Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1954

Experiment: m.b. Bacitracin 1.5 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1953 and B158DRAFT_1954 are separated by 93 nucleotidesB158DRAFT_1954 and B158DRAFT_1955 are separated by 12 nucleotidesB158DRAFT_1955 and B158DRAFT_1956 are separated by 97 nucleotides B158DRAFT_1953: B158DRAFT_1953 - GTP-binding protein HflX, at 89,594 to 90,892 _1953 B158DRAFT_1954: B158DRAFT_1954 - protease FtsH subunit HflK, at 90,986 to 92,047 _1954 B158DRAFT_1955: B158DRAFT_1955 - HflC protein, at 92,060 to 92,944 _1955 B158DRAFT_1956: B158DRAFT_1956 - Uncharacterized protein conserved in bacteria, at 93,042 to 93,212 _1956 Position (kb) 90 91 92 93Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2 3at 90.016 kb on - strand, within B158DRAFT_1953at 90.016 kb on - strand, within B158DRAFT_1953at 90.027 kb on - strand, within B158DRAFT_1953at 90.029 kb on + strand, within B158DRAFT_1953at 90.029 kb on + strand, within B158DRAFT_1953at 90.071 kb on + strand, within B158DRAFT_1953at 90.079 kb on - strand, within B158DRAFT_1953at 90.083 kb on - strand, within B158DRAFT_1953at 90.104 kb on - strand, within B158DRAFT_1953at 90.161 kb on + strand, within B158DRAFT_1953at 90.193 kb on + strand, within B158DRAFT_1953at 90.261 kb on + strand, within B158DRAFT_1953at 90.318 kb on + strand, within B158DRAFT_1953at 90.326 kb on - strand, within B158DRAFT_1953at 90.344 kb on - strand, within B158DRAFT_1953at 90.344 kb on - strand, within B158DRAFT_1953at 90.344 kb on - strand, within B158DRAFT_1953at 90.360 kb on + strand, within B158DRAFT_1953at 90.496 kb on + strand, within B158DRAFT_1953at 90.501 kb on + strand, within B158DRAFT_1953at 90.504 kb on - strand, within B158DRAFT_1953at 90.509 kb on - strand, within B158DRAFT_1953at 90.558 kb on + strand, within B158DRAFT_1953at 90.566 kb on - strand, within B158DRAFT_1953at 90.568 kb on + strand, within B158DRAFT_1953at 90.568 kb on + strand, within B158DRAFT_1953at 90.576 kb on - strand, within B158DRAFT_1953at 90.576 kb on - strand, within B158DRAFT_1953at 90.576 kb on - strand, within B158DRAFT_1953at 90.576 kb on - strand, within B158DRAFT_1953at 90.578 kb on + strand, within B158DRAFT_1953at 90.584 kb on - strand, within B158DRAFT_1953at 90.584 kb on - strand, within B158DRAFT_1953at 90.586 kb on - strand, within B158DRAFT_1953at 90.651 kb on + strand, within B158DRAFT_1953at 90.651 kb on + strand, within B158DRAFT_1953at 90.651 kb on + strand, within B158DRAFT_1953at 90.674 kb on + strand, within B158DRAFT_1953at 90.674 kb on + strand, within B158DRAFT_1953at 90.708 kb on - strand, within B158DRAFT_1953at 90.746 kb on + strand, within B158DRAFT_1953at 90.919 kb on - strandat 90.937 kb on - strandat 91.110 kb on - strand, within B158DRAFT_1954at 91.132 kb on + strand, within B158DRAFT_1954at 91.135 kb on - strand, within B158DRAFT_1954at 91.140 kb on - strand, within B158DRAFT_1954at 91.304 kb on - strand, within B158DRAFT_1954at 91.355 kb on + strand, within B158DRAFT_1954at 91.355 kb on + strand, within B158DRAFT_1954at 91.356 kb on + strand, within B158DRAFT_1954at 91.363 kb on - strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.403 kb on + strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.411 kb on - strand, within B158DRAFT_1954at 91.447 kb on + strand, within B158DRAFT_1954at 91.646 kb on - strand, within B158DRAFT_1954at 91.710 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.720 kb on + strand, within B158DRAFT_1954at 91.721 kb on + strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.728 kb on - strand, within B158DRAFT_1954at 91.729 kb on - strand, within B158DRAFT_1954at 91.766 kb on + strand, within B158DRAFT_1954at 91.773 kb on + strand, within B158DRAFT_1954at 91.849 kb on + strand, within B158DRAFT_1954at 91.857 kb on - strand, within B158DRAFT_1954at 91.892 kb on + strand, within B158DRAFT_1954at 92.013 kb on + strandat 92.156 kb on + strand, within B158DRAFT_1955at 92.156 kb on + strand, within B158DRAFT_1955at 92.156 kb on + strand, within B158DRAFT_1955at 92.172 kb on - strand, within B158DRAFT_1955at 92.240 kb on - strand, within B158DRAFT_1955at 92.256 kb on - strand, within B158DRAFT_1955at 92.278 kb on - strand, within B158DRAFT_1955at 92.315 kb on - strand, within B158DRAFT_1955at 92.352 kb on + strand, within B158DRAFT_1955at 92.437 kb on - strand, within B158DRAFT_1955at 92.489 kb on - strand, within B158DRAFT_1955at 92.507 kb on + strand, within B158DRAFT_1955at 92.507 kb on + strand, within B158DRAFT_1955at 92.507 kb on + strand, within B158DRAFT_1955at 92.515 kb on - strand, within B158DRAFT_1955at 92.558 kb on - strand, within B158DRAFT_1955at 92.767 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.841 kb on + strand, within B158DRAFT_1955at 92.849 kb on - strand, within B158DRAFT_1955at 92.849 kb on - strand, within B158DRAFT_1955at 92.849 kb on - strand, within B158DRAFT_1955at 92.849 kb on - strand, within B158DRAFT_1955at 92.991 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
remove
90,016 - B158DRAFT_1953 0.32 -0.4
90,016 - B158DRAFT_1953 0.32 -1.6
90,027 - B158DRAFT_1953 0.33 -1.1
90,029 + B158DRAFT_1953 0.33 -0.2
90,029 + B158DRAFT_1953 0.33 +0.2
90,071 + B158DRAFT_1953 0.37 -2.5
90,079 - B158DRAFT_1953 0.37 -0.6
90,083 - B158DRAFT_1953 0.38 -0.7
90,104 - B158DRAFT_1953 0.39 -0.6
90,161 + B158DRAFT_1953 0.44 -0.3
90,193 + B158DRAFT_1953 0.46 -0.5
90,261 + B158DRAFT_1953 0.51 -0.9
90,318 + B158DRAFT_1953 0.56 -0.1
90,326 - B158DRAFT_1953 0.56 -0.1
90,344 - B158DRAFT_1953 0.58 -0.9
90,344 - B158DRAFT_1953 0.58 -1.4
90,344 - B158DRAFT_1953 0.58 -0.2
90,360 + B158DRAFT_1953 0.59 +0.2
90,496 + B158DRAFT_1953 0.69 -0.9
90,501 + B158DRAFT_1953 0.70 -0.1
90,504 - B158DRAFT_1953 0.70 +0.0
90,509 - B158DRAFT_1953 0.70 +0.5
90,558 + B158DRAFT_1953 0.74 -0.2
90,566 - B158DRAFT_1953 0.75 -0.3
90,568 + B158DRAFT_1953 0.75 +3.2
90,568 + B158DRAFT_1953 0.75 -0.6
90,576 - B158DRAFT_1953 0.76 -0.6
90,576 - B158DRAFT_1953 0.76 -1.9
90,576 - B158DRAFT_1953 0.76 -0.6
90,576 - B158DRAFT_1953 0.76 -0.8
90,578 + B158DRAFT_1953 0.76 +0.5
90,584 - B158DRAFT_1953 0.76 -0.8
90,584 - B158DRAFT_1953 0.76 -1.0
90,586 - B158DRAFT_1953 0.76 -1.8
90,651 + B158DRAFT_1953 0.81 -0.2
90,651 + B158DRAFT_1953 0.81 -0.3
90,651 + B158DRAFT_1953 0.81 -1.6
