Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0121

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0120 and B158DRAFT_0121 overlap by 1 nucleotidesB158DRAFT_0121 and B158DRAFT_0122 are separated by 17 nucleotides B158DRAFT_0120: B158DRAFT_0120 - NADH dehydrogenase subunit H (EC 1.6.5.3), at 116,691 to 117,731 _0120 B158DRAFT_0121: B158DRAFT_0121 - NADH-quinone oxidoreductase, chain G, at 117,731 to 119,974 _0121 B158DRAFT_0122: B158DRAFT_0122 - NADH-quinone oxidoreductase, F subunit, at 119,992 to 121,287 _0122 Position (kb) 117 118 119 120Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 116.745 kb on + strandat 116.786 kb on - strandat 116.801 kb on - strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.832 kb on + strand, within B158DRAFT_0120at 116.892 kb on - strand, within B158DRAFT_0120at 116.937 kb on - strand, within B158DRAFT_0120at 116.944 kb on + strand, within B158DRAFT_0120at 116.949 kb on - strand, within B158DRAFT_0120at 117.011 kb on - strand, within B158DRAFT_0120at 117.024 kb on - strand, within B158DRAFT_0120at 117.026 kb on + strand, within B158DRAFT_0120at 117.034 kb on - strand, within B158DRAFT_0120at 117.082 kb on + strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.090 kb on - strand, within B158DRAFT_0120at 117.092 kb on + strand, within B158DRAFT_0120at 117.112 kb on + strand, within B158DRAFT_0120at 117.189 kb on + strand, within B158DRAFT_0120at 117.258 kb on + strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.259 kb on - strand, within B158DRAFT_0120at 117.362 kb on - strand, within B158DRAFT_0120at 117.383 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.385 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.400 kb on + strand, within B158DRAFT_0120at 117.408 kb on - strand, within B158DRAFT_0120at 117.435 kb on + strand, within B158DRAFT_0120at 117.549 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.556 kb on + strand, within B158DRAFT_0120at 117.564 kb on - strand, within B158DRAFT_0120at 117.571 kb on - strand, within B158DRAFT_0120at 117.574 kb on + strand, within B158DRAFT_0120at 117.581 kb on + strand, within B158DRAFT_0120at 117.588 kb on - strand, within B158DRAFT_0120at 117.646 kb on + strandat 117.646 kb on + strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.654 kb on - strandat 117.766 kb on + strandat 117.766 kb on + strandat 117.776 kb on + strandat 117.784 kb on - strandat 117.832 kb on + strandat 117.840 kb on - strandat 117.840 kb on - strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.865 kb on + strandat 117.870 kb on + strandat 117.873 kb on - strandat 117.923 kb on - strandat 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.041 kb on + strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.049 kb on - strand, within B158DRAFT_0121at 118.111 kb on + strand, within B158DRAFT_0121at 118.160 