Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0784 and B158DRAFT_0785 are separated by 11 nucleotides B158DRAFT_0785 and B158DRAFT_0786 are separated by 21 nucleotides B158DRAFT_0786 and B158DRAFT_0787 are separated by 137 nucleotides B158DRAFT_0787 and B158DRAFT_0788 are separated by 90 nucleotides
B158DRAFT_0784: B158DRAFT_0784 - transcriptional regulator, TetR family, at 788,777 to 789,370
_0784
B158DRAFT_0785: B158DRAFT_0785 - hypothetical protein, at 789,382 to 790,347
_0785
B158DRAFT_0786: B158DRAFT_0786 - orotate phosphoribosyltransferase (EC 2.4.2.10), at 790,369 to 791,016
_0786
B158DRAFT_0787: B158DRAFT_0787 - PilZ domain., at 791,154 to 791,447
_0787
B158DRAFT_0788: B158DRAFT_0788 - dimethyladenosine transferase, at 791,538 to 792,347
_0788
Position (kb) 790
791
792 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 789.517 kb on - strand, within B158DRAFT_0785 at 789.527 kb on - strand, within B158DRAFT_0785 at 789.527 kb on - strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.682 kb on + strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.690 kb on - strand, within B158DRAFT_0785 at 789.746 kb on + strand, within B158DRAFT_0785 at 789.756 kb on + strand, within B158DRAFT_0785 at 789.776 kb on + strand, within B158DRAFT_0785 at 789.784 kb on - strand, within B158DRAFT_0785 at 789.789 kb on + strand, within B158DRAFT_0785 at 789.870 kb on + strand, within B158DRAFT_0785 at 789.870 kb on + strand, within B158DRAFT_0785 at 789.893 kb on + strand, within B158DRAFT_0785 at 789.901 kb on - strand, within B158DRAFT_0785 at 789.901 kb on - strand, within B158DRAFT_0785 at 790.040 kb on - strand, within B158DRAFT_0785 at 790.110 kb on - strand, within B158DRAFT_0785 at 790.126 kb on - strand, within B158DRAFT_0785 at 790.288 kb on + strand at 790.368 kb on + strand at 791.133 kb on - strand at 791.349 kb on - strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.384 kb on + strand, within B158DRAFT_0787 at 791.434 kb on + strand at 791.442 kb on - strand at 791.503 kb on + strand at 791.511 kb on - strand at 791.571 kb on + strand at 791.579 kb on - strand at 791.595 kb on + strand at 791.595 kb on + strand at 791.605 kb on + strand at 791.608 kb on - strand at 791.618 kb on + strand at 791.633 kb on + strand, within B158DRAFT_0788 at 791.680 kb on + strand, within B158DRAFT_0788 at 791.703 kb on + strand, within B158DRAFT_0788 at 791.727 kb on + strand, within B158DRAFT_0788 at 791.745 kb on + strand, within B158DRAFT_0788 at 791.758 kb on - strand, within B158DRAFT_0788 at 791.763 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.779 kb on - strand, within B158DRAFT_0788 at 791.813 kb on - strand, within B158DRAFT_0788 at 791.832 kb on - strand, within B158DRAFT_0788 at 791.889 kb on + strand, within B158DRAFT_0788 at 791.897 kb on + strand, within B158DRAFT_0788 at 791.905 kb on - strand, within B158DRAFT_0788 at 791.915 kb on - strand, within B158DRAFT_0788 at 791.955 kb on + strand, within B158DRAFT_0788 at 791.999 kb on - strand, within B158DRAFT_0788 at 792.006 kb on + strand, within B158DRAFT_0788
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 789,517 - B158DRAFT_0785 0.14 -0.1 789,527 - B158DRAFT_0785 0.15 -0.3 789,527 - B158DRAFT_0785 0.15 +0.1 789,682 + B158DRAFT_0785 0.31 -0.4 789,682 + B158DRAFT_0785 0.31 -0.1 789,682 + B158DRAFT_0785 0.31 -0.9 789,682 + B158DRAFT_0785 0.31 -0.2 789,682 + B158DRAFT_0785 0.31 -0.2 789,682 + B158DRAFT_0785 0.31 +0.6 789,682 + B158DRAFT_0785 0.31 +0.4 789,682 + B158DRAFT_0785 0.31 -0.3 789,690 - B158DRAFT_0785 0.32 +0.2 789,690 - B158DRAFT_0785 0.32 +0.2 789,690 - B158DRAFT_0785 0.32 +0.8 789,690 - B158DRAFT_0785 0.32 -0.2 789,690 - B158DRAFT_0785 0.32 +0.4 789,690 - B158DRAFT_0785 0.32 +0.6 789,690 - B158DRAFT_0785 0.32 +0.0 789,690 - B158DRAFT_0785 0.32 +0.1 789,690 - B158DRAFT_0785 0.32 -0.2 789,690 - B158DRAFT_0785 0.32 -0.5 789,690 - B158DRAFT_0785 0.32 -0.1 789,746 + B158DRAFT_0785 0.38 -0.7 789,756 + B158DRAFT_0785 0.39 -0.4 789,776 + B158DRAFT_0785 0.41 -0.4 789,784 - B158DRAFT_0785 0.42 +0.0 789,789 + B158DRAFT_0785 0.42 -0.1 789,870 + B158DRAFT_0785 0.51 -0.3 789,870 + B158DRAFT_0785 0.51 -0.7 789,893 + B158DRAFT_0785 0.53 -0.0 789,901 - B158DRAFT_0785 0.54 +0.1 789,901 - B158DRAFT_0785 0.54 +0.2 790,040 - B158DRAFT_0785 0.68 +0.0 790,110 - B158DRAFT_0785 0.75 +0.4 790,126 - B158DRAFT_0785 0.77 +1.1 790,288 + -0.3 790,368 + -0.7 791,133 - -1.0 791,349 - B158DRAFT_0787 0.66 -0.5 791,384 + B158DRAFT_0787 0.78 +0.1 791,384 + B158DRAFT_0787 0.78 -0.0 791,384 + B158DRAFT_0787 0.78 +0.1 791,384 + B158DRAFT_0787 0.78 +0.1 791,434 + -0.9 791,442 - +0.2 791,503 + +0.5 791,511 - -0.4 791,571 + -0.5 791,579 - -0.6 791,595 + +0.3 791,595 + +0.2 791,605 + -0.5 791,608 - -0.8 791,618 + -1.1 791,633 + B158DRAFT_0788 0.12 -1.1 791,680 + B158DRAFT_0788 0.18 -3.9 791,703 + B158DRAFT_0788 0.20 -0.5 791,727 + B158DRAFT_0788 0.23 -0.7 791,745 + B158DRAFT_0788 0.26 -1.0 791,758 - B158DRAFT_0788 0.27 -0.2 791,763 - B158DRAFT_0788 0.28 -1.1 791,779 - B158DRAFT_0788 0.30 -0.5 791,779 - B158DRAFT_0788 0.30 -1.3 791,813 - B158DRAFT_0788 0.34 -0.9 791,832 - B158DRAFT_0788 0.36 -0.1 791,889 + B158DRAFT_0788 0.43 -0.5 791,897 + B158DRAFT_0788 0.44 -0.9 791,905 - B158DRAFT_0788 0.45 -0.5 791,915 - B158DRAFT_0788 0.47 -0.3 791,955 + B158DRAFT_0788 0.51 -2.0 791,999 - B158DRAFT_0788 0.57 -0.9 792,006 + B158DRAFT_0788 0.58 -0.7
Or see this region's nucleotide sequence