Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1418

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1416 and B158DRAFT_1417 are separated by 7 nucleotidesB158DRAFT_1417 and B158DRAFT_1418 are separated by 66 nucleotidesB158DRAFT_1418 and B158DRAFT_1419 are separated by 174 nucleotides B158DRAFT_1416: B158DRAFT_1416 - GAF domain-containing protein, at 1,462,983 to 1,463,498 _1416 B158DRAFT_1417: B158DRAFT_1417 - Predicted dioxygenase of extradiol dioxygenase family, at 1,463,506 to 1,463,931 _1417 B158DRAFT_1418: B158DRAFT_1418 - Tryptophan 2,3-dioxygenase (vermilion), at 1,463,998 to 1,465,077 _1418 B158DRAFT_1419: B158DRAFT_1419 - citrate synthase (EC 2.3.3.1), at 1,465,252 to 1,466,541 _1419 Position (kb) 1463 1464 1465 1466Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1463.031 kb on + strandat 1463.152 kb on + strand, within B158DRAFT_1416at 1463.152 kb on + strand, within B158DRAFT_1416at 1463.152 kb on + strand, within B158DRAFT_1416at 1463.157 kb on + strand, within B158DRAFT_1416at 1463.160 kb on - strand, within B158DRAFT_1416at 1463.160 kb on - strand, within B158DRAFT_1416at 1463.166 kb on - strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.168 kb on + strand, within B158DRAFT_1416at 1463.176 kb on - strand, within B158DRAFT_1416at 1463.176 kb on - strand, within B158DRAFT_1416at 1463.176 kb on - strand, within B158DRAFT_1416at 1463.176 kb on - strand, within B158DRAFT_1416at 1463.176 kb on - strand, within B158DRAFT_1416at 1463.199 kb on - strand, within B158DRAFT_1416at 1463.208 kb on + strand, within B158DRAFT_1416at 1463.216 kb on - strand, within B158DRAFT_1416at 1463.253 kb on - strand, within B158DRAFT_1416at 1463.345 kb on + strand, within B158DRAFT_1416at 1463.353 kb on - strand, within B158DRAFT_1416at 1463.367 kb on - strand, within B158DRAFT_1416at 1463.389 kb on - strand, within B158DRAFT_1416at 1463.399 kb on - strand, within B158DRAFT_1416at 1463.409 kb on - strand, within B158DRAFT_1416at 1463.432 kb on + strand, within B158DRAFT_1416at 1463.518 kb on - strandat 1463.546 kb on + strandat 1463.546 kb on + strandat 1463.546 kb on + strandat 1463.546 kb on + strandat 1463.554 kb on - strand, within B158DRAFT_1417at 1463.554 kb on - strand, within B158DRAFT_1417at 1463.556 kb on + strand, within B158DRAFT_1417at 1463.564 kb on - strand, within B158DRAFT_1417at 1463.573 kb on - strand, within B158DRAFT_1417at 1463.577 kb on + strand, within B158DRAFT_1417at 1463.604 kb on - strand, within B158DRAFT_1417at 1463.604 kb on - strand, within B158DRAFT_1417at 1463.610 kb on + strand, within B158DRAFT_1417at 1463.610 kb on + strand, within B158DRAFT_1417at 1463.618 kb on - strand, within B158DRAFT_1417at 1463.618 kb on - strand, within B158DRAFT_1417at 1463.664 kb on + strand, within B158DRAFT_1417at 1463.664 kb on + strand, within B158DRAFT_1417at 1463.672 kb on + strand, within B158DRAFT_1417at 1463.672 kb on - strand, within B158DRAFT_1417at 1463.672 kb on - strand, within B158DRAFT_1417at 1463.690 kb on - strand, within B158DRAFT_1417at 1463.690 kb on - strand, within B158DRAFT_1417at 1463.740 kb on + strand, within B158DRAFT_1417at 1463.748 kb on - strand, within B158DRAFT_1417at 1463.748 kb on - strand, within B158DRAFT_1417at 1463.748 kb on - strand, within B158DRAFT_1417at 1463.749 kb on + strand, within B158DRAFT_1417at 1463.763 kb on + strand, within B158DRAFT_1417at 1463.763 kb