Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0916

Experiment: m.b. A22 0.0109375 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0914 and B158DRAFT_0915 are separated by 53 nucleotidesB158DRAFT_0915 and B158DRAFT_0916 are separated by 28 nucleotidesB158DRAFT_0916 and B158DRAFT_0917 are separated by 161 nucleotidesB158DRAFT_0917 and B158DRAFT_0918 are separated by 15 nucleotides B158DRAFT_0914: B158DRAFT_0914 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 940,219 to 942,651 _0914 B158DRAFT_0915: B158DRAFT_0915 - hypothetical protein, at 942,705 to 943,592 _0915 B158DRAFT_0916: B158DRAFT_0916 - Nitroreductase, at 943,621 to 944,223 _0916 B158DRAFT_0917: B158DRAFT_0917 - Sel1 repeat., at 944,385 to 945,206 _0917 B158DRAFT_0918: B158DRAFT_0918 - hypothetical protein, at 945,222 to 945,740 _0918 Position (kb) 943 944 945Strain fitness (log2 ratio) -1 0 1 2at 942.649 kb on - strandat 942.759 kb on + strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.767 kb on - strandat 942.769 kb on + strandat 942.784 kb on + strandat 942.794 kb on - strand, within B158DRAFT_0915at 942.799 kb on - strand, within B158DRAFT_0915at 942.852 kb on + strand, within B158DRAFT_0915at 942.902 kb on - strand, within B158DRAFT_0915at 942.961 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.963 kb on + strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 942.971 kb on - strand, within B158DRAFT_0915at 943.021 kb on - strand, within B158DRAFT_0915at 943.093 kb on + strand, within B158DRAFT_0915at 943.197 kb on + strand, within B158DRAFT_0915at 943.270 kb on - strand, within B158DRAFT_0915at 943.398 kb on + strand, within B158DRAFT_0915at 943.418 kb on - strand, within B158DRAFT_0915at 943.418 kb on - strand, within B158DRAFT_0915at 943.425 kb on + strand, within B158DRAFT_0915at 943.443 kb on - strand, within B158DRAFT_0915at 943.482 kb on + strand, within B158DRAFT_0915at 943.489 kb on + strand, within B158DRAFT_0915at 943.508 kb on - strandat 943.510 kb on + strandat 943.510 kb on + strandat 943.510 kb on + strandat 943.518 kb on - strandat 943.532 kb on - strandat 944.252 kb on - strandat 944.279 kb on + strandat 944.286 kb on + strandat 944.287 kb on - strandat 944.294 kb on - strandat 944.307 kb on + strandat 944.307 kb on + strandat 944.370 kb on - strandat 944.372 kb on + strandat 944.396 kb on + strandat 944.396 kb on + strandat 944.419 kb on + strandat 944.427 kb on - strandat 944.427 kb on - strandat 944.429 kb on + strandat 944.497 kb on - strand, within B158DRAFT_0917at 944.497 kb on - strand, within B158DRAFT_0917at 944.570 kb on - strand, within B158DRAFT_0917at 944.588 kb on + strand, within B158DRAFT_0917at 944.602 kb on + strand, within B158DRAFT_0917at 944.602 kb on + strand, within B158DRAFT_0917at 944.602 kb on + strand, within B158DRAFT_0917at 944.610 kb on - strand, within B158DRAFT_0917at 944.610 kb on - strand, within B158DRAFT_0917at 944.610 kb on - strand, within B158DRAFT_0917at 944.744 kb on + strand, within B158DRAFT_0917at 944.790 kb on + strand, within B158DRAFT_0917at 944.795 kb on - strand, within B158DRAFT_0917at 944.800 kb on - strand, within B158DRAFT_0917at 944.800 kb on - strand, within B158DRAFT_0917at 944.800 kb on - strand, within B158DRAFT_0917at 944.826 kb on + strand, within B158DRAFT_0917at 944.826 kb on + strand, within B158DRAFT_0917at 944.875 kb on + strand, within B158DRAFT_0917at 944.888 kb on - strand, within B158DRAFT_0917at 944.898 kb on + strand, within B158DRAFT_0917at 944.917 kb on + strand, within B158DRAFT_0917at 944.917 kb on + strand, within B158DRAFT_0917at 944.917 kb on + strand, within B158DRAFT_0917at 944.917 kb on + strand, within B158DRAFT_0917at 944.918 kb on + strand, within B158DRAFT_0917at 944.925 kb on - strand, within B158DRAFT_0917at 944.925 kb on - strand, within B158DRAFT_0917at 944.925 kb on - strand, within B158DRAFT_0917at 944.925 kb on - strand, within B158DRAFT_0917at 944.926 kb on - strand, within B158DRAFT_0917at 944.965 kb on + strand, within B158DRAFT_0917at 944.973 kb on - strand, within B158DRAFT_0917at 944.988 kb on + strand, within B158DRAFT_0917at 945.015 kb on - strand, within B158DRAFT_0917at 945.015 kb on - strand, within B158DRAFT_0917at 945.043 kb on - strand, within B158DRAFT_0917at 945.105 kb on + strand, within B158DRAFT_0917

