Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0297

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0296 and B158DRAFT_0297 are separated by 606 nucleotidesB158DRAFT_0297 and B158DRAFT_0298 are separated by 2 nucleotides B158DRAFT_0296: B158DRAFT_0296 - Uncharacterized protein conserved in bacteria, at 299,840 to 300,304 _0296 B158DRAFT_0297: B158DRAFT_0297 - Uncharacterized conserved protein, at 300,911 to 301,297 _0297 B158DRAFT_0298: B158DRAFT_0298 - Cysteine synthase, at 301,300 to 302,352 _0298 Position (kb) 300 301 302Strain fitness (log2 ratio) -2 -1 0 1at 299.941 kb on - strand, within B158DRAFT_0296at 299.965 kb on + strand, within B158DRAFT_0296at 299.978 kb on + strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.986 kb on - strand, within B158DRAFT_0296at 299.991 kb on - strand, within B158DRAFT_0296at 300.064 kb on - strand, within B158DRAFT_0296at 300.105 kb on - strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.185 kb on + strand, within B158DRAFT_0296at 300.188 kb on - strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.190 kb on + strand, within B158DRAFT_0296at 300.195 kb on + strand, within B158DRAFT_0296at 300.198 kb on - strand, within B158DRAFT_0296at 300.209 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.250 kb on + strand, within B158DRAFT_0296at 300.253 kb on - strand, within B158DRAFT_0296at 300.263 kb on - strandat 300.263 kb on - strandat 300.265 kb on + strandat 301.085 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.156 kb on + strand, within B158DRAFT_0297at 301.218 kb on + strand, within B158DRAFT_0297at 301.343 kb on + strandat 301.472 kb on + strand, within B158DRAFT_0298at 301.529 kb on + strand, within B158DRAFT_0298at 301.532 kb on - strand, within B158DRAFT_0298at 301.537 kb on + strand, within B158DRAFT_0298at 301.603 kb on + strand, within B158DRAFT_0298at 301.611 kb on - strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.681 kb on + strand, within B158DRAFT_0298at 301.688 kb on + strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.689 kb on - strand, within B158DRAFT_0298at 301.722 kb on + strand, within B158DRAFT_0298at 301.740 kb on + strand, within B158DRAFT_0298at 301.748 kb on - strand, within B158DRAFT_0298at 301.753 kb on - strand, within B158DRAFT_0298at 301.753 kb on - strand, within B158DRAFT_0298at 301.758 kb on + strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.758 kb on - strand, within B158DRAFT_0298at 301.773 kb on + strand, within B158DRAFT_0298at 301.801 kb on + strand, within B158DRAFT_0298at 301.813 kb on + strand, within B158DRAFT_0298at 301.813 kb on + strand, within B158DRAFT_0298at 301.819 kb on - strand, within B158DRAFT_0298at 301.825 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.838 kb on + strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.846 kb on - strand, within B158DRAFT_0298at 301.856 kb on - strand, within B158DRAFT_0298at 301.868 kb on + strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.002 kb on - strand, within B158DRAFT_0298at 302.003 kb on - strand, within B158DRAFT_0298at 302.011 kb on + strand, within B158DRAFT_0298at 302.016 kb on + strand, within B158DRAFT_0298at 302.016 kb on + strand, within B158DRAFT_0298at 302.019 kb on - strand, within B158DRAFT_0298at 302.019 kb on - strand, within B158DRAFT_0298at 302.092 kb on + strand, within B158DRAFT_0298at 302.120 kb on - strand, within B158DRAFT_0298at 302.139 kb on - strand, within B158DRAFT_0298at 302.175 kb on + strand, within B158DRAFT_0298at 302.183 kb on - strand, within B158DRAFT_0298

