Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2468

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2467 and B158DRAFT_2468 are separated by 10 nucleotidesB158DRAFT_2468 and B158DRAFT_2469 are separated by 11 nucleotidesB158DRAFT_2469 and B158DRAFT_2470 are separated by 91 nucleotidesB158DRAFT_2470 and B158DRAFT_2471 are separated by 189 nucleotides B158DRAFT_2467: B158DRAFT_2467 - Outer membrane cobalamin receptor protein, at 649,723 to 651,681 _2467 B158DRAFT_2468: B158DRAFT_2468 - ATP:cob(I)alamin adenosyltransferase, at 651,692 to 652,240 _2468 B158DRAFT_2469: B158DRAFT_2469 - hypothetical protein, at 652,252 to 652,779 _2469 B158DRAFT_2470: B158DRAFT_2470 - tRNA_Ser_GGA, at 652,871 to 652,961 _2470 B158DRAFT_2471: B158DRAFT_2471 - Restriction endonuclease, at 653,151 to 654,068 _2471 Position (kb) 651 652 653Strain fitness (log2 ratio) -3 -2 -1 0 1at 650.818 kb on - strand, within B158DRAFT_2467at 650.902 kb on + strand, within B158DRAFT_2467at 651.063 kb on + strand, within B158DRAFT_2467at 651.071 kb on - strand, within B158DRAFT_2467at 651.089 kb on + strand, within B158DRAFT_2467at 651.097 kb on - strand, within B158DRAFT_2467at 651.097 kb on - strand, within B158DRAFT_2467at 651.159 kb on + strand, within B158DRAFT_2467at 651.281 kb on - strand, within B158DRAFT_2467at 651.325 kb on - strand, within B158DRAFT_2467at 651.405 kb on - strand, within B158DRAFT_2467at 651.407 kb on + strand, within B158DRAFT_2467at 651.407 kb on + strand, within B158DRAFT_2467at 651.514 kb on + strandat 651.627 kb on + strandat 651.627 kb on + strandat 651.627 kb on + strandat 651.635 kb on - strandat 651.635 kb on - strandat 651.712 kb on + strandat 651.712 kb on + strandat 651.712 kb on + strandat 651.717 kb on + strandat 651.717 kb on + strandat 651.717 kb on + strandat 651.720 kb on - strandat 651.722 kb on + strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.725 kb on - strandat 651.745 kb on - strandat 651.812 kb on - strand, within B158DRAFT_2468at 651.863 kb on + strand, within B158DRAFT_2468at 651.871 kb on - strand, within B158DRAFT_2468at 651.907 kb on + strand, within B158DRAFT_2468at 651.923 kb on + strand, within B158DRAFT_2468at 651.928 kb on + strand, within B158DRAFT_2468at 651.928 kb on + strand, within B158DRAFT_2468at 651.931 kb on - strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.933 kb on + strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.941 kb on - strand, within B158DRAFT_2468at 651.963 kb on - strand, within B158DRAFT_2468at 651.965 kb on - strand, within B158DRAFT_2468at 652.049 kb on - strand, within B158DRAFT_2468at 652.075 kb on + strand, within B158DRAFT_2468at 652.089 kb on + strand, within B158DRAFT_2468at 652.141 kb on + strand, within B158DRAFT_2468at 652.274 kb on + strandat 652.274 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.280 kb on + strandat 652.288 kb on - strandat 652.288 kb on - strandat 652.288 kb on - strandat 652.359 kb on + strand, within B158DRAFT_2469at 652.452 kb on + strand, within B158DRAFT_2469at 652.480 kb on + strand, within B158DRAFT_2469at 652.495 kb on - strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.497 kb on + strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.505 kb on - strand, within B158DRAFT_2469at 652.655 kb on - strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.660 kb on + strand, within B158DRAFT_2469at 652.668 kb on - strand, within B158DRAFT_2469at 652.743 kb on + strandat 652.754 kb on + strandat 652.762 kb on - strandat 652.838 kb on + strandat 652.912 kb on + strand, within B158DRAFT_2470at 652.927 kb on - strand, within B158DRAFT_2470at 652.961 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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650,818 - B158DRAFT_2467 0.56 -1.3
650,902 + B158DRAFT_2467 0.60 +0.0
651,063 + B158DRAFT_2467 0.68 +0.2
651,071 - B158DRAFT_2467 0.69 -0.4
651,089 + B158DRAFT_2467 0.70 -0.0
651,097 - B158DRAFT_2467 0.70 -1.0
651,097 - B158DRAFT_2467 0.70 +0.1
651,159 + B158DRAFT_2467 0.73 -0.1
651,281 - B158DRAFT_2467 0.80 -0.8
651,325 - B158DRAFT_2467 0.82 -1.0
651,405 - B158DRAFT_2467 0.86 +0.0
651,407 + B158DRAFT_2467 0.86 +0.1
651,407 + B158DRAFT_2467 0.86 +0.3
651,514 + +0.3
651,627 + -0.6
651,627 + -0.4
651,627 + -0.3
651,635 - -0.4
651,635 - -0.5
651,712 + -0.7
651,712 + -0.8
651,712 + -0.8
651,717 + -1.0
651,717 + -0.3
651,717 + -1.0
651,720 - -0.1
651,722 + -0.7
651,725 - -0.6
651,725 - -0.9
651,725 - -1.1
651,725 - -1.0
651,725 - -0.3
651,725 - -0.4
651,745 - -1.7
651,812 - B158DRAFT_2468 0.22 -0.2
651,863 + B158DRAFT_2468 0.31 -0.3
651,871 - B158DRAFT_2468 0.33 -3.1
651,907 + B158DRAFT_2468 0.39 -0.7
651,923 + B158DRAFT_2468 0.42 -0.1
651,928 + B158DRAFT_2468 0.43 -1.1
651,928 + B158DRAFT_2468 0.43 +0.0
651,931 - B158DRAFT_2468 0.44 -0.7
651,933 + B158DRAFT_2468 0.44 -0.4
651,933 + B158DRAFT_2468 0.44 -1.2
651,933 + B158DRAFT_2468 0.44 -0.6
651,933 + B158DRAFT_2468 0.44 -0.7
651,941 - B158DRAFT_2468 0.45 +0.7
651,941 - B158DRAFT_2468 0.45 -0.7
651,941 - B158DRAFT_2468 0.45 -1.3
651,941 - B158DRAFT_2468 0.45 -0.4
651,941 - B158DRAFT_2468 0.45 -0.4
651,963 - B158DRAFT_2468 0.49 -0.4
651,965 - B158DRAFT_2468 0.50 -0.9
652,049 - B158DRAFT_2468 0.65 -1.1
652,075 + B158DRAFT_2468 0.70 -0.0
652,089 + B158DRAFT_2468 0.72 -0.9
652,141 + B158DRAFT_2468 0.82 -0.8
652,274 + +0.0
652,274 + -1.2
652,280 + -0.8
652,280 + +0.3
652,280 + -0.6
652,280 + -0.8
652,288 - +0.0
652,288 - -0.7
652,288 - -0.4
652,359 + B158DRAFT_2469 0.20 -0.4
652,452 + B158DRAFT_2469 0.38 -0.4
652,480 + B158DRAFT_2469 0.43 -0.4
652,495 - B158DRAFT_2469 0.46 -0.3
652,497 + B158DRAFT_2469 0.46 -0.4
652,497 + B158DRAFT_2469 0.46 -0.3
652,497 + B158DRAFT_2469 0.46 -0.6
652,497 + B158DRAFT_2469 0.46 -0.4
652,497 + B158DRAFT_2469 0.46 -0.8
652,505 - B158DRAFT_2469 0.48 +0.2
652,505 - B158DRAFT_2469 0.48 -0.1
652,505 - B158DRAFT_2469 0.48 +0.3
652,655 - B158DRAFT_2469 0.76 -1.2
652,660 + B158DRAFT_2469 0.77 +1.4
652,660 + B158DRAFT_2469 0.77 -0.1
652,660 + B158DRAFT_2469 0.77 -0.6
652,668 - B158DRAFT_2469 0.79 -0.2
652,743 + +0.0
652,754 + -0.5
652,762 - -0.2
652,838 + +0.8
652,912 + B158DRAFT_2470 0.45 +0.8
652,927 - B158DRAFT_2470 0.62 -0.1
652,961 + +0.3

Or see this region's nucleotide sequence