Experiment: m.b. D-Cycloserine 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0115 and B158DRAFT_0116 are separated by 67 nucleotides B158DRAFT_0116 and B158DRAFT_0117 overlap by 1 nucleotides B158DRAFT_0117 and B158DRAFT_0118 overlap by 4 nucleotides
B158DRAFT_0115: B158DRAFT_0115 - NADH dehydrogenase subunit M (EC 1.6.5.3), at 111,578 to 113,095
_0115
B158DRAFT_0116: B158DRAFT_0116 - NADH dehydrogenase subunit L (EC 1.6.5.3), at 113,163 to 115,181
_0116
B158DRAFT_0117: B158DRAFT_0117 - NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K), at 115,181 to 115,483
_0117
B158DRAFT_0118: B158DRAFT_0118 - NADH dehydrogenase subunit J (EC 1.6.5.3), at 115,480 to 116,160
_0118
Position (kb)
113
114
115
116 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 112.178 kb on - strand, within B158DRAFT_0115 at 112.212 kb on + strand, within B158DRAFT_0115 at 112.250 kb on + strand, within B158DRAFT_0115 at 112.250 kb on + strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.263 kb on - strand, within B158DRAFT_0115 at 112.354 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.403 kb on + strand, within B158DRAFT_0115 at 112.411 kb on - strand, within B158DRAFT_0115 at 112.487 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.536 kb on + strand, within B158DRAFT_0115 at 112.544 kb on - strand, within B158DRAFT_0115 at 112.623 kb on + strand, within B158DRAFT_0115 at 112.718 kb on - strand, within B158DRAFT_0115 at 112.787 kb on + strand, within B158DRAFT_0115 at 112.795 kb on - strand, within B158DRAFT_0115 at 112.795 kb on - strand, within B158DRAFT_0115 at 112.795 kb on - strand, within B158DRAFT_0115 at 112.795 kb on - strand, within B158DRAFT_0115 at 112.814 kb on + strand, within B158DRAFT_0115 at 112.814 kb on + strand, within B158DRAFT_0115 at 112.979 kb on - strand at 113.097 kb on + strand at 113.097 kb on + strand at 113.097 kb on + strand at 113.097 kb on + strand at 113.099 kb on + strand at 113.105 kb on - strand at 113.105 kb on - strand at 113.105 kb on - strand at 113.107 kb on - strand at 113.113 kb on - strand at 113.174 kb on + strand at 113.184 kb on + strand at 113.192 kb on - strand at 113.192 kb on - strand at 113.209 kb on + strand at 113.217 kb on - strand at 113.219 kb on + strand at 113.219 kb on + strand at 113.227 kb on - strand at 113.228 kb on - strand at 113.229 kb on - strand at 113.366 kb on - strand, within B158DRAFT_0116 at 113.367 kb on - strand, within B158DRAFT_0116 at 113.520 kb on + strand, within B158DRAFT_0116 at 113.520 kb on + strand, within B158DRAFT_0116 at 113.528 kb on - strand, within B158DRAFT_0116 at 113.622 kb on - strand, within B158DRAFT_0116 at 113.679 kb on + strand, within B158DRAFT_0116 at 113.709 kb on + strand, within B158DRAFT_0116 at 113.784 kb on - strand, within B158DRAFT_0116 at 113.802 kb on + strand, within B158DRAFT_0116 at 113.808 kb on - strand, within B158DRAFT_0116 at 113.810 kb on - strand, within B158DRAFT_0116 at 113.824 kb on - strand, within B158DRAFT_0116 at 113.842 kb on - strand, within B158DRAFT_0116 at 113.902 kb on + strand, within B158DRAFT_0116 at 113.905 kb on - strand, within B158DRAFT_0116 at 113.905 