Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0732

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0731 and B158DRAFT_0732 are separated by 80 nucleotidesB158DRAFT_0732 and B158DRAFT_0733 overlap by 11 nucleotides B158DRAFT_0731: B158DRAFT_0731 - Predicted permease, at 733,839 to 734,885 _0731 B158DRAFT_0732: B158DRAFT_0732 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 734,966 to 736,369 _0732 B158DRAFT_0733: B158DRAFT_0733 - The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family, at 736,359 to 739,517 _0733 Position (kb) 734 735 736 737Strain fitness (log2 ratio) -2 -1 0 1at 734.032 kb on - strand, within B158DRAFT_0731at 734.092 kb on + strand, within B158DRAFT_0731at 734.165 kb on + strand, within B158DRAFT_0731at 734.181 kb on - strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.200 kb on + strand, within B158DRAFT_0731at 734.200 kb on + strand, within B158DRAFT_0731at 734.201 kb on - strand, within B158DRAFT_0731at 734.208 kb on - strand, within B158DRAFT_0731at 734.300 kb on - strand, within B158DRAFT_0731at 734.403 kb on - strand, within B158DRAFT_0731at 734.408 kb on - strand, within B158DRAFT_0731at 734.439 kb on - strand, within B158DRAFT_0731at 734.450 kb on + strand, within B158DRAFT_0731at 734.458 kb on - strand, within B158DRAFT_0731at 734.463 kb on - strand, within B158DRAFT_0731at 734.463 kb on - strand, within B158DRAFT_0731at 734.503 kb on + strand, within B158DRAFT_0731at 734.601 kb on + strand, within B158DRAFT_0731at 734.653 kb on - strand, within B158DRAFT_0731at 734.712 kb on + strand, within B158DRAFT_0731at 734.713 kb on + strand, within B158DRAFT_0731at 734.727 kb on - strand, within B158DRAFT_0731at 734.775 kb on - strand, within B158DRAFT_0731at 734.778 kb on - strand, within B158DRAFT_0731at 734.863 kb on + strandat 734.863 kb on + strandat 734.863 kb on + strandat 734.871 kb on - strandat 734.871 kb on - strandat 735.005 kb on - strandat 735.007 kb on + strandat 735.007 kb on + strandat 735.015 kb on + strandat 735.046 kb on + strandat 735.053 kb on - strandat 735.063 kb on - strandat 735.104 kb on + strandat 735.109 kb on + strand, within B158DRAFT_0732at 735.114 kb on + strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.140 kb on - strand, within B158DRAFT_0732at 735.140 kb on - strand, within B158DRAFT_0732at 735.157 kb on - strand, within B158DRAFT_0732at 735.234 kb on - strand, within B158DRAFT_0732at 735.234 kb on - strand, within B158DRAFT_0732at 735.241 kb on + strand, within B158DRAFT_0732at 735.248 kb on + strand, within B158DRAFT_0732at 735.249 kb on - strand, within B158DRAFT_0732at 735.253 kb on + strand, within B158DRAFT_0732at 735.277 kb on - strand, within B158DRAFT_0732at 735.294 kb on + strand, within B158DRAFT_0732at 735.302 kb on - strand, within B158DRAFT_0732at 735.308 kb on + strand, within B158DRAFT_0732at 735.440 kb on - strand, within B158DRAFT_0732at 735.477 kb on + strand, within B158DRAFT_0732at 735.485 kb on - strand, within B158DRAFT_0732at 735.485 kb on - strand, within B158DRAFT_0732at 735.521 kb on - strand, within B158DRAFT_0732at 735.526 kb on - strand, within B158DRAFT_0732at 735.560 kb on + strand, within B158DRAFT_0732at 735.605 kb on - strand, within B158DRAFT_0732at 735.610 kb on - strand, within B158DRAFT_0732at 735.648 kb on + strand, within B158DRAFT_0732at 735.656 kb on - strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.707 kb on - strand, within B158DRAFT_0732at 735.734 kb on + strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.878 kb on + strand, within