Experiment: m.b. Bacitracin 1.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1446 and B158DRAFT_1447 are separated by 1 nucleotides B158DRAFT_1447 and B158DRAFT_1448 are separated by 48 nucleotides
B158DRAFT_1446: B158DRAFT_1446 - 4-hydroxyphenylpyruvate dioxygenase, at 1,499,982 to 1,501,043
_1446
B158DRAFT_1447: B158DRAFT_1447 - homogentisate 1,2-dioxygenase (EC 1.13.11.5), at 1,501,045 to 1,502,175
_1447
B158DRAFT_1448: B158DRAFT_1448 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 1,502,224 to 1,503,213
_1448
Position (kb)
1501
1502
1503 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1500.177 kb on - strand, within B158DRAFT_1446 at 1500.187 kb on + strand, within B158DRAFT_1446 at 1500.224 kb on - strand, within B158DRAFT_1446 at 1500.226 kb on + strand, within B158DRAFT_1446 at 1500.233 kb on + strand, within B158DRAFT_1446 at 1500.276 kb on + strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.284 kb on - strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.286 kb on + strand, within B158DRAFT_1446 at 1500.294 kb on - strand, within B158DRAFT_1446 at 1500.323 kb on - strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.351 kb on + strand, within B158DRAFT_1446 at 1500.354 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.359 kb on - strand, within B158DRAFT_1446 at 1500.392 kb on - strand, within B158DRAFT_1446 at 1500.445 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on + strand, within B158DRAFT_1446 at 1500.460 kb on - strand, within B158DRAFT_1446 at 1500.481 kb on + strand, within B158DRAFT_1446 at 1500.488 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on + strand, within B158DRAFT_1446 at 1500.496 kb on - strand, within B158DRAFT_1446 at 1500.504 kb on - strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.579 kb on + strand at 1500.579 kb on + strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.587 kb on - strand, within B158DRAFT_1446 at 1500.593 kb on + strand, within B158DRAFT_1446 at 1500.680 kb on + strand, within B158DRAFT_1446 at 1500.680 kb on + strand, within B158DRAFT_1446 at 1500.686 kb on - strand, within B158DRAFT_1446 at 1500.687 kb on + strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.688 kb on - strand, within B158DRAFT_1446 at 1500.696 kb on + strand, within B158DRAFT_1446 at 1500.696 kb on + strand, within B158DRAFT_1446 at 1500.702 kb on - strand, within B158DRAFT_1446 at 1500.704 kb on - strand, within B158DRAFT_1446 at 1500.778 kb on + strand, within B158DRAFT_1446 at 1500.824 kb on + strand, within B158DRAFT_1446 at 1500.881 kb on - strand, within B158DRAFT_1446 at 1500.931 kb on - strand, within B158DRAFT_1446 at 1500.953 kb on + strand at 1500.961 kb on - strand at 1500.961 kb on - strand at 1500.971 kb on - strand at 1500.994 kb on - strand at 1500.994 kb on - strand at 1501.006 kb on - strand at 1501.023 kb on + strand at 1501.037 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.090 kb on + strand at 1501.095 kb on + strand at 1501.098 kb on - strand at 1501.108 kb on - strand at 1501.139 kb on - strand at 1501.155 kb on + strand at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.260 