90,674 + B158DRAFT_1953 0.83 -0.5
90,674 + B158DRAFT_1953 0.83 -1.0
90,708 - B158DRAFT_1953 0.86 -0.7
90,746 + B158DRAFT_1953 0.89 -0.6
90,919 - -5.0
90,937 - -4.2
91,110 - B158DRAFT_1954 0.12 -3.6
91,132 + B158DRAFT_1954 0.14 -2.6
91,135 - B158DRAFT_1954 0.14 -4.2
91,140 - B158DRAFT_1954 0.15 -4.6
91,304 - B158DRAFT_1954 0.30 -4.5
91,355 + B158DRAFT_1954 0.35 -1.3
91,355 + B158DRAFT_1954 0.35 -2.8
91,356 + B158DRAFT_1954 0.35 -4.4
91,363 - B158DRAFT_1954 0.35 -3.3
91,403 + B158DRAFT_1954 0.39 -5.2
91,403 + B158DRAFT_1954 0.39 -3.1
91,403 + B158DRAFT_1954 0.39 -3.0
91,403 + B158DRAFT_1954 0.39 -4.1
91,403 + B158DRAFT_1954 0.39 -4.1
91,403 + B158DRAFT_1954 0.39 -4.4
91,403 + B158DRAFT_1954 0.39 -4.2
91,403 + B158DRAFT_1954 0.39 -3.2
91,403 + B158DRAFT_1954 0.39 -1.1
91,403 + B158DRAFT_1954 0.39 -4.8
91,403 + B158DRAFT_1954 0.39 -4.1
91,403 + B158DRAFT_1954 0.39 -2.6
91,411 - B158DRAFT_1954 0.40 -3.0
91,411 - B158DRAFT_1954 0.40 -4.4
91,411 - B158DRAFT_1954 0.40 -2.4
91,411 - B158DRAFT_1954 0.40 -6.0
91,411 - B158DRAFT_1954 0.40 -2.5
91,411 - B158DRAFT_1954 0.40 -6.7
91,411 - B158DRAFT_1954 0.40 -4.9
91,411 - B158DRAFT_1954 0.40 -5.1
91,447 + B158DRAFT_1954 0.43 -2.9
91,646 - B158DRAFT_1954 0.62 -5.2
91,710 + B158DRAFT_1954 0.68 -3.6
91,720 + B158DRAFT_1954 0.69 -3.6
91,720 + B158DRAFT_1954 0.69 -4.4
91,720 + B158DRAFT_1954 0.69 -3.3
91,720 + B158DRAFT_1954 0.69 -4.5
91,720 + B158DRAFT_1954 0.69 -4.7
91,720 + B158DRAFT_1954 0.69 -5.3
91,721 + B158DRAFT_1954 0.69 -2.7
91,728 - B158DRAFT_1954 0.70 -5.0
91,728 - B158DRAFT_1954 0.70 -4.5
91,728 - B158DRAFT_1954 0.70 -3.4
91,728 - B158DRAFT_1954 0.70 -4.9
91,728 - B158DRAFT_1954 0.70 -4.3
91,728 - B158DRAFT_1954 0.70 -3.2
91,728 - B158DRAFT_1954 0.70 -6.0
91,728 - B158DRAFT_1954 0.70 -5.6
91,728 - B158DRAFT_1954 0.70 -4.8
91,728 - B158DRAFT_1954 0.70 -3.7
91,728 - B158DRAFT_1954 0.70 -3.8
91,728 - B158DRAFT_1954 0.70 -3.0
91,729 - B158DRAFT_1954 0.70 -3.5
91,766 + B158DRAFT_1954 0.73 -4.6
91,773 + B158DRAFT_1954 0.74 -4.1
91,849 + B158DRAFT_1954 0.81 -3.7
91,857 - B158DRAFT_1954 0.82 -4.1
91,892 + B158DRAFT_1954 0.85 -6.1
92,013 + -4.4
92,156 + B158DRAFT_1955 0.11 -2.8
92,156 + B158DRAFT_1955 0.11 -4.6
92,156 + B158DRAFT_1955 0.11 -1.7
92,172 - B158DRAFT_1955 0.13 -3.1
92,240 - B158DRAFT_1955 0.20 -3.7
92,256 - B158DRAFT_1955 0.22 -4.1
92,278 - B158DRAFT_1955 0.25 -2.1
92,315 - B158DRAFT_1955 0.29 -3.6
92,352 + B158DRAFT_1955 0.33 -4.8
92,437 - B158DRAFT_1955 0.43 -3.6
92,489 - B158DRAFT_1955 0.48 -4.9
92,507 + B158DRAFT_1955 0.51 -3.6
92,507 + B158DRAFT_1955 0.51 -4.7
92,507 + B158DRAFT_1955 0.51 -3.1
92,515 - B158DRAFT_1955 0.51 -4.0
92,558 - B158DRAFT_1955 0.56 -2.7
92,767 + B158DRAFT_1955 0.80 -4.5
92,841 + B158DRAFT_1955 0.88 -5.4
92,841 + B158DRAFT_1955 0.88 -4.1
92,841 + B158DRAFT_1955 0.88 -2.4
92,841 + B158DRAFT_1955 0.88 -6.0
92,841 + B158DRAFT_1955 0.88 -5.2
92,841 + B158DRAFT_1955 0.88 -5.4
92,841 + B158DRAFT_1955 0.88 -3.1
92,849 - B158DRAFT_1955 0.89 -4.0
92,849 - B158DRAFT_1955 0.89 -4.5
92,849 - B158DRAFT_1955 0.89 -2.8
92,849 - B158DRAFT_1955 0.89 -3.7
92,991 - -0.3

Or see this region's nucleotide sequence