Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0731

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0729 and B158DRAFT_0730 are separated by 26 nucleotidesB158DRAFT_0730 and B158DRAFT_0731 are separated by 88 nucleotidesB158DRAFT_0731 and B158DRAFT_0732 are separated by 80 nucleotides B158DRAFT_0729: B158DRAFT_0729 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 731,043 to 732,920 _0729 B158DRAFT_0730: B158DRAFT_0730 - Sec-independent protein translocase TatD (EC 3.1.21.-), at 732,947 to 733,750 _0730 B158DRAFT_0731: B158DRAFT_0731 - Predicted permease, at 733,839 to 734,885 _0731 B158DRAFT_0732: B158DRAFT_0732 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 734,966 to 736,369 _0732 Position (kb) 733 734 735Strain fitness (log2 ratio) -2 -1 0 1at 732.844 kb on - strandat 733.025 kb on + strandat 733.123 kb on - strand, within B158DRAFT_0730at 733.226 kb on + strand, within B158DRAFT_0730at 733.231 kb on + strand, within B158DRAFT_0730at 733.231 kb on + strand, within B158DRAFT_0730at 733.243 kb on + strand, within B158DRAFT_0730at 733.337 kb on + strand, within B158DRAFT_0730at 733.372 kb on + strand, within B158DRAFT_0730at 733.379 kb on + strand, within B158DRAFT_0730at 733.384 kb on + strand, within B158DRAFT_0730at 733.387 kb on - strand, within B158DRAFT_0730at 733.404 kb on + strand, within B158DRAFT_0730at 733.404 kb on + strand, within B158DRAFT_0730at 733.409 kb on + strand, within B158DRAFT_0730at 733.412 kb on - strand, within B158DRAFT_0730at 733.450 kb on - strand, within B158DRAFT_0730at 733.466 kb on + strand, within B158DRAFT_0730at 733.481 kb on - strand, within B158DRAFT_0730at 733.481 kb on - strand, within B158DRAFT_0730at 733.521 kb on + strand, within B158DRAFT_0730at 733.536 kb on - strand, within B158DRAFT_0730at 733.587 kb on + strand, within B158DRAFT_0730at 733.587 kb on + strand, within B158DRAFT_0730at 733.644 kb on - strand, within B158DRAFT_0730at 733.645 kb on - strand, within B158DRAFT_0730at 733.700 kb on + strandat 733.713 kb on - strandat 733.740 kb on - strandat 733.852 kb on + strandat 733.908 kb on + strandat 733.908 kb on + strandat 733.946 kb on - strand, within B158DRAFT_0731at 734.032 kb on - strand, within B158DRAFT_0731at 734.092 kb on + strand, within B158DRAFT_0731at 734.165 kb on + strand, within B158DRAFT_0731at 734.181 kb on - strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.185 kb on + strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.193 kb on - strand, within B158DRAFT_0731at 734.200 kb on + strand, within B158DRAFT_0731at 734.200 kb on + strand, within B158DRAFT_0731at 734.201 kb on - strand, within B158DRAFT_0731at 734.208 kb on - strand, within B158DRAFT_0731at 734.300 kb on - strand, within B158DRAFT_0731at 734.403 kb on - strand, within B158DRAFT_0731at 734.408 kb on - strand, within B158DRAFT_0731at 734.439 kb on - strand, within B158DRAFT_0731at 734.450 kb on + strand, within B158DRAFT_0731at 734.458 kb on - strand, within B158DRAFT_0731at 734.463 kb on - strand, within B158DRAFT_0731at 734.463 kb on - strand, within B158DRAFT_0731at 734.503 kb on + strand, within B158DRAFT_0731at 734.601 kb