kb on + strand, within B158DRAFT_0121at 118.168 kb on - strand, within B158DRAFT_0121at 118.177 kb on + strand, within B158DRAFT_0121at 118.195 kb on - strand, within B158DRAFT_0121at 118.195 kb on - strand, within B158DRAFT_0121at 118.224 kb on + strand, within B158DRAFT_0121at 118.224 kb on + strand, within B158DRAFT_0121at 118.231 kb on - strand, within B158DRAFT_0121at 118.232 kb on - strand, within B158DRAFT_0121at 118.232 kb on - strand, within B158DRAFT_0121at 118.312 kb on - strand, within B158DRAFT_0121at 118.336 kb on + strand, within B158DRAFT_0121at 118.423 kb on - strand, within B158DRAFT_0121at 118.430 kb on + strand, within B158DRAFT_0121at 118.430 kb on + strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.438 kb on - strand, within B158DRAFT_0121at 118.535 kb on + strand, within B158DRAFT_0121at 118.566 kb on + strand, within B158DRAFT_0121at 118.599 kb on + strand, within B158DRAFT_0121at 118.649 kb on - strand, within B158DRAFT_0121at 118.649 kb on - strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.678 kb on + strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121at 118.686 kb on - strand, within B158DRAFT_0121at 118.813 kb on - strand, within B158DRAFT_0121at 118.813 kb on - strand, within B158DRAFT_0121at 118.827 kb on + strand, within B158DRAFT_0121at 118.862 kb on - strand, within B158DRAFT_0121at 118.870 kb on + strand, within B158DRAFT_0121at 118.878 kb on - strand, within B158DRAFT_0121at 118.878 kb on - strand, within B158DRAFT_0121at 118.885 kb on - strand, within B158DRAFT_0121at 118.909 kb on + strand, within B158DRAFT_0121at 118.911 kb on + strand, within B158DRAFT_0121at 118.939 kb on + strand, within B158DRAFT_0121at 118.947 kb on - strand, within B158DRAFT_0121at 119.035 kb on - strand, within B158DRAFT_0121at 119.035 kb on - strand, within B158DRAFT_0121at 119.076 kb on + strand, within B158DRAFT_0121at 119.084 kb on - strand, within B158DRAFT_0121at 119.269 kb on + strand, within B158DRAFT_0121at 119.269 kb on + strand, within B158DRAFT_0121at 119.277 kb on - strand, within B158DRAFT_0121at 119.279 kb on - strand, within B158DRAFT_0121at 119.292 kb on - strand, within B158DRAFT_0121at 119.308 kb on - strand, within B158DRAFT_0121at 119.316 kb on + strand, within B158DRAFT_0121at 119.316 kb on + strand, within B158DRAFT_0121at 119.324 kb on - strand, within B158DRAFT_0121at 119.328 kb on + strand, within B158DRAFT_0121at 119.336 kb on - strand, within B158DRAFT_0121at 119.352 kb on - strand, within B158DRAFT_0121at 119.369 kb on + strand, within B158DRAFT_0121at 119.370 kb on - strand, within B158DRAFT_0121at 119.377 kb on - strand, within B158DRAFT_0121at 119.475 kb on + strand, within B158DRAFT_0121at 119.538 kb on - strand, within B158DRAFT_0121at 119.567 kb on + strand, within B158DRAFT_0121at 119.568 kb on + strand, within B158DRAFT_0121at 