Experiment: m.b. A22 0.0109375 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0466 and B158DRAFT_0467 overlap by 8 nucleotides B158DRAFT_0467 and B158DRAFT_0468 are separated by 2 nucleotides B158DRAFT_0468 and B158DRAFT_0469 are separated by 2 nucleotides
B158DRAFT_0466: B158DRAFT_0466 - RmlD substrate binding domain., at 468,997 to 469,791
_0466
B158DRAFT_0467: B158DRAFT_0467 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 469,784 to 470,332
_0467
B158DRAFT_0468: B158DRAFT_0468 - glycyl-tRNA synthetase beta chain (EC 6.1.1.14), at 470,335 to 472,395
_0468
B158DRAFT_0469: B158DRAFT_0469 - glycyl-tRNA synthetase alpha chain (EC 6.1.1.14), at 472,398 to 473,462
_0469
Position (kb) 470
471
472
473 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 469.336 kb on - strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.376 kb on + strand, within B158DRAFT_0466 at 469.384 kb on - strand, within B158DRAFT_0466 at 469.415 kb on + strand, within B158DRAFT_0466 at 469.415 kb on + strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.423 kb on - strand, within B158DRAFT_0466 at 469.454 kb on + strand, within B158DRAFT_0466 at 469.462 kb on - strand, within B158DRAFT_0466 at 469.466 kb on - strand, within B158DRAFT_0466 at 469.540 kb on + strand, within B158DRAFT_0466 at 469.575 kb on + strand, within B158DRAFT_0466 at 469.575 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.676 kb on + strand, within B158DRAFT_0466 at 469.684 kb on - strand, within B158DRAFT_0466 at 469.684 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.703 kb on - strand, within B158DRAFT_0466 at 469.705 kb on + strand, within B158DRAFT_0466 at 469.757 kb on - strand at 469.794 kb on + strand at 469.825 kb on - strand at 469.875 kb on + strand, within B158DRAFT_0467 at 469.883 kb on - strand, within B158DRAFT_0467 at 469.883 kb on - strand, within B158DRAFT_0467 at 469.885 kb on + strand, within B158DRAFT_0467 at 469.888 kb on + strand, within B158DRAFT_0467 at 469.934 kb on - strand, within B158DRAFT_0467 at 470.038 kb on + strand, within B158DRAFT_0467 at 470.039 kb on - strand, within B158DRAFT_0467 at 470.156 kb on - strand, within B158DRAFT_0467 at 470.183 kb on - strand, within B158DRAFT_0467 at 470.257 kb on + strand, within B158DRAFT_0467 at 470.330 kb on - strand at 470.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. A22 0.0109375 mg/ml remove 469,336 - B158DRAFT_0466 0.43 +0.2 469,376 + B158DRAFT_0466 0.48 +0.0 469,376 + B158DRAFT_0466 0.48 -0.8 469,376 + B158DRAFT_0466 0.48 -0.3 469,376 + B158DRAFT_0466 0.48 -1.0 469,376 + B158DRAFT_0466 0.48 -0.9 469,376 + B158DRAFT_0466 0.48 +0.0 469,384 - B158DRAFT_0466 0.49 -0.0 469,415 + B158DRAFT_0466 0.53 -0.4 469,415 + B158DRAFT_0466 0.53 +0.2 469,423 - B158DRAFT_0466 0.54 -0.6 469,423 - B158DRAFT_0466 0.54 -0.4 469,423 - B158DRAFT_0466 0.54 -0.3 469,454 + B158DRAFT_0466 0.57 -0.8 469,462 - B158DRAFT_0466 0.58 +0.8 469,466 - B158DRAFT_0466 0.59 -0.3 469,540 + B158DRAFT_0466 0.68 -0.1 469,575 + B158DRAFT_0466 0.73 -0.9 469,575 + B158DRAFT_0466 0.73 -0.1 469,676 + B158DRAFT_0466 0.85 -0.3 469,676 + B158DRAFT_0466 0.85 +0.5 469,676 + B158DRAFT_0466 0.85 -0.6 469,676 + B158DRAFT_0466 0.85 +0.5 469,684 - B158DRAFT_0466 0.86 +0.3 469,684 - B158DRAFT_0466 0.86 -0.4 469,703 - B158DRAFT_0466 0.89 -0.8 469,703 - B158DRAFT_0466 0.89 -0.9 469,703 - B158DRAFT_0466 0.89 -0.3 469,703 - B158DRAFT_0466 0.89 +0.1 469,705 + B158DRAFT_0466 0.89 -0.1 469,757 - -1.1 469,794 + -0.1 469,825 - -1.9 469,875 + B158DRAFT_0467 0.17 -2.8 469,883 - B158DRAFT_0467 0.18 -1.4 469,883 - B158DRAFT_0467 0.18 -3.9 469,885 + B158DRAFT_0467 0.18 -1.4 469,888 + B158DRAFT_0467 0.19 -2.4 469,934 - B158DRAFT_0467 0.27 -3.5 470,038 + B158DRAFT_0467 0.46 -2.8 470,039 - B158DRAFT_0467 0.46 -3.5 470,156 - B158DRAFT_0467 0.68 -2.4 470,183 - B158DRAFT_0467 0.73 -2.9 470,257 + B158DRAFT_0467 0.86 -2.3 470,330 - +0.4 470,380 - -0.5
Or see this region's nucleotide sequence