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml
remove
942,649 - -0.8
942,759 + -0.1
942,767 - +0.8
942,767 - +0.7
942,767 - -0.3
942,767 - -0.3
942,769 + -0.5
942,784 + -0.5
942,794 - B158DRAFT_0915 0.10 +0.7
942,799 - B158DRAFT_0915 0.11 +0.1
942,852 + B158DRAFT_0915 0.17 +1.2
942,902 - B158DRAFT_0915 0.22 -0.2
942,961 + B158DRAFT_0915 0.29 +0.6
942,963 + B158DRAFT_0915 0.29 +0.0
942,963 + B158DRAFT_0915 0.29 -0.0
942,963 + B158DRAFT_0915 0.29 +0.1
942,963 + B158DRAFT_0915 0.29 -0.0
942,963 + B158DRAFT_0915 0.29 +0.2
942,971 - B158DRAFT_0915 0.30 -0.0
942,971 - B158DRAFT_0915 0.30 +0.2
942,971 - B158DRAFT_0915 0.30 +0.3
942,971 - B158DRAFT_0915 0.30 +0.0
942,971 - B158DRAFT_0915 0.30 -0.5
942,971 - B158DRAFT_0915 0.30 +0.1
942,971 - B158DRAFT_0915 0.30 +0.2
943,021 - B158DRAFT_0915 0.36 -0.2
943,093 + B158DRAFT_0915 0.44 +0.1
943,197 + B158DRAFT_0915 0.55 +0.3
943,270 - B158DRAFT_0915 0.64 +0.1
943,398 + B158DRAFT_0915 0.78 -0.6
943,418 - B158DRAFT_0915 0.80 -0.2
943,418 - B158DRAFT_0915 0.80 +0.4
943,425 + B158DRAFT_0915 0.81 +0.0
943,443 - B158DRAFT_0915 0.83 +0.4
943,482 + B158DRAFT_0915 0.88 -0.0
943,489 + B158DRAFT_0915 0.88 +0.0
943,508 - -1.3
943,510 + +0.2
943,510 + +0.2
943,510 + -0.1
943,518 - -0.0
943,532 - +2.4
944,252 - +0.6
944,279 + +1.0
944,286 + +0.2
944,287 - +1.0
944,294 - +0.7
944,307 + +0.4
944,307 + +0.8
944,370 - +1.3
944,372 + +0.5
944,396 + +0.8
944,396 + +0.2
944,419 + +0.3
944,427 - +1.0
944,427 - +0.3
944,429 + +0.9
944,497 - B158DRAFT_0917 0.14 +0.6
944,497 - B158DRAFT_0917 0.14 +0.8
944,570 - B158DRAFT_0917 0.23 +0.4
944,588 + B158DRAFT_0917 0.25 +0.9
944,602 + B158DRAFT_0917 0.26 +0.9
944,602 + B158DRAFT_0917 0.26 +0.5
944,602 + B158DRAFT_0917 0.26 -0.0
944,610 - B158DRAFT_0917 0.27 +1.0
944,610 - B158DRAFT_0917 0.27 +1.2
944,610 - B158DRAFT_0917 0.27 +0.6
944,744 + B158DRAFT_0917 0.44 +0.9
944,790 + B158DRAFT_0917 0.49 +1.0
944,795 - B158DRAFT_0917 0.50 +0.9
944,800 - B158DRAFT_0917 0.50 +1.2
944,800 - B158DRAFT_0917 0.50 +0.4
944,800 - B158DRAFT_0917 0.50 +0.8
944,826 + B158DRAFT_0917 0.54 +0.7
944,826 + B158DRAFT_0917 0.54 +1.1
944,875 + B158DRAFT_0917 0.60 -0.2
944,888 - B158DRAFT_0917 0.61 +0.6
944,898 + B158DRAFT_0917 0.62 +0.5
944,917 + B158DRAFT_0917 0.65 +0.8
944,917 + B158DRAFT_0917 0.65 +1.1
944,917 + B158DRAFT_0917 0.65 +0.4
944,917 + B158DRAFT_0917 0.65 +1.2
944,918 + B158DRAFT_0917 0.65 +0.7
944,925 - B158DRAFT_0917 0.66 +0.5
944,925 - B158DRAFT_0917 0.66 +0.1
944,925 - B158DRAFT_0917 0.66 +0.0
944,925 - B158DRAFT_0917 0.66 +0.8
944,926 - B158DRAFT_0917 0.66 +0.8
944,965 + B158DRAFT_0917 0.71 +0.6
944,973 - B158DRAFT_0917 0.72 +1.2
944,988 + B158DRAFT_0917 0.73 -0.9
945,015 - B158DRAFT_0917 0.77 +1.0
945,015 - B158DRAFT_0917 0.77 +0.8
945,043 - B158DRAFT_0917 0.80 +0.6
945,105 + B158DRAFT_0917 0.88 +0.7

Or see this region's nucleotide sequence