158DRAFT_0907at 930.793 kb on + strand, within B158DRAFT_0907at 930.801 kb on - strand, within B158DRAFT_0907at 930.820 kb on + strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.847 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.965 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 931.093 kb on + strand, within B158DRAFT_0907at 931.159 kb on - strand, within B158DRAFT_0907at 931.217 kb on + strand, within B158DRAFT_0907at 931.230 kb on - strand, within B158DRAFT_0907at 931.250 kb on + strand, within B158DRAFT_0907at 931.307 kb on - strand, within B158DRAFT_0907at 931.441 kb on - strand, within B158DRAFT_0907at 931.501 kb on + strand, within B158DRAFT_0907at 931.605 kb on + strandat 931.622 kb on + strandat 931.790 kb on + strandat 931.840 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.968 kb on + strand, within B158DRAFT_0908at 931.976 kb on + strand, within B158DRAFT_0908at 931.976 kb on - strand, within B158DRAFT_0908at 932.071 kb on + strand, within B158DRAFT_0908at 932.116 kb on + strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.236 kb on - strand, within B158DRAFT_0908at 932.310 kb on + strand, within B158DRAFT_0908at 932.351 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.398 kb on + strand, within B158DRAFT_0908at 932.430 kb on + strand, within B158DRAFT_0908at 932.445 kb on - strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.533 kb on + strand, within B158DRAFT_0908at 932.621 kb on - strand, within B158DRAFT_0908

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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929,345 - B158DRAFT_0905 0.30 -0.3
929,408 + B158DRAFT_0905 0.46 -0.1
929,408 + B158DRAFT_0905 0.46 -0.5
929,828 - -0.4
929,835 + +0.4
929,843 - +0.3
929,843 - -0.5
929,903 + B158DRAFT_0906 0.20 -0.5
929,908 + B158DRAFT_0906 0.21 +0.2
929,908 + B158DRAFT_0906 0.21 +0.4
929,913 + B158DRAFT_0906 0.22 -0.8
929,913 + B158DRAFT_0906 0.22 -1.1
929,913 + B158DRAFT_0906 0.22 +0.2
929,913 + B158DRAFT_0906 0.22 -0.1
929,913 + B158DRAFT_0906 0.22 +0.6
929,913 + B158DRAFT_0906 0.22 -0.4
929,967 + B158DRAFT_0906 0.33 -1.2
929,967 + B158DRAFT_0906 0.33 -0.5
930,060 + B158DRAFT_0906 0.53 -0.2
930,068 - B158DRAFT_0906 0.55 -0.2
930,079 + B158DRAFT_0906 0.57 -0.4
930,079 + B158DRAFT_0906 0.57 -0.2
930,087 - B158DRAFT_0906 0.59 +0.2
930,101 + B158DRAFT_0906 0.62 +0.1
930,109 - B158DRAFT_0906 0.64 -0.5
930,123 + B158DRAFT_0906 0.67 +0.2
930,134 + B158DRAFT_0906 0.69 +0.1
930,493 - B158DRAFT_0907 0.13 -1.2
930,533 + B158DRAFT_0907 0.16 +0.4
930,659 - B158DRAFT_0907 0.25 +0.2
930,756 + B158DRAFT_0907 0.33 +0.9
930,758 + B158DRAFT_0907 0.33 +0.3
930,766 - B158DRAFT_0907 0.34 +0.1
930,766 - B158DRAFT_0907 0.34 +0.4
930,781 - B158DRAFT_0907 0.35 -0.5
930,781 - B158DRAFT_0907 0.35 -0.2
930,786 - B158DRAFT_0907 0.35 +0.5
930,793 + B158DRAFT_0907 0.36 +0.7
930,801 - B158DRAFT_0907 0.36 +1.2
930,820 + B158DRAFT_0907 0.38 +0.4
930,833 - B158DRAFT_0907 0.39 -0.0
930,833 - B158DRAFT_0907 0.39 +0.2
930,833 - B158DRAFT_0907 0.39 +0.2
930,833 - B158DRAFT_0907 0.39 -0.6
