Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0675

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0674 and B158DRAFT_0675 are separated by 23 nucleotidesB158DRAFT_0675 and B158DRAFT_0676 are separated by 0 nucleotides B158DRAFT_0674: B158DRAFT_0674 - putative efflux protein, MATE family, at 675,870 to 677,246 _0674 B158DRAFT_0675: B158DRAFT_0675 - ADP-heptose:LPS heptosyltransferase, at 677,270 to 678,298 _0675 B158DRAFT_0676: B158DRAFT_0676 - Lauroyl/myristoyl acyltransferase, at 678,299 to 679,789 _0676 Position (kb) 677 678 679Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 676.280 kb on - strand, within B158DRAFT_0674at 676.284 kb on + strand, within B158DRAFT_0674at 676.285 kb on - strand, within B158DRAFT_0674at 676.302 kb on + strand, within B158DRAFT_0674at 676.310 kb on - strand, within B158DRAFT_0674at 676.447 kb on + strand, within B158DRAFT_0674at 676.468 kb on + strand, within B158DRAFT_0674at 676.476 kb on - strand, within B158DRAFT_0674at 676.478 kb on + strand, within B158DRAFT_0674at 676.481 kb on - strand, within B158DRAFT_0674at 676.497 kb on - strand, within B158DRAFT_0674at 676.507 kb on - strand, within B158DRAFT_0674at 676.512 kb on - strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.672 kb on + strand, within B158DRAFT_0674at 676.680 kb on - strand, within B158DRAFT_0674at 676.680 kb on - strand, within B158DRAFT_0674at 676.680 kb on - strand, within B158DRAFT_0674at 676.794 kb on + strand, within B158DRAFT_0674at 676.826 kb on + strand, within B158DRAFT_0674at 676.851 kb on + strand, within B158DRAFT_0674at 676.930 kb on + strand, within B158DRAFT_0674at 676.942 kb on + strand, within B158DRAFT_0674at 676.943 kb on + strand, within B158DRAFT_0674at 676.943 kb on + strand, within B158DRAFT_0674at 676.950 kb on - strand, within B158DRAFT_0674at 676.951 kb on - strand, within B158DRAFT_0674at 676.951 kb on - strand, within B158DRAFT_0674at 677.067 kb on + strand, within B158DRAFT_0674at 677.078 kb on - strand, within B158DRAFT_0674at 677.078 kb on - strand, within B158DRAFT_0674at 677.143 kb on + strandat 677.151 kb on - strandat 677.175 kb on - strandat 677.179 kb on + strandat 677.179 kb on + strandat 677.187 kb on - strandat 677.227 kb on - strandat 677.352 kb on + strandat 677.352 kb on + strandat 677.398 kb on - strand, within B158DRAFT_0675at 677.407 kb on + strand, within B158DRAFT_0675at 677.415 kb on - strand, within B158DRAFT_0675at 677.522 kb on + strand, within B158DRAFT_0675at 677.522 kb on + strand, within B158DRAFT_0675at 677.530 kb on - strand, within B158DRAFT_0675at 677.662 kb on - strand, within B158DRAFT_0675at 677.705 kb on + strand, within B158DRAFT_0675at 677.705 kb on + strand, within B158DRAFT_0675at 677.715 kb on + strand, within B158DRAFT_0675at 677.725 kb on - strand, within B158DRAFT_0675at 677.746 kb on - strand, within B158DRAFT_0675at 677.780 kb on + strand, within B158DRAFT_0675at 677.787 kb on + strand, within B158DRAFT_0675at 677.795 kb on - strand, within B158DRAFT_0675at 677.795 kb on - strand, within B158DRAFT_0675at 677.827 kb on + strand, within B158DRAFT_0675at 677.855 kb on - strand, within B158DRAFT_0675at 678.005 kb on + strand, within B158DRAFT_0675at 678.065 kb on + strand, within B158DRAFT_0675at 678.073 kb on - strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.096 kb on + strand, within B158DRAFT_0675at 678.126 kb on + strand, within B158DRAFT_0675at 678.144 kb on - strand, within B158DRAFT_0675at 678.144 kb on - strand, within