Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0096

Experiment: m.b. D-Cycloserine 0.03125 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0095 and B158DRAFT_0096 are separated by 136 nucleotidesB158DRAFT_0096 and B158DRAFT_0097 are separated by 53 nucleotidesB158DRAFT_0097 and B158DRAFT_0098 are separated by 8 nucleotides B158DRAFT_0095: B158DRAFT_0095 - apolipoprotein N-acyltransferase, at 88,298 to 89,815 _0095 B158DRAFT_0096: B158DRAFT_0096 - Putative Mg2+ and Co2+ transporter CorC, at 89,952 to 90,809 _0096 B158DRAFT_0097: B158DRAFT_0097 - metalloprotein, YbeY/UPF0054 family, at 90,863 to 91,369 _0097 B158DRAFT_0098: B158DRAFT_0098 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 91,378 to 92,418 _0098 Position (kb) 89 90 91Strain fitness (log2 ratio) -3 -2 -1 0 1at 89.036 kb on - strand, within B158DRAFT_0095at 89.036 kb on - strand, within B158DRAFT_0095at 89.036 kb on - strand, within B158DRAFT_0095at 89.176 kb on + strand, within B158DRAFT_0095at 89.186 kb on + strand, within B158DRAFT_0095at 89.186 kb on + strand, within B158DRAFT_0095at 89.194 kb on - strand, within B158DRAFT_0095at 89.341 kb on + strand, within B158DRAFT_0095at 89.343 kb on + strand, within B158DRAFT_0095at 89.344 kb on - strand, within B158DRAFT_0095at 89.349 kb on - strand, within B158DRAFT_0095at 89.349 kb on - strand, within B158DRAFT_0095at 89.355 kb on + strand, within B158DRAFT_0095at 89.364 kb on + strand, within B158DRAFT_0095at 89.367 kb on - strand, within B158DRAFT_0095at 89.367 kb on - strand, within B158DRAFT_0095at 89.372 kb on - strand, within B158DRAFT_0095at 89.486 kb on - strand, within B158DRAFT_0095at 89.489 kb on + strand, within B158DRAFT_0095at 89.610 kb on - strand, within B158DRAFT_0095at 89.661 kb on - strand, within B158DRAFT_0095at 89.728 kb on + strandat 89.796 kb on + strandat 89.824 kb on + strandat 89.873 kb on + strandat 89.881 kb on - strandat 89.881 kb on - strandat 89.883 kb on + strandat 89.981 kb on + strandat 89.988 kb on - strandat 89.988 kb on - strandat 89.989 kb on - strandat 90.024 kb on - strandat 90.070 kb on + strand, within B158DRAFT_0096at 90.438 kb on - strand, within B158DRAFT_0096at 90.687 kb on - strand, within B158DRAFT_0096at 90.706 kb on + strand, within B158DRAFT_0096at 90.884 kb on - strandat 91.420 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.435 kb on - strandat 91.581 kb on - strand, within B158DRAFT_0098at 91.581 kb on - strand, within B158DRAFT_0098at 91.588 kb on - strand, within B158DRAFT_0098at 91.619 kb on - strand, within B158DRAFT_0098at 91.685 kb on - strand, within B158DRAFT_0098at 91.685 kb on - strand, within B158DRAFT_0098at 91.690 kb on - strand, within B158DRAFT_0098at 91.698 kb on - strand, within B158DRAFT_0098

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. D-Cycloserine 0.03125 mg/ml
remove
89,036 - B158DRAFT_0095 0.49 +0.6
89,036 - B158DRAFT_0095 0.49 +0.9
89,036 - B158DRAFT_0095 0.49 +0.6
89,176 + B158DRAFT_0095 0.58 +0.2
89,186 + B158DRAFT_0095 0.58 +0.3
89,186 + B158DRAFT_0095 0.58 +0.6
89,194 - B158DRAFT_0095 0.59 +0.3
89,341 + B158DRAFT_0095 0.69 +0.7
89,343 + B158DRAFT_0095 0.69 +1.0
89,344 - B158DRAFT_0095 0.69 +0.3
89,349 - B158DRAFT_0095 0.69 +0.8
89,349 - B158DRAFT_0095 0.69 +1.4
89,355 + B158DRAFT_0095 0.70 +0.5
89,364 + B158DRAFT_0095 0.70 +0.2
89,367 - B158DRAFT_0095 0.70 +0.7
89,367 - B158DRAFT_0095 0.70 -0.1
89,372 - B158DRAFT_0095 0.71 -0.0
89,486 - B158DRAFT_0095 0.78 -0.0
89,489 + B158DRAFT_0095 0.78 +1.0
89,610 - B158DRAFT_0095 0.86 +0.6
89,661 - B158DRAFT_0095 0.90 +1.0
89,728 + +0.5
89,796 + +0.5
89,824 + +0.3
89,873 + +0.6
89,881 - -0.2
89,881 - +0.8
89,883 + -0.6
89,981 + -0.3
89,988 - +0.0
89,988 - +0.2
89,989 - +0.3
90,024 - -0.4
90,070 + B158DRAFT_0096 0.14 -1.2
90,438 - B158DRAFT_0096 0.57 -1.6
90,687 - B158DRAFT_0096 0.86 -2.8
90,706 + B158DRAFT_0096 0.88 -0.4
90,884 - +0.4
91,420 - +0.2
91,435 - +0.2
91,435 - -0.4
91,435 - -0.3
91,435 - +0.6
91,435 - +0.9
91,435 - +0.2
91,581 - B158DRAFT_0098 0.20 +0.3
91,581 - B158DRAFT_0098 0.20 -0.3
91,588 - B158DRAFT_0098 0.20 -0.4
91,619 - B158DRAFT_0098 0.23 +0.8
91,685 - B158DRAFT_0098 0.29 -0.8
91,685 - B158DRAFT_0098 0.29 +0.7
91,690 - B158DRAFT_0098 0.30 -0.2
91,698 - B158DRAFT_0098 0.31 -0.4

Or see this region's nucleotide sequence