B158DRAFT_0732at 735.879 kb on + strand, within B158DRAFT_0732at 735.897 kb on + strand, within B158DRAFT_0732at 735.897 kb on + strand, within B158DRAFT_0732at 735.905 kb on - strand, within B158DRAFT_0732at 735.907 kb on + strand, within B158DRAFT_0732at 735.918 kb on + strand, within B158DRAFT_0732at 736.013 kb on + strand, within B158DRAFT_0732at 736.101 kb on + strand, within B158DRAFT_0732at 736.234 kb on + strandat 736.241 kb on - strandat 736.262 kb on + strandat 736.274 kb on + strandat 736.302 kb on + strandat 736.353 kb on - strandat 736.382 kb on - strandat 736.448 kb on - strandat 736.489 kb on + strandat 736.489 kb on + strandat 736.494 kb on + strandat 736.497 kb on - strandat 736.502 kb on - strandat 736.507 kb on - strandat 736.507 kb on - strandat 736.507 kb on - strandat 736.537 kb on - strandat 736.653 kb on + strandat 736.680 kb on + strand, within B158DRAFT_0733at 736.688 kb on - strand, within B158DRAFT_0733at 736.767 kb on - strand, within B158DRAFT_0733at 736.786 kb on + strand, within B158DRAFT_0733at 736.826 kb on - strand, within B158DRAFT_0733at 736.831 kb on - strand, within B158DRAFT_0733at 736.853 kb on + strand, within B158DRAFT_0733at 736.868 kb on + strand, within B158DRAFT_0733at 736.895 kb on - strand, within B158DRAFT_0733at 736.895 kb on - strand, within B158DRAFT_0733at 736.895 kb on - strand, within B158DRAFT_0733at 736.895 kb on - strand, within B158DRAFT_0733at 736.912 kb on + strand, within B158DRAFT_0733at 736.926 kb on + strand, within B158DRAFT_0733at 736.926 kb on + strand, within B158DRAFT_0733at 736.939 kb on - strand, within B158DRAFT_0733at 736.974 kb on + strand, within B158DRAFT_0733at 736.989 kb on + strand, within B158DRAFT_0733at 737.031 kb on + strand, within B158DRAFT_0733at 737.036 kb on + strand, within B158DRAFT_0733at 737.094 kb on - strand, within B158DRAFT_0733at 737.152 kb on + strand, within B158DRAFT_0733at 737.175 kb on - strand, within B158DRAFT_0733at 737.175 kb on - strand, within B158DRAFT_0733at 737.197 kb on + strand, within B158DRAFT_0733at 737.205 kb on - strand, within B158DRAFT_0733at 737.210 kb on - strand, within B158DRAFT_0733at 737.250 kb on + strand, within B158DRAFT_0733at 737.296 kb on + strand, within B158DRAFT_0733at 737.296 kb on + strand, within B158DRAFT_0733at 737.309 kb on + strand, within B158DRAFT_0733at 737.332 kb on - strand, within B158DRAFT_0733at 737.367 kb on + strand, within B158DRAFT_0733

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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734,032 - B158DRAFT_0731 0.18 -0.2
734,092 + B158DRAFT_0731 0.24 -0.5
734,165 + B158DRAFT_0731 0.31 -0.4
734,181 - B158DRAFT_0731 0.33 -0.8
734,185 + B158DRAFT_0731 0.33 -0.7
734,185 + B158DRAFT_0731 0.33 -0.9
734,185 + B158DRAFT_0731 0.33 -0.0
734,193 - B158DRAFT_0731 0.34 -0.2
734,193 - B158DRAFT_0731 0.34 -0.8
734,193 - B158DRAFT_0731 0.34 -1.5
734,193 - B158DRAFT_0731 0.34 -1.0
734,193 - B158DRAFT_0731 0.34 -1.5
734,193 - B158DRAFT_0731 0.34 -0.6
734,200 + B158DRAFT_0731 0.34 -0.6
734,200 + B158DRAFT_0731 0.34 -1.8
734,201 - B158DRAFT_0731 0.35 -2.0
734,208 - B158DRAFT_0731 0.35 -0.7
734,300 - B158DRAFT_0731 0.44 -0.1
734,403 - B158DRAFT_0731 0.54 -0.8
734,408 - B158DRAFT_0731 0.54 +0.0
734,439 - B158DRAFT_0731 0.57 +0.7
734,450 + B158DRAFT_0731 0.58 +0.2
734,458 - B158DRAFT_0731 0.59 -0.6
734,463 - B158DRAFT_0731 0.60 -0.8
734,463 - B158DRAFT_0731 0.60 -1.4
734,503 + B158DRAFT_0731 0.63 -0.2
734,601 + B158DRAFT_0731 0.73 -0.3
734,653 - B158DRAFT_0731 0.78 -0.6
734,712 + B158DRAFT_0731 0.83 -1.0