B158DRAFT_0675at 678.167 kb on + strand, within B158DRAFT_0675at 678.167 kb on - strand, within B158DRAFT_0675at 678.175 kb on - strand, within B158DRAFT_0675at 678.218 kb on + strandat 678.221 kb on - strandat 678.249 kb on + strandat 678.249 kb on + strandat 678.257 kb on - strandat 678.257 kb on - strandat 678.309 kb on + strandat 678.311 kb on - strandat 678.317 kb on - strandat 678.324 kb on + strandat 678.522 kb on - strand, within B158DRAFT_0676at 678.532 kb on - strand, within B158DRAFT_0676at 678.532 kb on - strand, within B158DRAFT_0676at 678.553 kb on + strand, within B158DRAFT_0676at 678.597 kb on - strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.610 kb on + strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.618 kb on - strand, within B158DRAFT_0676at 678.652 kb on + strand, within B158DRAFT_0676at 678.661 kb on + strand, within B158DRAFT_0676at 678.692 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.754 kb on + strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.762 kb on - strand, within B158DRAFT_0676at 678.798 kb on + strand, within B158DRAFT_0676at 678.830 kb on + strand, within B158DRAFT_0676at 678.838 kb on - strand, within B158DRAFT_0676at 678.844 kb on - strand, within B158DRAFT_0676at 678.868 kb on + strand, within B158DRAFT_0676at 678.876 kb on - strand, within B158DRAFT_0676at 678.944 kb on - strand, within B158DRAFT_0676at 678.957 kb on + strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 679.031 kb on - strand, within B158DRAFT_0676at 679.052 kb on + strand, within B158DRAFT_0676at 679.060 kb on - strand, within B158DRAFT_0676at 679.078 kb on - strand, within B158DRAFT_0676at 679.108 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.124 kb on - strand, within B158DRAFT_0676at 679.138 kb on + strand, within B158DRAFT_0676at 679.156 kb on - strand, within B158DRAFT_0676at 679.226 kb on - strand, within B158DRAFT_0676at 679.291 kb on + strand, within B158DRAFT_0676

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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676,280 - B158DRAFT_0674 0.30 +0.1
676,284 + B158DRAFT_0674 0.30 -0.3
676,285 - B158DRAFT_0674 0.30 -0.3
676,302 + B158DRAFT_0674 0.31 +0.5
676,310 - B158DRAFT_0674 0.32 -1.4
676,447 + B158DRAFT_0674 0.42 -0.4
676,468 + B158DRAFT_0674 0.43 -0.8
676,476 - B158DRAFT_0674 0.44 -0.4
676,478 + B158DRAFT_0674 0.44 -0.6
676,481 - B158DRAFT_0674 0.44 -0.5
676,497 - B158DRAFT_0674 0.46 +0.0
676,507 - B158DRAFT_0674 0.46 -0.1
676,512 - B158DRAFT_0674 0.47 +0.3
676,672 + B158DRAFT_0674 0.58 -0.3
676,672 + B158DRAFT_0674 0.58 -0.9
676,672 + B158DRAFT_0674 0.58 -0.6
676,672 + B158DRAFT_0674 0.58 -0.7
676,672 + B158DRAFT_0674 0.58 +0.2
676,672 + B158DRAFT_0674 0.58 -0.3
676,672 + B158DRAFT_0674 0.58 -0.8
676,680 - B158DRAFT_0674 0.59 -0.1
676,680 - B158DRAFT_0674 0.59 +0.1
676,680 - B158DRAFT_0674 0.59 +0.1
676,794 + B158DRAFT_0674 0.67 -0.3
676,826 + B158DRAFT_0674 0.69 -0.1
676,851 + B158DRAFT_0674 0.71 -0.6
676,930 + B158DRAFT_0674 0.77 -0.6
676,942 + B158DRAFT_0674 0.78 -1.0
676,943 + B158DRAFT_0674 0.78 +0.1
676,943 + B158DRAFT_0674 0.78 -0.0
676,950 - B158DRAFT_0674 0.78 -0.3
676,951 - B158DRAFT_0674 0.79 -0.3
676,951 - B158DRAFT_0674 0.79 -0.7
677,067 + B158DRAFT_0674 0.87 -0.2
677,078 - B158DRAFT_0674 0.88 -0.2
677,078 - B158DRAFT_0674 0.88 -0.5
677,143 + +0.2
677,151 - -0.5
677,175 - -0.6
677,179 + +0.4
677,179 + -0.7
677,187 - -0.5
677,227 - +0.1
677,352 + +0.2
677,352 + +0.3
677,398 - B158DRAFT_0675 0.12 -0.6