kb on + strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.268 kb on - strand, within B158DRAFT_1447 at 1501.278 kb on - strand, within B158DRAFT_1447 at 1501.283 kb on + strand, within B158DRAFT_1447 at 1501.291 kb on + strand, within B158DRAFT_1447 at 1501.291 kb on - strand, within B158DRAFT_1447 at 1501.354 kb on - strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.395 kb on + strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.403 kb on - strand, within B158DRAFT_1447 at 1501.405 kb on + strand, within B158DRAFT_1447 at 1501.413 kb on - strand, within B158DRAFT_1447 at 1501.469 kb on + strand, within B158DRAFT_1447 at 1501.609 kb on - strand, within B158DRAFT_1447 at 1501.615 kb on + strand, within B158DRAFT_1447 at 1501.651 kb on - strand, within B158DRAFT_1447 at 1501.801 kb on + strand, within B158DRAFT_1447 at 1501.801 kb on + strand, within B158DRAFT_1447 at 1501.810 kb on + strand, within B158DRAFT_1447 at 1501.876 kb on - strand, within B158DRAFT_1447 at 1501.881 kb on - strand, within B158DRAFT_1447 at 1501.924 kb on - strand, within B158DRAFT_1447 at 1501.986 kb on - strand, within B158DRAFT_1447 at 1502.002 kb on + strand, within B158DRAFT_1447 at 1502.009 kb on + strand, within B158DRAFT_1447 at 1502.030 kb on - strand, within B158DRAFT_1447 at 1502.039 kb on - strand, within B158DRAFT_1447 at 1502.041 kb on + strand, within B158DRAFT_1447 at 1502.041 kb on + strand, within B158DRAFT_1447 at 1502.109 kb on - strand at 1502.110 kb on - strand at 1502.129 kb on + strand at 1502.146 kb on - strand at 1502.153 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml remove 1,500,177 - B158DRAFT_1446 0.18 -2.6 1,500,187 + B158DRAFT_1446 0.19 -1.1 1,500,224 - B158DRAFT_1446 0.23 -1.6 1,500,226 + B158DRAFT_1446 0.23 -1.2 1,500,233 + B158DRAFT_1446 0.24 -0.9 1,500,276 + B158DRAFT_1446 0.28 -1.6 1,500,284 - B158DRAFT_1446 0.28 -1.8 1,500,284 - B158DRAFT_1446 0.28 -1.6 1,500,286 + B158DRAFT_1446 0.29 -2.0 1,500,286 + B158DRAFT_1446 0.29 -1.3 1,500,294 - B158DRAFT_1446 0.29 -1.5 1,500,323 - B158DRAFT_1446 0.32 -2.3 1,500,351 + B158DRAFT_1446 0.35 -0.8 1,500,351 + B158DRAFT_1446 0.35 -0.6 1,500,351 + B158DRAFT_1446 0.35 -0.8 1,500,351 + B158DRAFT_1446 0.35 -0.7 1,500,351 + B158DRAFT_1446 0.35 -1.5 1,500,354 - B158DRAFT_1446 0.35 -1.9 1,500,359 - B158DRAFT_1446 0.35 -1.6 1,500,359 - B158DRAFT_1446 0.35 -2.6 1,500,359 - B158DRAFT_1446 0.35 -1.5 1,500,359 - B158DRAFT_1446 0.35 -3.7 1,500,359 - B158DRAFT_1446 0.35 -0.9 1,500,359 - B158DRAFT_1446 0.35 -1.7 1,500,359 - B158DRAFT_1446 0.35 -1.4 1,500,359 - B158DRAFT_1446 0.35 -2.1 1,500,359 - B158DRAFT_1446 0.35 -1.6 1,500,359 - B158DRAFT_1446 0.35 -1.9 1,500,359 - B158DRAFT_1446 0.35 -1.2 1,500,359 - B158DRAFT_1446 0.35 -2.0 1,500,359 - B158DRAFT_1446 0.35 -1.6 1,500,392 - B158DRAFT_1446 0.39 -2.5 1,500,445 + B158DRAFT_1446 0.44 -0.2 1,500,460 + B158DRAFT_1446 0.45 -1.0 1,500,460 + B158DRAFT_1446 0.45 -1.8 1,500,460 - B158DRAFT_1446 0.45 -1.6 1,500,481 + B158DRAFT_1446 0.47 -0.4 1,500,488 + B158DRAFT_1446 0.48 -1.7 1,500,496 + B158DRAFT_1446 0.48 -0.4 1,500,496 + B158DRAFT_1446 0.48 -1.9 1,500,496 - B158DRAFT_1446 0.48 -1.9 1,500,504 - B158DRAFT_1446 0.49 -3.6 1,500,579 + B158DRAFT_1446 0.56 -0.5 1,500,579 + B158DRAFT_1446 0.56 -0.5 1,500,579 + +0.9 1,500,579 + B158DRAFT_1446 0.56 -0.3 1,500,587 - B158DRAFT_1446 0.57 -0.3 1,500,587 - B158DRAFT_1446 0.57 -1.3 1,500,587 - B158DRAFT_1446 0.57 -1.7 1,500,593 + B158DRAFT_1446 0.58 -0.2 1,500,680 + B158DRAFT_1446 0.66 -1.1 1,500,680 + B158DRAFT_1446 0.66 -0.2 1,500,686 - B158DRAFT_1446 0.66 -1.1 1,500,687 + B158DRAFT_1446 0.66 -0.7 1,500,688 - B158DRAFT_1446 0.66 +0.2 1,500,688 - B158DRAFT_1446 0.66 -0.5 1,500,688 - B158DRAFT_1446 0.66 -0.3 1,500,688 - B158DRAFT_1446 0.66 -0.2 1,500,696 + B158DRAFT_1446 0.67 -0.1 1,500,696 + B158DRAFT_1446 0.67 -0.6 1,500,702 - B158DRAFT_1446 0.68 -2.3 1,500,704 - B158DRAFT_1446 0.68 -0.9 1,500,778 + B158DRAFT_1446 0.75 -1.3 1,500,824 + B158DRAFT_1446 0.79 -0.4 1,500,881 - B158DRAFT_1446 0.85 -2.1 1,500,931 - B158DRAFT_1446 0.89 -2.1 1,500,953 + -0.6 1,500,961 - -2.2 1,500,961 - -1.8 1,500,971 - -0.2 1,500,994 - -1.6 1,500,994 - -1.8 1,501,006 - -1.0 1,501,023 + +0.1 1,501,037 + -1.0 1,501,090 + -0.7 1,501,090 + -0.6 1,501,090 + -1.7 1,501,090 + -0.6 1,501,090 + -0.9 1,501,095 + -1.6 1,501,098 - -2.1 1,501,108 - -2.3 1,501,139 - -3.1 1,501,155 + +0.0 1,501,260 + B158DRAFT_1447 0.19 -0.4 1,501,260 + B158DRAFT_1447 0.19 +0.9 1,501,260 + B158DRAFT_1447 0.19 +0.1 1,501,260 + B158DRAFT_1447 0.19 -0.3 1,501,260 + B158DRAFT_1447 0.19 -0.1 1,501,260 + B158DRAFT_1447 0.19 -0.2 1,501,260 + B158DRAFT_1447 0.19 -0.2 1,501,260 + B158DRAFT_1447 0.19 -0.1 1,501,268 - B158DRAFT_1447 0.20 -2.0 1,501,268 - B158DRAFT_1447 0.20 -2.0 1,501,268 - B158DRAFT_1447 0.20 -3.5 1,501,268 - B158DRAFT_1447 0.20 -4.3 1,501,268 - B158DRAFT_1447 0.20 -1.1 1,501,268 - B158DRAFT_1447 0.20 -1.8 1,501,278 - B158DRAFT_1447 0.21 -1.4 1,501,283 + B158DRAFT_1447 0.21 -1.1 1,501,291 + B158DRAFT_1447 0.22 +0.5 1,501,291 - B158DRAFT_1447 0.22 -1.7 1,501,354 - B158DRAFT_1447 0.27 -2.8 1,501,395 + B158DRAFT_1447 0.31 +0.3 1,501,395 + B158DRAFT_1447 0.31 +0.2 1,501,395 + B158DRAFT_1447 0.31 +0.6 1,501,395 + B158DRAFT_1447 0.31 -0.5 1,501,403 - B158DRAFT_1447 0.32 -1.2 1,501,403 - B158DRAFT_1447 0.32 -3.0 1,501,403 - B158DRAFT_1447 0.32 -3.8 1,501,403 - B158DRAFT_1447 0.32 -0.1 1,501,403 - B158DRAFT_1447 0.32 -2.1 1,501,403 - B158DRAFT_1447 0.32 -3.4 1,501,403 - B158DRAFT_1447 0.32 -1.8 1,501,405 + B158DRAFT_1447 0.32 +0.1 1,501,413 - B158DRAFT_1447 0.33 -3.1 1,501,469 + B158DRAFT_1447 0.37 +0.1 1,501,609 - B158DRAFT_1447 0.50 -2.6 1,501,615 + B158DRAFT_1447 0.50 -0.7 1,501,651 - B158DRAFT_1447 0.54 -1.9 1,501,801 + B158DRAFT_1447 0.67 +0.3 1,501,801 + B158DRAFT_1447 0.67 +1.1 1,501,810 + B158DRAFT_1447 0.68 +0.3 1,501,876 - B158DRAFT_1447 0.73 -3.8 1,501,881 - B158DRAFT_1447 0.74 -2.5 1,501,924 - B158DRAFT_1447 0.78 -1.8 1,501,986 - B158DRAFT_1447 0.83 -1.3 1,502,002 + B158DRAFT_1447 0.85 +0.2 1,502,009 + B158DRAFT_1447 0.85 +1.5 1,502,030 - B158DRAFT_1447 0.87 -2.8 1,502,039 - B158DRAFT_1447 0.88 -3.7 1,502,041 + B158DRAFT_1447 0.88 +0.7 1,502,041 + B158DRAFT_1447 0.88 +0.3 1,502,109 - -2.6 1,502,110 - -2.5 1,502,129 + -0.3 1,502,146 - -2.8 1,502,153 - -0.2
Or see this region's nucleotide sequence