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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299,941 - B158DRAFT_0296 0.22 -0.5
299,965 + B158DRAFT_0296 0.27 +0.1
299,978 + B158DRAFT_0296 0.30 +0.1
299,986 - B158DRAFT_0296 0.31 +0.1
299,986 - B158DRAFT_0296 0.31 -0.1
299,986 - B158DRAFT_0296 0.31 +0.1
299,991 - B158DRAFT_0296 0.32 -0.1
300,064 - B158DRAFT_0296 0.48 -0.5
300,105 - B158DRAFT_0296 0.57 -0.9
300,185 + B158DRAFT_0296 0.74 -0.4
300,185 + B158DRAFT_0296 0.74 -0.1
300,188 - B158DRAFT_0296 0.75 -0.7
300,190 + B158DRAFT_0296 0.75 -0.3
300,190 + B158DRAFT_0296 0.75 +0.8
300,190 + B158DRAFT_0296 0.75 +0.2
300,195 + B158DRAFT_0296 0.76 -0.0
300,198 - B158DRAFT_0296 0.77 +0.2
300,209 + B158DRAFT_0296 0.79 -1.0
300,250 + B158DRAFT_0296 0.88 -0.6
300,250 + B158DRAFT_0296 0.88 +0.0
300,253 - B158DRAFT_0296 0.89 -0.6
300,263 - -0.3
300,263 - -0.2
300,265 + -0.0
301,085 + B158DRAFT_0297 0.45 +0.0
301,156 + B158DRAFT_0297 0.63 +0.6
301,156 + B158DRAFT_0297 0.63 +0.4
301,218 + B158DRAFT_0297 0.79 -0.4
301,343 + -0.3
301,472 + B158DRAFT_0298 0.16 -0.6
301,529 + B158DRAFT_0298 0.22 -1.8
301,532 - B158DRAFT_0298 0.22 +0.5
301,537 + B158DRAFT_0298 0.23 +1.4
301,603 + B158DRAFT_0298 0.29 +0.2
301,611 - B158DRAFT_0298 0.30 +1.1
301,681 + B158DRAFT_0298 0.36 -0.3
301,681 + B158DRAFT_0298 0.36 -0.6
301,681 + B158DRAFT_0298 0.36 -0.7
301,688 + B158DRAFT_0298 0.37 -0.4
301,689 - B158DRAFT_0298 0.37 -0.1
301,689 - B158DRAFT_0298 0.37 -0.1
301,689 - B158DRAFT_0298 0.37 +1.6
301,689 - B158DRAFT_0298 0.37 -0.5
301,689 - B158DRAFT_0298 0.37 -0.7
301,689 - B158DRAFT_0298 0.37 -0.1
301,689 - B158DRAFT_0298 0.37 -0.1
301,722 + B158DRAFT_0298 0.40 -0.1
301,740 + B158DRAFT_0298 0.42 -0.6
301,748 - B158DRAFT_0298 0.43 -0.5
301,753 - B158DRAFT_0298 0.43 -0.1
301,753 - B158DRAFT_0298 0.43 -0.2
301,758 + B158DRAFT_0298 0.43 -0.5
301,758 - B158DRAFT_0298 0.43 +0.4
301,758 - B158DRAFT_0298 0.43 -0.5
301,758 - B158DRAFT_0298 0.43 -0.8
301,758 - B158DRAFT_0298 0.43 +0.1
301,773 + B158DRAFT_0298 0.45 +0.2
301,801 + B158DRAFT_0298 0.48 +0.3
301,813 + B158DRAFT_0298 0.49 +0.1
301,813 + B158DRAFT_0298 0.49 -0.3
301,819 - B158DRAFT_0298 0.49 +0.2
301,825 + B158DRAFT_0298 0.50 -0.9
301,838 + B158DRAFT_0298 0.51 -1.4
301,838 + B158DRAFT_0298 0.51 +0.1
301,838 + B158DRAFT_0298 0.51 -0.0
301,838 + B158DRAFT_0298 0.51 -0.5
301,838 + B158DRAFT_0298 0.51 -0.1
301,838 + B158DRAFT_0298 0.51 +0.2
301,838 + B158DRAFT_0298 0.51 -1.6
301,846 - B158DRAFT_0298 0.52 -0.1
301,846 - B158DRAFT_0298 0.52 -0.2
301,846 - B158DRAFT_0298 0.52 -0.0
301,846 - B158DRAFT_0298 0.52 +0.3
301,846 - B158DRAFT_0298 0.52 -0.3
301,846 - B158DRAFT_0298 0.52 -0.1
301,856 - B158DRAFT_0298 0.53 -0.1
301,868 + B158DRAFT_0298 0.54 -0.0
302,002 - B158DRAFT_0298 0.67 +0.4
302,002 - B158DRAFT_0298 0.67 +0.5
302,002 - B158DRAFT_0298 0.67 -0.2
302,003 - B158DRAFT_0298 0.67 -0.4
302,011 + B158DRAFT_0298 0.68 +0.8
302,016 + B158DRAFT_0298 0.68 +0.2
302,016 + B158DRAFT_0298 0.68 -0.0
302,019 - B158DRAFT_0298 0.68 +0.4
302,019 - B158DRAFT_0298 0.68 -0.3
302,092 + B158DRAFT_0298 0.75 -0.6
302,120 - B158DRAFT_0298 0.78 +0.1
302,139 - B158DRAFT_0298 0.80 +0.3
302,175 + B158DRAFT_0298 0.83 -0.1
302,183 - B158DRAFT_0298 0.84 -0.7

Or see this region's nucleotide sequence