677,407 + B158DRAFT_0675 0.13 -0.7
677,415 - B158DRAFT_0675 0.14 -0.3
677,522 + B158DRAFT_0675 0.24 -0.2
677,522 + B158DRAFT_0675 0.24 -0.1
677,530 - B158DRAFT_0675 0.25 -0.8
677,662 - B158DRAFT_0675 0.38 +0.4
677,705 + B158DRAFT_0675 0.42 -0.2
677,705 + B158DRAFT_0675 0.42 +0.2
677,715 + B158DRAFT_0675 0.43 -0.8
677,725 - B158DRAFT_0675 0.44 +0.1
677,746 - B158DRAFT_0675 0.46 +1.3
677,780 + B158DRAFT_0675 0.50 -1.1
677,787 + B158DRAFT_0675 0.50 +0.3
677,795 - B158DRAFT_0675 0.51 -0.0
677,795 - B158DRAFT_0675 0.51 -0.0
677,827 + B158DRAFT_0675 0.54 -0.0
677,855 - B158DRAFT_0675 0.57 -1.3
678,005 + B158DRAFT_0675 0.71 -0.4
678,065 + B158DRAFT_0675 0.77 +0.3
678,073 - B158DRAFT_0675 0.78 -0.5
678,096 + B158DRAFT_0675 0.80 +0.0
678,096 + B158DRAFT_0675 0.80 +0.0
678,096 + B158DRAFT_0675 0.80 -0.2
678,126 + B158DRAFT_0675 0.83 +0.1
678,144 - B158DRAFT_0675 0.85 +0.9
678,144 - B158DRAFT_0675 0.85 -0.1
678,167 + B158DRAFT_0675 0.87 -0.8
678,167 - B158DRAFT_0675 0.87 -0.2
678,175 - B158DRAFT_0675 0.88 +0.3
678,218 + +0.1
678,221 - +0.5
678,249 + +0.1
678,249 + -0.2
678,257 - -0.0
678,257 - -0.2
678,309 + -1.0
678,311 - +0.2
678,317 - -0.3
678,324 + -1.7
678,522 - B158DRAFT_0676 0.15 -0.6
678,532 - B158DRAFT_0676 0.16 -0.8
678,532 - B158DRAFT_0676 0.16 -0.7
678,553 + B158DRAFT_0676 0.17 -2.0
678,597 - B158DRAFT_0676 0.20 -2.4
678,610 + B158DRAFT_0676 0.21 -0.8
678,610 + B158DRAFT_0676 0.21 -1.0
678,610 + B158DRAFT_0676 0.21 -1.6
678,610 + B158DRAFT_0676 0.21 -2.3
678,610 + B158DRAFT_0676 0.21 -1.0
678,610 + B158DRAFT_0676 0.21 -1.1
678,610 + B158DRAFT_0676 0.21 -0.9
678,610 + B158DRAFT_0676 0.21 -1.6
678,610 + B158DRAFT_0676 0.21 -1.7
678,610 + B158DRAFT_0676 0.21 -1.3
678,618 - B158DRAFT_0676 0.21 -0.5
678,618 - B158DRAFT_0676 0.21 -1.5
678,618 - B158DRAFT_0676 0.21 -1.6
678,618 - B158DRAFT_0676 0.21 -1.4
678,618 - B158DRAFT_0676 0.21 -1.7
678,618 - B158DRAFT_0676 0.21 -0.3
678,618 - B158DRAFT_0676 0.21 -1.5
678,652 + B158DRAFT_0676 0.24 -1.7
678,661 + B158DRAFT_0676 0.24 -1.3
678,692 + B158DRAFT_0676 0.26 -1.8
678,754 + B158DRAFT_0676 0.31 -1.5
678,754 + B158DRAFT_0676 0.31 -0.8
678,754 + B158DRAFT_0676 0.31 +0.9
678,754 + B158DRAFT_0676 0.31 -1.4
678,754 + B158DRAFT_0676 0.31 -1.1
678,762 - B158DRAFT_0676 0.31 -0.6
678,762 - B158DRAFT_0676 0.31 -0.5
678,762 - B158DRAFT_0676 0.31 -1.8
678,762 - B158DRAFT_0676 0.31 -1.5
678,798 + B158DRAFT_0676 0.33 -0.9
678,830 + B158DRAFT_0676 0.36 -2.1
678,838 - B158DRAFT_0676 0.36 -0.5
678,844 - B158DRAFT_0676 0.37 +0.1
678,868 + B158DRAFT_0676 0.38 +0.1
678,876 - B158DRAFT_0676 0.39 -0.3
678,944 - B158DRAFT_0676 0.43 -2.0
678,957 + B158DRAFT_0676 0.44 -1.7
678,965 - B158DRAFT_0676 0.45 -2.3
678,965 - B158DRAFT_0676 0.45 -4.0
678,965 - B158DRAFT_0676 0.45 -1.9
678,967 + B158DRAFT_0676 0.45 -2.7
678,967 + B158DRAFT_0676 0.45 -2.2
678,967 + B158DRAFT_0676 0.45 -3.7
678,967 + B158DRAFT_0676 0.45 -2.2
678,975 - B158DRAFT_0676 0.45 -2.2
678,975 - B158DRAFT_0676 0.45 -3.8
679,031 - B158DRAFT_0676 0.49 -1.1
679,052 + B158DRAFT_0676 0.51 -3.1
679,060 - B158DRAFT_0676 0.51 -3.2
679,078 - B158DRAFT_0676 0.52 -2.6
679,108 + B158DRAFT_0676 0.54 -2.0
679,116 + B158DRAFT_0676 0.55 -3.2
679,116 + B158DRAFT_0676 0.55 -1.9
679,116 + B158DRAFT_0676 0.55 -2.5
679,116 + B158DRAFT_0676 0.55 -1.7
679,124 - B158DRAFT_0676 0.55 -1.7
679,138 + B158DRAFT_0676 0.56 -0.5
679,156 - B158DRAFT_0676 0.57 -2.6
679,226 - B158DRAFT_0676 0.62 -1.7
679,291 + B158DRAFT_0676 0.67 -3.3

Or see this region's nucleotide sequence