kb on - strand, within B158DRAFT_0116 at 113.912 kb on - strand, within B158DRAFT_0116 at 113.912 kb on - strand, within B158DRAFT_0116 at 113.974 kb on + strand, within B158DRAFT_0116 at 113.975 kb on - strand, within B158DRAFT_0116 at 113.980 kb on + strand, within B158DRAFT_0116 at 113.982 kb on + strand, within B158DRAFT_0116 at 113.982 kb on - strand, within B158DRAFT_0116 at 113.990 kb on - strand, within B158DRAFT_0116 at 114.032 kb on + strand, within B158DRAFT_0116 at 114.057 kb on + strand, within B158DRAFT_0116 at 114.065 kb on - strand, within B158DRAFT_0116 at 114.114 kb on - strand, within B158DRAFT_0116 at 114.186 kb on + strand, within B158DRAFT_0116 at 114.249 kb on + strand, within B158DRAFT_0116 at 114.280 kb on + strand, within B158DRAFT_0116 at 114.333 kb on + strand, within B158DRAFT_0116 at 114.336 kb on - strand, within B158DRAFT_0116 at 114.403 kb on + strand, within B158DRAFT_0116 at 114.411 kb on - strand, within B158DRAFT_0116 at 114.452 kb on - strand, within B158DRAFT_0116 at 114.467 kb on - strand, within B158DRAFT_0116 at 114.476 kb on - strand, within B158DRAFT_0116 at 114.496 kb on - strand, within B158DRAFT_0116 at 114.498 kb on + strand, within B158DRAFT_0116 at 114.501 kb on - strand, within B158DRAFT_0116 at 114.525 kb on + strand, within B158DRAFT_0116 at 114.557 kb on + strand, within B158DRAFT_0116 at 114.726 kb on + strand, within B158DRAFT_0116 at 114.726 kb on + strand, within B158DRAFT_0116 at 114.734 kb on - strand, within B158DRAFT_0116 at 114.759 kb on - strand, within B158DRAFT_0116 at 114.786 kb on + strand, within B158DRAFT_0116 at 114.813 kb on + strand, within B158DRAFT_0116 at 114.859 kb on - strand, within B158DRAFT_0116 at 114.870 kb on + strand, within B158DRAFT_0116 at 114.878 kb on + strand, within B158DRAFT_0116 at 114.878 kb on + strand, within B158DRAFT_0116 at 114.886 kb on - strand, within B158DRAFT_0116 at 114.886 kb on - strand, within B158DRAFT_0116 at 114.910 kb on - strand, within B158DRAFT_0116 at 115.021 kb on + strand at 115.021 kb on + strand at 115.021 kb on + strand at 115.021 kb on + strand at 115.029 kb on - strand at 115.031 kb on + strand at 115.043 kb on + strand at 115.063 kb on - strand at 115.069 kb on + strand at 115.109 kb on - strand at 115.187 kb on - strand at 115.202 kb on - strand at 115.212 kb on - strand, within B158DRAFT_0117 at 115.212 kb on - strand, within B158DRAFT_0117 at 115.212 kb on - strand, within B158DRAFT_0117 at 115.232 kb on + strand, within B158DRAFT_0117 at 115.258 kb on - strand, within B158DRAFT_0117 at 115.258 kb on - strand, within B158DRAFT_0117 at 115.270 kb on + strand, within B158DRAFT_0117 at 115.375 kb on + strand, within B158DRAFT_0117 at 115.383 kb on - strand, within B158DRAFT_0117 at 115.386 kb on - strand, within B158DRAFT_0117 at 115.432 kb on + strand, within B158DRAFT_0117 at 115.489 kb on - strand at 115.501 kb on - strand at 115.541 kb on + strand at 115.560 kb on + strand, within B158DRAFT_0118 at 115.610 kb on + strand, within B158DRAFT_0118 at 115.615 kb on + strand, within B158DRAFT_0118 at 115.615 kb on + strand, within B158DRAFT_0118 at 115.623 kb on - strand, within