on + strand, within B158DRAFT_0731at 734.653 kb on - strand, within B158DRAFT_0731at 734.712 kb on + strand, within B158DRAFT_0731at 734.713 kb on + strand, within B158DRAFT_0731at 734.727 kb on - strand, within B158DRAFT_0731at 734.775 kb on - strand, within B158DRAFT_0731at 734.778 kb on - strand, within B158DRAFT_0731at 734.863 kb on + strandat 734.863 kb on + strandat 734.863 kb on + strandat 734.871 kb on - strandat 734.871 kb on - strandat 735.005 kb on - strandat 735.007 kb on + strandat 735.007 kb on + strandat 735.015 kb on + strandat 735.046 kb on + strandat 735.053 kb on - strandat 735.063 kb on - strandat 735.104 kb on + strandat 735.109 kb on + strand, within B158DRAFT_0732at 735.114 kb on + strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.122 kb on - strand, within B158DRAFT_0732at 735.140 kb on - strand, within B158DRAFT_0732at 735.140 kb on - strand, within B158DRAFT_0732at 735.157 kb on - strand, within B158DRAFT_0732at 735.234 kb on - strand, within B158DRAFT_0732at 735.234 kb on - strand, within B158DRAFT_0732at 735.241 kb on + strand, within B158DRAFT_0732at 735.248 kb on + strand, within B158DRAFT_0732at 735.249 kb on - strand, within B158DRAFT_0732at 735.253 kb on + strand, within B158DRAFT_0732at 735.277 kb on - strand, within B158DRAFT_0732at 735.294 kb on + strand, within B158DRAFT_0732at 735.302 kb on - strand, within B158DRAFT_0732at 735.308 kb on + strand, within B158DRAFT_0732at 735.440 kb on - strand, within B158DRAFT_0732at 735.477 kb on + strand, within B158DRAFT_0732at 735.485 kb on - strand, within B158DRAFT_0732at 735.485 kb on - strand, within B158DRAFT_0732at 735.521 kb on - strand, within B158DRAFT_0732at 735.526 kb on - strand, within B158DRAFT_0732at 735.560 kb on + strand, within B158DRAFT_0732at 735.605 kb on - strand, within B158DRAFT_0732at 735.610 kb on - strand, within B158DRAFT_0732at 735.648 kb on + strand, within B158DRAFT_0732at 735.656 kb on - strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.699 kb on + strand, within B158DRAFT_0732at 735.707 kb on - strand, within B158DRAFT_0732at 735.734 kb on + strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.768 kb on - strand, within B158DRAFT_0732at 735.878 kb on + strand, within B158DRAFT_0732at 735.879 kb on + strand, within B158DRAFT_0732

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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732,844 - -0.0
733,025 + -0.1
733,123 - B158DRAFT_0730 0.22 +1.1
733,226 + B158DRAFT_0730 0.35 -0.2
733,231 + B158DRAFT_0730 0.35 -0.1
733,231 + B158DRAFT_0730 0.35 -0.1
733,243 + B158DRAFT_0730 0.37 -0.0
733,337 + B158DRAFT_0730 0.49 +0.2
733,372 + B158DRAFT_0730 0.53 -0.5
733,379 + B158DRAFT_0730 0.54 -0.1
733,384 + B158DRAFT_0730 0.54 -0.5
733,387 - B158DRAFT_0730 0.55 -0.1
733,404 + B158DRAFT_0730 0.57 +0.5
733,404 + B158DRAFT_0730 0.57 -0.0
733,409 + B158DRAFT_0730 0.57 -0.3
733,412 - B158DRAFT_0730 0.58 +0.0
733,450 - B158DRAFT_0730 0.63 -0.3
733,466 + B158DRAFT_0730 0.65 +0.6
733,481 - B158DRAFT_0730 0.66 +0.4
733,481 - B158DRAFT_0730 0.66 -0.0
733,521 + B158DRAFT_0730 0.71 -0.3
733,536 - B158DRAFT_0730 0.73 -0.0
