Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2346

Experiment: m.b. Bacitracin 1.5 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2345 and B158DRAFT_2346 are separated by 42 nucleotidesB158DRAFT_2346 and B158DRAFT_2347 overlap by 8 nucleotides B158DRAFT_2345: B158DRAFT_2345 - hypothetical protein, at 510,440 to 511,897 _2345 B158DRAFT_2346: B158DRAFT_2346 - hypothetical protein, at 511,940 to 512,347 _2346 B158DRAFT_2347: B158DRAFT_2347 - Periplasmic protein involved in polysaccharide export, at 512,340 to 514,139 _2347 Position (kb) 511 512 513Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 510.947 kb on - strand, within B158DRAFT_2345at 510.962 kb on - strand, within B158DRAFT_2345at 510.963 kb on - strand, within B158DRAFT_2345at 511.061 kb on - strand, within B158DRAFT_2345at 511.068 kb on + strand, within B158DRAFT_2345at 511.073 kb on + strand, within B158DRAFT_2345at 511.076 kb on - strand, within B158DRAFT_2345at 511.150 kb on + strand, within B158DRAFT_2345at 511.151 kb on + strand, within B158DRAFT_2345at 511.158 kb on + strand, within B158DRAFT_2345at 511.158 kb on + strand, within B158DRAFT_2345at 511.159 kb on + strand, within B158DRAFT_2345at 511.166 kb on + strand, within B158DRAFT_2345at 511.166 kb on - strand, within B158DRAFT_2345at 511.166 kb on - strand, within B158DRAFT_2345at 511.174 kb on - strand, within B158DRAFT_2345at 511.174 kb on - strand, within B158DRAFT_2345at 511.200 kb on - strand, within B158DRAFT_2345at 511.202 kb on + strand, within B158DRAFT_2345at 511.202 kb on + strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.210 kb on - strand, within B158DRAFT_2345at 511.258 kb on - strand, within B158DRAFT_2345at 511.311 kb on + strand, within B158DRAFT_2345at 511.422 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.533 kb on + strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.541 kb on - strand, within B158DRAFT_2345at 511.593 kb on + strand, within B158DRAFT_2345at 512.014 kb on - strand, within B158DRAFT_2346at 512.315 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
remove
510,947 - B158DRAFT_2345 0.35 -0.8
510,962 - B158DRAFT_2345 0.36 -0.2
510,963 - B158DRAFT_2345 0.36 +0.2
511,061 - B158DRAFT_2345 0.43 -0.8
511,068 + B158DRAFT_2345 0.43 -4.4
511,073 + B158DRAFT_2345 0.43 -2.1
511,076 - B158DRAFT_2345 0.44 -0.3
511,150 + B158DRAFT_2345 0.49 -3.6
511,151 + B158DRAFT_2345 0.49 -3.3
511,158 + B158DRAFT_2345 0.49 -0.7
511,158 + B158DRAFT_2345 0.49 -5.2
511,159 + B158DRAFT_2345 0.49 -3.2
511,166 + B158DRAFT_2345 0.50 -3.4
511,166 - B158DRAFT_2345 0.50 +0.3
511,166 - B158DRAFT_2345 0.50 +0.6
511,174 - B158DRAFT_2345 0.50 +0.1
511,174 - B158DRAFT_2345 0.50 -1.3
511,200 - B158DRAFT_2345 0.52 -1.6
511,202 + B158DRAFT_2345 0.52 -4.5
511,202 + B158DRAFT_2345 0.52 -4.3
511,210 - B158DRAFT_2345 0.53 -2.4
511,210 - B158DRAFT_2345 0.53 -0.0
511,210 - B158DRAFT_2345 0.53 -0.8
511,258 - B158DRAFT_2345 0.56 -1.0
511,311 + B158DRAFT_2345 0.60 -3.3
511,422 + B158DRAFT_2345 0.67 -2.1
511,533 + B158DRAFT_2345 0.75 -5.0
511,533 + B158DRAFT_2345 0.75 -3.2
511,533 + B158DRAFT_2345 0.75 -1.9
511,533 + B158DRAFT_2345 0.75 -2.1
511,533 + B158DRAFT_2345 0.75 -4.1
511,541 - B158DRAFT_2345 0.76 +2.5
511,541 - B158DRAFT_2345 0.76 +2.4
511,541 - B158DRAFT_2345 0.76 +2.8
511,593 + B158DRAFT_2345 0.79 -1.4
512,014 - B158DRAFT_2346 0.18 +2.9
512,315 + +2.0

Or see this region's nucleotide sequence