B158DRAFT_0118 at 115.630 kb on + strand, within B158DRAFT_0118 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.736 kb on + strand, within B158DRAFT_0118 at 115.749 kb on + strand, within B158DRAFT_0118 at 115.757 kb on + strand, within B158DRAFT_0118 at 115.758 kb on - strand, within B158DRAFT_0118 at 115.768 kb on + strand, within B158DRAFT_0118 at 115.824 kb on - strand, within B158DRAFT_0118 at 115.889 kb on - strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.905 kb on + strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.913 kb on - strand, within B158DRAFT_0118 at 115.915 kb on + strand, within B158DRAFT_0118 at 115.954 kb on - strand, within B158DRAFT_0118 at 115.973 kb on + strand, within B158DRAFT_0118 at 115.978 kb on + strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 115.981 kb on - strand, within B158DRAFT_0118 at 116.031 kb on - strand, within B158DRAFT_0118 at 116.059 kb on + strand, within B158DRAFT_0118 at 116.067 kb on - strand, within B158DRAFT_0118 at 116.090 kb on + strand, within B158DRAFT_0118 at 116.098 kb on + strand at 116.119 kb on - strand at 116.155 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml remove 112,178 - B158DRAFT_0115 0.40 -1.0 112,212 + B158DRAFT_0115 0.42 -2.0 112,250 + B158DRAFT_0115 0.44 -3.0 112,250 + B158DRAFT_0115 0.44 -2.8 112,263 - B158DRAFT_0115 0.45 -0.8 112,263 - B158DRAFT_0115 0.45 -1.6 112,263 - B158DRAFT_0115 0.45 -1.3 112,354 + B158DRAFT_0115 0.51 -1.6 112,403 + B158DRAFT_0115 0.54 -2.0 112,403 + B158DRAFT_0115 0.54 -3.0 112,403 + B158DRAFT_0115 0.54 -3.9 112,411 - B158DRAFT_0115 0.55 -0.3 112,487 + B158DRAFT_0115 0.60 -3.3 112,536 + B158DRAFT_0115 0.63 -1.8 112,536 + B158DRAFT_0115 0.63 -1.9 112,536 + B158DRAFT_0115 0.63 -2.9 112,536 + B158DRAFT_0115 0.63 -2.9 112,544 - B158DRAFT_0115 0.64 -0.5 112,623 + B158DRAFT_0115 0.69 -2.3 112,718 - B158DRAFT_0115 0.75 -0.7 112,787 + B158DRAFT_0115 0.80 -1.8 112,795 - B158DRAFT_0115 0.80 -1.4 112,795 - B158DRAFT_0115 0.80 -0.7 112,795 - B158DRAFT_0115 0.80 -0.9 112,795 - B158DRAFT_0115 0.80 -1.2 112,814 + B158DRAFT_0115 0.81 -2.7 112,814 + B158DRAFT_0115 0.81 -2.2 112,979 - -1.5 113,097 + -2.7 113,097 + -2.5 113,097 + -2.4 113,097 + -1.8 113,099 + -2.2 113,105 - +0.1 113,105 - -0.2 113,105 - -0.4 113,107 - +1.2 113,113 - -0.3 113,174 + -1.8 113,184 + -4.2 113,192 - -0.4 113,192 - +0.1 113,209 + -3.7 113,217 - -0.0 113,219 + -1.2 113,219 + -1.2 113,227 - +0.4 113,228 - +0.2 113,229 - -0.5 113,366 - B158DRAFT_0116 0.10 +0.1 113,367 - B158DRAFT_0116 0.10 +0.6 113,520 + B158DRAFT_0116 0.18 -2.5 113,520 + B158DRAFT_0116 0.18 -2.5 113,528 - B158DRAFT_0116 0.18 +0.2 113,622 - B158DRAFT_0116 0.23 -0.4 113,679 + B158DRAFT_0116 0.26 +0.1 113,709 + B158DRAFT_0116 0.27 -3.2 113,784 - B158DRAFT_0116 0.31 -0.6 113,802 + B158DRAFT_0116 0.32 -1.6 113,808 - B158DRAFT_0116 0.32 +0.3 113,810 - B158DRAFT_0116 0.32 -0.4 113,824 - B158DRAFT_0116 0.33 -0.1 113,842 - B158DRAFT_0116 0.34 +0.1 113,902 + B158DRAFT_0116 0.37 -2.3 113,905 - B158DRAFT_0116 0.37 +0.1 113,905 - B158DRAFT_0116 0.37 -0.0 113,912 - B158DRAFT_0116 0.37 -0.2 113,912 - B158DRAFT_0116 0.37 +0.3 113,974 + B158DRAFT_0116 