119.576 kb on - strand, within B158DRAFT_0121at 119.668 kb on + strand, within B158DRAFT_0121at 119.687 kb on - strand, within B158DRAFT_0121at 119.694 kb on + strand, within B158DRAFT_0121at 119.723 kb on + strand, within B158DRAFT_0121at 119.731 kb on - strand, within B158DRAFT_0121at 119.731 kb on - strand, within B158DRAFT_0121at 119.814 kb on + strandat 119.920 kb on + strandat 119.928 kb on - strandat 119.929 kb on - strandat 120.009 kb on + strandat 120.017 kb on + strandat 120.115 kb on - strandat 120.115 kb on - strandat 120.178 kb on + strand, within B158DRAFT_0122at 120.180 kb on + strand, within B158DRAFT_0122at 120.184 kb on + strand, within B158DRAFT_0122at 120.226 kb on + strand, within B158DRAFT_0122at 120.226 kb on + strand, within B158DRAFT_0122at 120.226 kb on + strand, within B158DRAFT_0122at 120.228 kb on - strand, within B158DRAFT_0122at 120.228 kb on - strand, within B158DRAFT_0122at 120.255 kb on + strand, within B158DRAFT_0122at 120.349 kb on - strand, within B158DRAFT_0122at 120.354 kb on - strand, within B158DRAFT_0122at 120.377 kb on + strand, within B158DRAFT_0122at 120.418 kb on + strand, within B158DRAFT_0122at 120.425 kb on + strand, within B158DRAFT_0122at 120.426 kb on - strand, within B158DRAFT_0122at 120.431 kb on - strand, within B158DRAFT_0122at 120.435 kb on - strand, within B158DRAFT_0122at 120.449 kb on + strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.484 kb on - strand, within B158DRAFT_0122at 120.506 kb on + strand, within B158DRAFT_0122at 120.506 kb on + strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.645 kb on - strand, within B158DRAFT_0122at 120.697 kb on - strand, within B158DRAFT_0122at 120.737 kb on + strand, within B158DRAFT_0122at 120.819 kb on + strand, within B158DRAFT_0122at 120.826 kb on + strand, within B158DRAFT_0122at 120.826 kb on - strand, within B158DRAFT_0122at 120.891 kb on + strand, within B158DRAFT_0122at 120.933 kb on + strand, within B158DRAFT_0122

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
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116,745 + -1.6
116,786 - -3.1
116,801 - B158DRAFT_0120 0.11 -2.3
116,832 + B158DRAFT_0120 0.14 -3.5
116,832 + B158DRAFT_0120 0.14 -1.8
116,892 - B158DRAFT_0120 0.19 -4.0
116,937 - B158DRAFT_0120 0.24 -2.9
116,944 + B158DRAFT_0120 0.24 -4.5
116,949 - B158DRAFT_0120 0.25 -3.4
117,011 - B158DRAFT_0120 0.31 -3.8
117,024 - B158DRAFT_0120 0.32 -3.2
117,026 + B158DRAFT_0120 0.32 -2.1
117,034 - B158DRAFT_0120 0.33 -2.6
117,082 + B158DRAFT_0120 0.38 -3.4
117,090 - B158DRAFT_0120 0.38 -2.0
117,090 - B158DRAFT_0120 0.38 -3.2
117,092 + B158DRAFT_0120 0.39 -3.3
117,112 + B158DRAFT_0120 0.40 -2.7
117,189 + B158DRAFT_0120 0.48 -3.6
117,258 + B158DRAFT_0120 0.54 -3.0
117,259 - B158DRAFT_0120 0.55 -4.1
117,259 - B158DRAFT_0120 0.55 -1.9
117,259 - B158DRAFT_0120 0.55 -3.1