930,847 + B158DRAFT_0907 0.40 -0.2
930,859 + B158DRAFT_0907 0.41 +0.0
930,859 + B158DRAFT_0907 0.41 +0.1
930,859 + B158DRAFT_0907 0.41 +0.0
930,859 + B158DRAFT_0907 0.41 -0.1
930,867 - B158DRAFT_0907 0.41 -0.5
930,867 - B158DRAFT_0907 0.41 -0.2
930,869 + B158DRAFT_0907 0.41 -0.0
930,869 + B158DRAFT_0907 0.41 -0.2
930,869 + B158DRAFT_0907 0.41 +0.1
930,869 + B158DRAFT_0907 0.41 +0.2
930,877 - B158DRAFT_0907 0.42 -0.2
930,877 - B158DRAFT_0907 0.42 -0.1
930,877 - B158DRAFT_0907 0.42 +0.4
930,965 + B158DRAFT_0907 0.49 +0.5
930,985 + B158DRAFT_0907 0.50 +0.1
930,985 + B158DRAFT_0907 0.50 +0.5
930,985 + B158DRAFT_0907 0.50 +0.1
931,093 + B158DRAFT_0907 0.59 +0.8
931,159 - B158DRAFT_0907 0.64 +0.3
931,217 + B158DRAFT_0907 0.68 +0.4
931,230 - B158DRAFT_0907 0.69 +0.4
931,250 + B158DRAFT_0907 0.71 +0.1
931,307 - B158DRAFT_0907 0.75 +0.3
931,441 - B158DRAFT_0907 0.85 +0.3
931,501 + B158DRAFT_0907 0.90 +0.2
931,605 + -0.5
931,622 + +0.3
931,790 + +0.0
931,840 + B158DRAFT_0908 0.13 -0.7
931,932 + B158DRAFT_0908 0.22 -0.7
931,932 + B158DRAFT_0908 0.22 -0.3
931,932 + B158DRAFT_0908 0.22 +0.5
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 +0.0
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 +0.0
931,932 + B158DRAFT_0908 0.22 -0.3
931,932 + B158DRAFT_0908 0.22 -1.1
931,932 + B158DRAFT_0908 0.22 -0.1
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 -0.4
931,932 + B158DRAFT_0908 0.22 +0.7
931,932 + B158DRAFT_0908 0.22 -0.2
931,932 + B158DRAFT_0908 0.22 -0.9
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 -0.1
931,932 + B158DRAFT_0908 0.22 -0.1
931,932 + B158DRAFT_0908 0.22 -0.7
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.4
931,940 - B158DRAFT_0908 0.22 -0.7
931,940 - B158DRAFT_0908 0.22 -2.1
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.4
931,940 - B158DRAFT_0908 0.22 -1.7
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.1
931,940 - B158DRAFT_0908 0.22 +0.9
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -1.0
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 -0.6
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.0
931,940 - B158DRAFT_0908 0.22 -0.1
931,968 + B158DRAFT_0908 0.25 -0.3
931,976 + B158DRAFT_0908 0.26 -0.1
931,976 - B158DRAFT_0908 0.26 -0.7
932,071 + B158DRAFT_0908 0.35 -0.0
932,116 + B158DRAFT_0908 0.39 +0.5
932,124 - B158DRAFT_0908 0.40 -0.6
932,124 - B158DRAFT_0908 0.40 -0.2
932,236 - B158DRAFT_0908 0.51 +0.7
932,310 + B158DRAFT_0908 0.58 +0.1
932,351 + B158DRAFT_0908 0.62 +0.9
932,358 + B158DRAFT_0908 0.62 +0.3
932,358 + B158DRAFT_0908 0.62 +0.1
932,358 + B158DRAFT_0908 0.62 -0.4
932,398 + B158DRAFT_0908 0.66 -1.2
932,430 + B158DRAFT_0908 0.69 -0.2
932,445 - B158DRAFT_0908 0.71 +0.3
932,517 + B158DRAFT_0908 0.78 +1.0
932,517 + B158DRAFT_0908 0.78 +0.6
932,517 + B158DRAFT_0908 0.78 -0.3
932,517 + B158DRAFT_0908 0.78 +0.1
932,525 - B158DRAFT_0908 0.78 -0.7
932,525 - B158DRAFT_0908 0.78 +0.1
932,525 - B158DRAFT_0908 0.78 -0.2
932,533 + B158DRAFT_0908 0.79 -0.1
932,621 - B158DRAFT_0908 0.88 +0.0

Or see this region's nucleotide sequence