733,587 + B158DRAFT_0730 0.80 -0.9
733,587 + B158DRAFT_0730 0.80 -0.2
733,644 - B158DRAFT_0730 0.87 +0.5
733,645 - B158DRAFT_0730 0.87 +0.4
733,700 + -0.2
733,713 - -1.8
733,740 - -0.1
733,852 + -1.3
733,908 + -0.9
733,908 + -0.1
733,946 - B158DRAFT_0731 0.10 -2.4
734,032 - B158DRAFT_0731 0.18 -0.2
734,092 + B158DRAFT_0731 0.24 -0.5
734,165 + B158DRAFT_0731 0.31 -0.4
734,181 - B158DRAFT_0731 0.33 -0.8
734,185 + B158DRAFT_0731 0.33 -0.7
734,185 + B158DRAFT_0731 0.33 -0.9
734,185 + B158DRAFT_0731 0.33 -0.0
734,193 - B158DRAFT_0731 0.34 -0.2
734,193 - B158DRAFT_0731 0.34 -0.8
734,193 - B158DRAFT_0731 0.34 -1.5
734,193 - B158DRAFT_0731 0.34 -1.0
734,193 - B158DRAFT_0731 0.34 -1.5
734,193 - B158DRAFT_0731 0.34 -0.6
734,200 + B158DRAFT_0731 0.34 -0.6
734,200 + B158DRAFT_0731 0.34 -1.8
734,201 - B158DRAFT_0731 0.35 -2.0
734,208 - B158DRAFT_0731 0.35 -0.7
734,300 - B158DRAFT_0731 0.44 -0.1
734,403 - B158DRAFT_0731 0.54 -0.8
734,408 - B158DRAFT_0731 0.54 +0.0
734,439 - B158DRAFT_0731 0.57 +0.7
734,450 + B158DRAFT_0731 0.58 +0.2
734,458 - B158DRAFT_0731 0.59 -0.6
734,463 - B158DRAFT_0731 0.60 -0.8
734,463 - B158DRAFT_0731 0.60 -1.4
734,503 + B158DRAFT_0731 0.63 -0.2
734,601 + B158DRAFT_0731 0.73 -0.3
734,653 - B158DRAFT_0731 0.78 -0.6
734,712 + B158DRAFT_0731 0.83 -1.0
734,713 + B158DRAFT_0731 0.83 -0.8
734,727 - B158DRAFT_0731 0.85 -0.5
734,775 - B158DRAFT_0731 0.89 -2.4
734,778 - B158DRAFT_0731 0.90 -0.5
734,863 + -0.6
734,863 + +0.2
734,863 + -1.4
734,871 - -0.4
734,871 - -0.5
735,005 - +0.3
735,007 + -0.1
735,007 + -0.8
735,015 + -1.2
735,046 + -0.2
735,053 - -1.3
735,063 - -0.3
735,104 + -0.2
735,109 + B158DRAFT_0732 0.10 -0.1
735,114 + B158DRAFT_0732 0.11 -0.1
735,122 - B158DRAFT_0732 0.11 -0.2
735,122 - B158DRAFT_0732 0.11 -1.2
735,122 - B158DRAFT_0732 0.11 -0.7
735,122 - B158DRAFT_0732 0.11 -0.4
735,140 - B158DRAFT_0732 0.12 -0.1
735,140 - B158DRAFT_0732 0.12 -0.7
735,157 - B158DRAFT_0732 0.14 +0.0
735,234 - B158DRAFT_0732 0.19 -0.0
735,234 - B158DRAFT_0732 0.19 -0.1
735,241 + B158DRAFT_0732 0.20 -0.3
735,248 + B158DRAFT_0732 0.20 -1.0
735,249 - B158DRAFT_0732 0.20 +1.1
735,253 + B158DRAFT_0732 0.20 +0.1
735,277 - B158DRAFT_0732 0.22 -0.2
735,294 + B158DRAFT_0732 0.23 -1.3
735,302 - B158DRAFT_0732 0.24 -0.2
735,308 + B158DRAFT_0732 0.24 +0.0
735,440 - B158DRAFT_0732 0.34 +0.0
735,477 + B158DRAFT_0732 0.36 -0.5
735,485 - B158DRAFT_0732 0.37 -0.6
735,485 - B158DRAFT_0732 0.37 -0.1
735,521 - B158DRAFT_0732 0.40 -0.1
735,526 - B158DRAFT_0732 0.40 -1.0
735,560 + B158DRAFT_0732 0.42 +0.2
735,605 - B158DRAFT_0732 0.46 -1.3
735,610 - B158DRAFT_0732 0.46 -0.1
735,648 + B158DRAFT_0732 0.49 +0.2
735,656 - B158DRAFT_0732 0.49 -1.2
735,699 + B158DRAFT_0732 0.52 -2.5
735,699 + B158DRAFT_0732 0.52 -0.7
735,699 + B158DRAFT_0732 0.52 -0.3
735,699 + B158DRAFT_0732 0.52 -0.4
735,699 + B158DRAFT_0732 0.52 -0.7
735,707 - B158DRAFT_0732 0.53 +0.5
735,734 + B158DRAFT_0732 0.55 -0.5
735,768 - B158DRAFT_0732 0.57 -0.7
735,768 - B158DRAFT_0732 0.57 +0.2
735,768 - B158DRAFT_0732 0.57 -0.4
735,768 - B158DRAFT_0732 0.57 -0.2
735,878 + B158DRAFT_0732 0.65 +0.2
735,879 + B158DRAFT_0732 0.65 -0.4

Or see this region's nucleotide sequence