117,362 - B158DRAFT_0120 0.64 -2.2
117,383 + B158DRAFT_0120 0.66 -3.8
117,385 + B158DRAFT_0120 0.67 -3.7
117,385 + B158DRAFT_0120 0.67 -3.2
117,400 + B158DRAFT_0120 0.68 -3.8
117,400 + B158DRAFT_0120 0.68 -2.9
117,408 - B158DRAFT_0120 0.69 -2.6
117,435 + B158DRAFT_0120 0.71 -3.2
117,549 + B158DRAFT_0120 0.82 -4.4
117,556 + B158DRAFT_0120 0.83 -3.1
117,556 + B158DRAFT_0120 0.83 -2.9
117,556 + B158DRAFT_0120 0.83 -2.8
117,564 - B158DRAFT_0120 0.84 -2.8
117,571 - B158DRAFT_0120 0.85 -2.9
117,574 + B158DRAFT_0120 0.85 -3.8
117,581 + B158DRAFT_0120 0.85 -4.5
117,588 - B158DRAFT_0120 0.86 -2.2
117,646 + -0.8
117,646 + -2.2
117,654 - -2.3
117,654 - -2.7
117,654 - -2.6
117,654 - -1.5
117,654 - -2.9
117,766 + -3.4
117,766 + -3.0
117,776 + -2.2
117,784 - -0.7
117,832 + -2.7
117,840 - -2.8
117,840 - -2.4
117,865 + -1.7
117,865 + -3.3
117,865 + -1.8
117,865 + -3.5
117,870 + -3.5
117,873 - -1.8
117,923 - -1.4
118,041 + B158DRAFT_0121 0.14 -3.6
118,041 + B158DRAFT_0121 0.14 -3.3
118,041 + B158DRAFT_0121 0.14 -3.3
118,041 + B158DRAFT_0121 0.14 -3.0
118,041 + B158DRAFT_0121 0.14 -3.4
118,041 + B158DRAFT_0121 0.14 -2.6
118,041 + B158DRAFT_0121 0.14 -3.2
118,041 + B158DRAFT_0121 0.14 -3.7
118,041 + B158DRAFT_0121 0.14 -3.1
118,041 + B158DRAFT_0121 0.14 -0.8
118,041 + B158DRAFT_0121 0.14 -3.9
118,049 - B158DRAFT_0121 0.14 -1.1
118,049 - B158DRAFT_0121 0.14 -1.9
118,049 - B158DRAFT_0121 0.14 -1.8
118,049 - B158DRAFT_0121 0.14 -1.3
118,049 - B158DRAFT_0121 0.14 -2.5
118,049 - B158DRAFT_0121 0.14 -1.9
118,049 - B158DRAFT_0121 0.14 -1.3
118,049 - B158DRAFT_0121 0.14 +0.5
118,049 - B158DRAFT_0121 0.14 -1.8
118,049 - B158DRAFT_0121 0.14 -2.4
118,111 + B158DRAFT_0121 0.17 -2.8
118,160 + B158DRAFT_0121 0.19 -2.3
118,168 - B158DRAFT_0121 0.19 -3.2
118,177 + B158DRAFT_0121 0.20 -4.9
118,195 - B158DRAFT_0121 0.21 -1.1
118,195 - B158DRAFT_0121 0.21 -2.3
118,224 + B158DRAFT_0121 0.22 -4.6
118,224 + B158DRAFT_0121 0.22 -3.1
118,231 - B158DRAFT_0121 0.22 -3.0
118,232 - B158DRAFT_0121 0.22 +0.1
118,232 - B158DRAFT_0121 0.22 -2.1
118,312 - B158DRAFT_0121 0.26 -2.2
118,336 + B158DRAFT_0121 0.27 -3.1
118,423 - B158DRAFT_0121 0.31 -1.5
118,430 + B158DRAFT_0121 0.31 -3.2
118,430 + B158DRAFT_0121 0.31 -1.6
118,438 - B158DRAFT_0121 0.32 -1.7
118,438 - B158DRAFT_0121 0.32 -1.3
118,438 - B158DRAFT_0121 0.32 -1.0
118,535 + B158DRAFT_0121 0.36 -4.2
118,566 + B158DRAFT_0121 0.37 -3.2
118,599 + B158DRAFT_0121 0.39 -2.5
118,649 - B158DRAFT_0121 0.41 -1.4
118,649 - B158DRAFT_0121 0.41 -1.8
118,678 + B158DRAFT_0121 0.42 -2.7
118,678 + B158DRAFT_0121 0.42 -3.2
118,678 + B158DRAFT_0121 0.42 -3.6
118,678 + B158DRAFT_0121 0.42 -1.8
118,678 + B158DRAFT_0121 0.42 -4.0
118,678 + B158DRAFT_0121 0.42 -2.8
118,678 + B158DRAFT_0121 0.42 -3.2
118,686 - B158DRAFT_0121 0.43 -2.0
118,686 - B158DRAFT_0121 0.43 -1.4
118,686 - B158DRAFT_0121 0.43 -1.9
118,813 - B158DRAFT_0121 0.48 -0.5
