Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0240 and B158DRAFT_0242 are separated by 398 nucleotides B158DRAFT_0242 and B158DRAFT_0243 are separated by 137 nucleotides B158DRAFT_0243 and B158DRAFT_0244 are separated by 3 nucleotides
B158DRAFT_0240: B158DRAFT_0240 - Lactate dehydrogenase and related dehydrogenases, at 249,489 to 250,442
_0240
B158DRAFT_0242: B158DRAFT_0242 - hypothetical protein, at 250,841 to 251,404
_0242
B158DRAFT_0243: B158DRAFT_0243 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 251,542 to 252,207
_0243
B158DRAFT_0244: B158DRAFT_0244 - tyrosine recombinase XerC subunit, at 252,211 to 253,110
_0244
Position (kb) 250
251
252 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 249.961 kb on + strand, within B158DRAFT_0240 at 249.968 kb on - strand, within B158DRAFT_0240 at 249.976 kb on + strand, within B158DRAFT_0240 at 250.025 kb on - strand, within B158DRAFT_0240 at 250.080 kb on + strand, within B158DRAFT_0240 at 250.080 kb on + strand, within B158DRAFT_0240 at 250.088 kb on - strand, within B158DRAFT_0240 at 250.090 kb on + strand, within B158DRAFT_0240 at 250.092 kb on + strand, within B158DRAFT_0240 at 250.100 kb on - strand, within B158DRAFT_0240 at 250.101 kb on - strand, within B158DRAFT_0240 at 250.230 kb on + strand, within B158DRAFT_0240 at 250.244 kb on - strand, within B158DRAFT_0240 at 250.304 kb on + strand, within B158DRAFT_0240 at 250.304 kb on + strand, within B158DRAFT_0240 at 250.304 kb on + strand, within B158DRAFT_0240 at 250.304 kb on + strand, within B158DRAFT_0240 at 250.340 kb on + strand, within B158DRAFT_0240 at 250.346 kb on - strand, within B158DRAFT_0240 at 250.354 kb on - strand at 250.368 kb on + strand at 250.406 kb on + strand at 250.421 kb on - strand at 250.461 kb on - strand at 250.514 kb on + strand at 250.896 kb on + strand at 250.896 kb on + strand at 250.896 kb on + strand at 250.904 kb on - strand, within B158DRAFT_0242 at 250.904 kb on - strand, within B158DRAFT_0242 at 250.925 kb on - strand, within B158DRAFT_0242 at 250.982 kb on - strand, within B158DRAFT_0242 at 251.053 kb on - strand, within B158DRAFT_0242 at 251.102 kb on + strand, within B158DRAFT_0242 at 251.110 kb on - strand, within B158DRAFT_0242 at 251.110 kb on - strand, within B158DRAFT_0242 at 251.110 kb on - strand, within B158DRAFT_0242 at 251.110 kb on - strand, within B158DRAFT_0242 at 251.110 kb on - strand, within B158DRAFT_0242 at 251.120 kb on - strand, within B158DRAFT_0242 at 251.362 kb on + strand at 251.377 kb on - strand at 251.465 kb on - strand at 251.465 kb on - strand at 251.888 kb on + strand, within B158DRAFT_0243 at 251.888 kb on + strand, within B158DRAFT_0243 at 251.888 kb on + strand, within B158DRAFT_0243 at 251.888 kb on + strand, within B158DRAFT_0243 at 251.888 kb on + strand, within B158DRAFT_0243 at 251.909 kb on + strand, within B158DRAFT_0243 at 251.909 kb on + strand, within B158DRAFT_0243 at 252.105 kb on - strand, within B158DRAFT_0243 at 252.325 kb on + strand, within B158DRAFT_0244 at 252.335 kb on + strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244 at 252.379 kb on - strand, within B158DRAFT_0244
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 249,961 + B158DRAFT_0240 0.49 -0.2 249,968 - B158DRAFT_0240 0.50 +0.0 249,976 + B158DRAFT_0240 0.51 -0.2 250,025 - B158DRAFT_0240 0.56 +0.6 250,080 + B158DRAFT_0240 0.62 +0.3 250,080 + B158DRAFT_0240 0.62 -0.3 250,088 - B158DRAFT_0240 0.63 -0.4 250,090 + B158DRAFT_0240 0.63 -0.5 250,092 + B158DRAFT_0240 0.63 +0.4 250,100 - B158DRAFT_0240 0.64 -1.1 250,101 - B158DRAFT_0240 0.64 -0.1 250,230 + B158DRAFT_0240 0.78 +0.4 250,244 - B158DRAFT_0240 0.79 +0.1 250,304 + B158DRAFT_0240 0.85 -0.5 250,304 + B158DRAFT_0240 0.85 -0.5 250,304 + B158DRAFT_0240 0.85 +0.6 250,304 + B158DRAFT_0240 0.85 -0.1 250,340 + B158DRAFT_0240 0.89 -0.2 250,346 - B158DRAFT_0240 0.90 +0.5 250,354 - -0.2 250,368 + -0.3 250,406 + -0.4 250,421 - -0.9 250,461 - -0.6 250,514 + -0.3 250,896 + -0.7 250,896 + -0.2 250,896 + +0.7 250,904 - B158DRAFT_0242 0.11 -0.1 250,904 - B158DRAFT_0242 0.11 +0.7 250,925 - B158DRAFT_0242 0.15 -0.8 250,982 - B158DRAFT_0242 0.25 -2.4 251,053 - B158DRAFT_0242 0.38 -1.3 251,102 + B158DRAFT_0242 0.46 -0.4 251,110 - B158DRAFT_0242 0.48 -1.5 251,110 - B158DRAFT_0242 0.48 -0.1 251,110 - B158DRAFT_0242 0.48 -0.9 251,110 - B158DRAFT_0242 0.48 -0.2 251,110 - B158DRAFT_0242 0.48 +0.5 251,120 - B158DRAFT_0242 0.49 -0.1 251,362 + +0.1 251,377 - +0.4 251,465 - +0.3 251,465 - -0.1 251,888 + B158DRAFT_0243 0.52 -1.3 251,888 + B158DRAFT_0243 0.52 -1.9 251,888 + B158DRAFT_0243 0.52 -3.4 251,888 + B158DRAFT_0243 0.52 -1.4 251,888 + B158DRAFT_0243 0.52 -1.2 251,909 + B158DRAFT_0243 0.55 -2.3 251,909 + B158DRAFT_0243 0.55 -2.6 252,105 - B158DRAFT_0243 0.85 -2.0 252,325 + B158DRAFT_0244 0.13 -4.0 252,335 + B158DRAFT_0244 0.14 -2.1 252,379 - B158DRAFT_0244 0.19 +0.2 252,379 - B158DRAFT_0244 0.19 -1.9
Or see this region's nucleotide sequence