734,713 + B158DRAFT_0731 0.83 -0.8
734,727 - B158DRAFT_0731 0.85 -0.5
734,775 - B158DRAFT_0731 0.89 -2.4
734,778 - B158DRAFT_0731 0.90 -0.5
734,863 + -0.6
734,863 + +0.2
734,863 + -1.4
734,871 - -0.4
734,871 - -0.5
735,005 - +0.3
735,007 + -0.1
735,007 + -0.8
735,015 + -1.2
735,046 + -0.2
735,053 - -1.3
735,063 - -0.3
735,104 + -0.2
735,109 + B158DRAFT_0732 0.10 -0.1
735,114 + B158DRAFT_0732 0.11 -0.1
735,122 - B158DRAFT_0732 0.11 -0.2
735,122 - B158DRAFT_0732 0.11 -1.2
735,122 - B158DRAFT_0732 0.11 -0.7
735,122 - B158DRAFT_0732 0.11 -0.4
735,140 - B158DRAFT_0732 0.12 -0.1
735,140 - B158DRAFT_0732 0.12 -0.7
735,157 - B158DRAFT_0732 0.14 +0.0
735,234 - B158DRAFT_0732 0.19 -0.0
735,234 - B158DRAFT_0732 0.19 -0.1
735,241 + B158DRAFT_0732 0.20 -0.3
735,248 + B158DRAFT_0732 0.20 -1.0
735,249 - B158DRAFT_0732 0.20 +1.1
735,253 + B158DRAFT_0732 0.20 +0.1
735,277 - B158DRAFT_0732 0.22 -0.2
735,294 + B158DRAFT_0732 0.23 -1.3
735,302 - B158DRAFT_0732 0.24 -0.2
735,308 + B158DRAFT_0732 0.24 +0.0
735,440 - B158DRAFT_0732 0.34 +0.0
735,477 + B158DRAFT_0732 0.36 -0.5
735,485 - B158DRAFT_0732 0.37 -0.6
735,485 - B158DRAFT_0732 0.37 -0.1
735,521 - B158DRAFT_0732 0.40 -0.1
735,526 - B158DRAFT_0732 0.40 -1.0
735,560 + B158DRAFT_0732 0.42 +0.2
735,605 - B158DRAFT_0732 0.46 -1.3
735,610 - B158DRAFT_0732 0.46 -0.1
735,648 + B158DRAFT_0732 0.49 +0.2
735,656 - B158DRAFT_0732 0.49 -1.2
735,699 + B158DRAFT_0732 0.52 -2.5
735,699 + B158DRAFT_0732 0.52 -0.7
735,699 + B158DRAFT_0732 0.52 -0.3
735,699 + B158DRAFT_0732 0.52 -0.4
735,699 + B158DRAFT_0732 0.52 -0.7
735,707 - B158DRAFT_0732 0.53 +0.5
735,734 + B158DRAFT_0732 0.55 -0.5
735,768 - B158DRAFT_0732 0.57 -0.7
735,768 - B158DRAFT_0732 0.57 +0.2
735,768 - B158DRAFT_0732 0.57 -0.4
735,768 - B158DRAFT_0732 0.57 -0.2
735,878 + B158DRAFT_0732 0.65 +0.2
735,879 + B158DRAFT_0732 0.65 -0.4
735,897 + B158DRAFT_0732 0.66 -0.1
735,897 + B158DRAFT_0732 0.66 -0.4
735,905 - B158DRAFT_0732 0.67 -0.3
735,907 + B158DRAFT_0732 0.67 -0.8
735,918 + B158DRAFT_0732 0.68 -0.4
736,013 + B158DRAFT_0732 0.75 -0.6
736,101 + B158DRAFT_0732 0.81 -0.6
736,234 + -0.3
736,241 - -0.3
736,262 + -0.3
736,274 + -0.6
736,302 + -0.4
736,353 - -0.5
736,382 - -0.5
736,448 - -0.2
736,489 + -0.5
736,489 + -0.7
736,494 + +0.0
736,497 - +0.0
736,502 - +0.4
736,507 - -0.2
736,507 - -0.5
736,507 - +0.3
736,537 - -0.3
736,653 + -0.3
736,680 + B158DRAFT_0733 0.10 -0.3
736,688 - B158DRAFT_0733 0.10 -1.3
736,767 - B158DRAFT_0733 0.13 -0.5
736,786 + B158DRAFT_0733 0.14 -0.7
736,826 - B158DRAFT_0733 0.15 +0.5
736,831 - B158DRAFT_0733 0.15 -0.7
736,853 + B158DRAFT_0733 0.16 -0.2
736,868 + B158DRAFT_0733 0.16 -0.6
736,895 - B158DRAFT_0733 0.17 -0.0
736,895 - B158DRAFT_0733 0.17 -0.1
736,895 - B158DRAFT_0733 0.17 -0.5
736,895 - B158DRAFT_0733 0.17 +0.1
736,912 + B158DRAFT_0733 0.18 -0.2
736,926 + B158DRAFT_0733 0.18 -0.6
736,926 + B158DRAFT_0733 0.18 +0.1
736,939 - B158DRAFT_0733 0.18 -0.4
736,974 + B158DRAFT_0733 0.19 -0.7
736,989 + B158DRAFT_0733 0.20 -0.0
737,031 + B158DRAFT_0733 0.21 -0.4
737,036 + B158DRAFT_0733 0.21 +0.0
737,094 - B158DRAFT_0733 0.23 -0.7
737,152 + B158DRAFT_0733 0.25 -0.8
737,175 - B158DRAFT_0733 0.26 -0.3
737,175 - B158DRAFT_0733 0.26 -0.5
737,197 + B158DRAFT_0733 0.27 -0.3
737,205 - B158DRAFT_0733 0.27 -0.9
737,210 - B158DRAFT_0733 0.27 -1.0
737,250 + B158DRAFT_0733 0.28 -0.2
737,296 + B158DRAFT_0733 0.30 -1.0
737,296 + B158DRAFT_0733 0.30 -0.9
737,309 + B158DRAFT_0733 0.30 -0.1
737,332 - B158DRAFT_0733 0.31 -0.9
737,367 + B158DRAFT_0733 0.32 -0.2

Or see this region's nucleotide sequence