118,813 - B158DRAFT_0121 0.48 -1.6
118,827 + B158DRAFT_0121 0.49 -3.7
118,862 - B158DRAFT_0121 0.50 -1.9
118,870 + B158DRAFT_0121 0.51 -2.8
118,878 - B158DRAFT_0121 0.51 -2.6
118,878 - B158DRAFT_0121 0.51 -1.8
118,885 - B158DRAFT_0121 0.51 -2.2
118,909 + B158DRAFT_0121 0.52 -2.4
118,911 + B158DRAFT_0121 0.53 -2.6
118,939 + B158DRAFT_0121 0.54 -3.2
118,947 - B158DRAFT_0121 0.54 -1.2
119,035 - B158DRAFT_0121 0.58 -1.7
119,035 - B158DRAFT_0121 0.58 -2.4
119,076 + B158DRAFT_0121 0.60 -3.4
119,084 - B158DRAFT_0121 0.60 -2.2
119,269 + B158DRAFT_0121 0.69 -2.7
119,269 + B158DRAFT_0121 0.69 -3.0
119,277 - B158DRAFT_0121 0.69 -0.0
119,279 - B158DRAFT_0121 0.69 -1.1
119,292 - B158DRAFT_0121 0.70 -0.6
119,308 - B158DRAFT_0121 0.70 -1.0
119,316 + B158DRAFT_0121 0.71 -2.0
119,316 + B158DRAFT_0121 0.71 -3.5
119,324 - B158DRAFT_0121 0.71 -0.7
119,328 + B158DRAFT_0121 0.71 -2.8
119,336 - B158DRAFT_0121 0.72 -2.4
119,352 - B158DRAFT_0121 0.72 -0.8
119,369 + B158DRAFT_0121 0.73 -3.2
119,370 - B158DRAFT_0121 0.73 -1.7
119,377 - B158DRAFT_0121 0.73 -1.1
119,475 + B158DRAFT_0121 0.78 -2.3
119,538 - B158DRAFT_0121 0.81 -1.4
119,567 + B158DRAFT_0121 0.82 -4.4
119,568 + B158DRAFT_0121 0.82 -2.8
119,576 - B158DRAFT_0121 0.82 -1.2
119,668 + B158DRAFT_0121 0.86 -3.2
119,687 - B158DRAFT_0121 0.87 -2.3
119,694 + B158DRAFT_0121 0.87 -2.4
119,723 + B158DRAFT_0121 0.89 -3.5
119,731 - B158DRAFT_0121 0.89 -2.0
119,731 - B158DRAFT_0121 0.89 -1.0
119,814 + -4.8
119,920 + -2.7
119,928 - -1.4
119,929 - -0.2
120,009 + -3.8
120,017 + -2.1
120,115 - -0.4
120,115 - +0.6
120,178 + B158DRAFT_0122 0.14 -1.0
120,180 + B158DRAFT_0122 0.15 -3.8
120,184 + B158DRAFT_0122 0.15 -3.2
120,226 + B158DRAFT_0122 0.18 -2.9
120,226 + B158DRAFT_0122 0.18 -2.2
120,226 + B158DRAFT_0122 0.18 -1.6
120,228 - B158DRAFT_0122 0.18 +0.8
120,228 - B158DRAFT_0122 0.18 -0.2
120,255 + B158DRAFT_0122 0.20 -2.8
120,349 - B158DRAFT_0122 0.28 +0.2
120,354 - B158DRAFT_0122 0.28 +0.9
120,377 + B158DRAFT_0122 0.30 -2.6
120,418 + B158DRAFT_0122 0.33 -3.1
120,425 + B158DRAFT_0122 0.33 -2.4
120,426 - B158DRAFT_0122 0.33 +0.3
120,431 - B158DRAFT_0122 0.34 +0.1
120,435 - B158DRAFT_0122 0.34 +0.2
120,449 + B158DRAFT_0122 0.35 -4.4
120,457 - B158DRAFT_0122 0.36 +0.0
120,457 - B158DRAFT_0122 0.36 +0.6
120,457 - B158DRAFT_0122 0.36 +0.3
120,457 - B158DRAFT_0122 0.36 +0.4
120,484 - B158DRAFT_0122 0.38 +0.8
120,506 + B158DRAFT_0122 0.40 -0.8
120,506 + B158DRAFT_0122 0.40 -3.1
120,514 - B158DRAFT_0122 0.40 +0.6
120,514 - B158DRAFT_0122 0.40 +0.3
120,514 - B158DRAFT_0122 0.40 +0.8
120,645 - B158DRAFT_0122 0.50 +0.2
120,697 - B158DRAFT_0122 0.54 +0.0
120,737 + B158DRAFT_0122 0.57 -3.0
120,819 + B158DRAFT_0122 0.64 -3.0
120,826 + B158DRAFT_0122 0.64 -2.8
120,826 - B158DRAFT_0122 0.64 +0.5
120,891 + B158DRAFT_0122 0.69 -2.8
120,933 + B158DRAFT_0122 0.73 -3.2

Or see this region's nucleotide sequence