Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2323

Experiment: m.b. A22 0.0109375 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2322 and B158DRAFT_2323 are separated by 71 nucleotidesB158DRAFT_2323 and B158DRAFT_2324 are separated by 60 nucleotides B158DRAFT_2322: B158DRAFT_2322 - phosphoserine aminotransferase apoenzyme (EC 2.6.1.52), at 488,297 to 489,382 _2322 B158DRAFT_2323: B158DRAFT_2323 - Uncharacterized protein conserved in bacteria, at 489,454 to 489,762 _2323 B158DRAFT_2324: B158DRAFT_2324 - Protease II, at 489,823 to 492,027 _2324 Position (kb) 489 490Strain fitness (log2 ratio) -1 0 1 2at 489.438 kb on + strandat 489.555 kb on + strand, within B158DRAFT_2323at 489.692 kb on + strand, within B158DRAFT_2323at 489.692 kb on + strand, within B158DRAFT_2323at 489.864 kb on + strandat 489.907 kb on + strandat 489.915 kb on - strandat 489.915 kb on - strandat 489.915 kb on - strandat 489.917 kb on + strandat 489.925 kb on - strandat 489.929 kb on + strandat 490.001 kb on - strandat 490.023 kb on + strandat 490.023 kb on + strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.031 kb on - strandat 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.051 kb on + strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.059 kb on - strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.069 kb on + strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.077 kb on - strand, within B158DRAFT_2324at 490.103 kb on - strand, within B158DRAFT_2324at 490.131 kb on + strand, within B158DRAFT_2324at 490.155 kb on + strand, within B158DRAFT_2324at 490.155 kb on + strand, within B158DRAFT_2324at 490.204 kb on + strand, within B158DRAFT_2324at 490.250 kb on + strand, within B158DRAFT_2324at 490.270 kb on + strand, within B158DRAFT_2324at 490.280 kb on + strand, within B158DRAFT_2324at 490.288 kb on + strand, within B158DRAFT_2324at 490.288 kb on - strand, within B158DRAFT_2324at 490.405 kb on + strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.413 kb on - strand, within B158DRAFT_2324at 490.415 kb on + strand, within B158DRAFT_2324at 490.415 kb on + strand, within B158DRAFT_2324at 490.423 kb on - strand, within B158DRAFT_2324at 490.437 kb on + strand, within B158DRAFT_2324at 490.450 kb on + strand, within B158DRAFT_2324at 490.592 kb on - strand, within B158DRAFT_2324at 490.624 kb on - strand, within B158DRAFT_2324at 490.721 kb on - strand, within B158DRAFT_2324at 490.737 kb on + strand, within B158DRAFT_2324

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
remove
489,438 + -0.0
489,555 + B158DRAFT_2323 0.33 -0.4
489,692 + B158DRAFT_2323 0.77 -0.4
489,692 + B158DRAFT_2323 0.77 -0.2
489,864 + +0.0
489,907 + -0.1
489,915 - -0.4
489,915 - -0.4
489,915 - -0.6
489,917 + -0.8
489,925 - -1.3
489,929 + +0.1
490,001 - -0.6
490,023 + -0.6
490,023 + -0.7
490,031 - -0.7
490,031 - -0.0
490,031 - -0.9
490,031 - -1.3
490,051 + B158DRAFT_2324 0.10 -1.0
490,051 + B158DRAFT_2324 0.10 +0.3
490,051 + B158DRAFT_2324 0.10 -0.3
490,051 + B158DRAFT_2324 0.10 -0.5
490,051 + B158DRAFT_2324 0.10 +1.0
490,051 + B158DRAFT_2324 0.10 -0.0
490,051 + B158DRAFT_2324 0.10 -0.1
490,051 + B158DRAFT_2324 0.10 -0.3
490,051 + B158DRAFT_2324 0.10 -0.5
490,051 + B158DRAFT_2324 0.10 +0.2
490,051 + B158DRAFT_2324 0.10 -0.4
490,059 - B158DRAFT_2324 0.11 -1.2
490,059 - B158DRAFT_2324 0.11 -0.4
490,059 - B158DRAFT_2324 0.11 -0.2
490,059 - B158DRAFT_2324 0.11 -0.2
490,059 - B158DRAFT_2324 0.11 -0.4
490,059 - B158DRAFT_2324 0.11 +0.1
490,059 - B158DRAFT_2324 0.11 -0.8
490,059 - B158DRAFT_2324 0.11 -0.5
490,059 - B158DRAFT_2324 0.11 -0.7
490,069 + B158DRAFT_2324 0.11 -0.8
490,069 + B158DRAFT_2324 0.11 -0.7
490,069 + B158DRAFT_2324 0.11 -0.7
490,077 - B158DRAFT_2324 0.12 +0.1
490,077 - B158DRAFT_2324 0.12 -0.6
490,077 - B158DRAFT_2324 0.12 +1.1
490,103 - B158DRAFT_2324 0.13 -0.1
490,131 + B158DRAFT_2324 0.14 -0.1
490,155 + B158DRAFT_2324 0.15 -0.3
490,155 + B158DRAFT_2324 0.15 +0.2
490,204 + B158DRAFT_2324 0.17 -0.1
490,250 + B158DRAFT_2324 0.19 -0.4
490,270 + B158DRAFT_2324 0.20 -0.5
490,280 + B158DRAFT_2324 0.21 -0.1
490,288 + B158DRAFT_2324 0.21 -0.4
490,288 - B158DRAFT_2324 0.21 -0.2
490,405 + B158DRAFT_2324 0.26 -1.1
490,413 - B158DRAFT_2324 0.27 -0.2
490,413 - B158DRAFT_2324 0.27 -0.2
490,413 - B158DRAFT_2324 0.27 +0.6
490,413 - B158DRAFT_2324 0.27 -0.5
490,413 - B158DRAFT_2324 0.27 +0.2
490,413 - B158DRAFT_2324 0.27 +1.0
490,415 + B158DRAFT_2324 0.27 +0.5
490,415 + B158DRAFT_2324 0.27 -1.0
490,423 - B158DRAFT_2324 0.27 -0.2
490,437 + B158DRAFT_2324 0.28 -0.4
490,450 + B158DRAFT_2324 0.28 +0.2
490,592 - B158DRAFT_2324 0.35 +2.1
490,624 - B158DRAFT_2324 0.36 -0.4
490,721 - B158DRAFT_2324 0.41 +0.6
490,737 + B158DRAFT_2324 0.41 -1.4

Or see this region's nucleotide sequence