0.40 -3.0 113,975 - B158DRAFT_0116 0.40 -1.2 113,980 + B158DRAFT_0116 0.40 -2.1 113,982 + B158DRAFT_0116 0.41 -2.3 113,982 - B158DRAFT_0116 0.41 -0.4 113,990 - B158DRAFT_0116 0.41 -0.7 114,032 + B158DRAFT_0116 0.43 -2.5 114,057 + B158DRAFT_0116 0.44 -2.9 114,065 - B158DRAFT_0116 0.45 -0.4 114,114 - B158DRAFT_0116 0.47 -0.2 114,186 + B158DRAFT_0116 0.51 -2.7 114,249 + B158DRAFT_0116 0.54 -2.3 114,280 + B158DRAFT_0116 0.55 -1.8 114,333 + B158DRAFT_0116 0.58 -2.4 114,336 - B158DRAFT_0116 0.58 +0.6 114,403 + B158DRAFT_0116 0.61 -2.3 114,411 - B158DRAFT_0116 0.62 -0.2 114,452 - B158DRAFT_0116 0.64 -1.3 114,467 - B158DRAFT_0116 0.65 -0.7 114,476 - B158DRAFT_0116 0.65 -2.4 114,496 - B158DRAFT_0116 0.66 -3.2 114,498 + B158DRAFT_0116 0.66 -3.5 114,501 - B158DRAFT_0116 0.66 -1.0 114,525 + B158DRAFT_0116 0.67 -1.9 114,557 + B158DRAFT_0116 0.69 -2.2 114,726 + B158DRAFT_0116 0.77 -3.7 114,726 + B158DRAFT_0116 0.77 -2.0 114,734 - B158DRAFT_0116 0.78 -1.1 114,759 - B158DRAFT_0116 0.79 -2.3 114,786 + B158DRAFT_0116 0.80 -3.2 114,813 + B158DRAFT_0116 0.82 -3.4 114,859 - B158DRAFT_0116 0.84 -0.6 114,870 + B158DRAFT_0116 0.85 -1.1 114,878 + B158DRAFT_0116 0.85 -1.8 114,878 + B158DRAFT_0116 0.85 -2.1 114,886 - B158DRAFT_0116 0.85 -0.3 114,886 - B158DRAFT_0116 0.85 -0.6 114,910 - B158DRAFT_0116 0.87 -0.9 115,021 + -1.7 115,021 + -2.8 115,021 + -1.4 115,021 + -2.4 115,029 - -1.5 115,031 + -2.4 115,043 + -2.3 115,063 - -1.2 115,069 + -3.0 115,109 - -1.5 115,187 - -0.7 115,202 - +0.8 115,212 - B158DRAFT_0117 0.10 +0.0 115,212 - B158DRAFT_0117 0.10 +0.0 115,212 - B158DRAFT_0117 0.10 +0.6 115,232 + B158DRAFT_0117 0.17 -1.8 115,258 - B158DRAFT_0117 0.25 -0.5 115,258 - B158DRAFT_0117 0.25 -0.4 115,270 + B158DRAFT_0117 0.29 -3.9 115,375 + B158DRAFT_0117 0.64 -3.2 115,383 - B158DRAFT_0117 0.67 -1.5 115,386 - B158DRAFT_0117 0.68 -3.4 115,432 + B158DRAFT_0117 0.83 -3.7 115,489 - -0.4 115,501 - +0.3 115,541 + -3.9 115,560 + B158DRAFT_0118 0.12 -3.4 115,610 + B158DRAFT_0118 0.19 -2.6 115,615 + B158DRAFT_0118 0.20 -3.1 115,615 + B158DRAFT_0118 0.20 -4.0 115,623 - B158DRAFT_0118 0.21 +0.2 115,630 + B158DRAFT_0118 0.22 -2.7 115,736 + B158DRAFT_0118 0.38 -3.4 115,736 + B158DRAFT_0118 0.38 -3.1 115,736 + B158DRAFT_0118 0.38 -2.9 115,749 + B158DRAFT_0118 0.40 -3.3 115,757 + B158DRAFT_0118 0.41 -2.0 115,758 - B158DRAFT_0118 0.41 -1.6 115,768 + B158DRAFT_0118 0.42 -3.8 115,824 - B158DRAFT_0118 0.51 -1.0 115,889 - B158DRAFT_0118 0.60 -1.3 115,905 + B158DRAFT_0118 0.62 -3.8 115,905 + B158DRAFT_0118 0.62 -3.7 115,905 + B158DRAFT_0118 0.62 -3.3 115,913 - B158DRAFT_0118 0.64 -2.3 115,913 - B158DRAFT_0118 0.64 -2.0 115,913 - B158DRAFT_0118 0.64 -2.7 115,913 - B158DRAFT_0118 0.64 -2.0 115,915 + B158DRAFT_0118 0.64 -4.2 115,954 - B158DRAFT_0118 0.70 +0.6 115,973 + B158DRAFT_0118 0.72 -2.4 115,978 + B158DRAFT_0118 0.73 -2.9 115,981 - B158DRAFT_0118 0.74 -2.5 115,981 - B158DRAFT_0118 0.74 -2.2 115,981 - B158DRAFT_0118 0.74 -3.5 116,031 - B158DRAFT_0118 0.81 -2.9 116,059 + B158DRAFT_0118 0.85 -2.2 116,067 - B158DRAFT_0118 0.86 -2.9 116,090 + B158DRAFT_0118 0.90 -3.3 116,098 + -3.1 116,119 - -2.2 116,155 + -3.3
Or see this region's nucleotide sequence