on + strand, within B158DRAFT_1417at 1463.777 kb on + strand, within B158DRAFT_1417at 1463.777 kb on + strand, within B158DRAFT_1417at 1463.785 kb on + strand, within B158DRAFT_1417at 1463.785 kb on - strand, within B158DRAFT_1417at 1463.785 kb on - strand, within B158DRAFT_1417at 1463.793 kb on - strand, within B158DRAFT_1417at 1463.820 kb on - strand, within B158DRAFT_1417at 1463.830 kb on + strand, within B158DRAFT_1417at 1463.830 kb on + strand, within B158DRAFT_1417at 1463.838 kb on - strand, within B158DRAFT_1417at 1463.842 kb on + strand, within B158DRAFT_1417at 1463.850 kb on - strand, within B158DRAFT_1417at 1463.906 kb on + strandat 1463.914 kb on - strandat 1463.955 kb on + strandat 1463.985 kb on - strandat 1464.100 kb on + strandat 1464.100 kb on + strandat 1464.108 kb on - strand, within B158DRAFT_1418at 1464.108 kb on - strand, within B158DRAFT_1418at 1464.108 kb on - strand, within B158DRAFT_1418at 1464.108 kb on - strand, within B158DRAFT_1418at 1464.124 kb on + strand, within B158DRAFT_1418at 1464.132 kb on + strand, within B158DRAFT_1418at 1464.132 kb on - strand, within B158DRAFT_1418at 1464.132 kb on - strand, within B158DRAFT_1418at 1464.154 kb on - strand, within B158DRAFT_1418at 1464.175 kb on + strand, within B158DRAFT_1418at 1464.185 kb on - strand, within B158DRAFT_1418at 1464.211 kb on - strand, within B158DRAFT_1418at 1464.213 kb on - strand, within B158DRAFT_1418at 1464.221 kb on + strand, within B158DRAFT_1418at 1464.242 kb on + strand, within B158DRAFT_1418at 1464.245 kb on - strand, within B158DRAFT_1418at 1464.254 kb on + strand, within B158DRAFT_1418at 1464.262 kb on - strand, within B158DRAFT_1418at 1464.262 kb on - strand, within B158DRAFT_1418at 1464.264 kb on - strand, within B158DRAFT_1418at 1464.270 kb on + strand, within B158DRAFT_1418at 1464.283 kb on - strand, within B158DRAFT_1418at 1464.301 kb on + strand, within B158DRAFT_1418at 1464.338 kb on + strand, within B158DRAFT_1418at 1464.338 kb on + strand, within B158DRAFT_1418at 1464.346 kb on - strand, within B158DRAFT_1418at 1464.346 kb on - strand, within B158DRAFT_1418at 1464.376 kb on + strand, within B158DRAFT_1418at 1464.489 kb on - strand, within B158DRAFT_1418at 1464.535 kb on - strand, within B158DRAFT_1418at 1464.539 kb on + strand, within B158DRAFT_1418at 1464.580 kb on + strand, within B158DRAFT_1418at 1464.677 kb on + strand, within B158DRAFT_1418at 1464.856 kb on - strand, within B158DRAFT_1418at 1464.915 kb on + strand, within B158DRAFT_1418at 1464.921 kb on + strand, within B158DRAFT_1418at 1464.984 kb on - strandat 1464.986 kb on - strandat 1465.016 kb on - strandat 1465.109 kb on + strandat 1465.109 kb on + strandat 1465.109 kb on + strandat 1465.109 kb on + strandat 1465.142 kb on - strandat 1465.173 kb on + strandat 1465.258 kb on - strandat 1465.284 kb on + strandat 1465.295 kb on + strandat 1465.295 kb on + strandat 1465.295 kb on + strandat 1465.303 kb on - strandat 1465.437 kb on + strand, within B158DRAFT_1419at 1465.440 kb on - strand, within B158DRAFT_1419at 1465.442 kb on + strand, within B158DRAFT_1419at 1465.450 kb on - strand, within B158DRAFT_1419at 1465.450 kb on - strand, within B158DRAFT_1419at 1465.450 kb on - strand, within B158DRAFT_1419at 1465.450 kb on - strand, within B158DRAFT_1419at 1465.450 kb on - strand, within B158DRAFT_1419at 1465.531 kb on - strand, within B158DRAFT_1419at 1465.531 kb on - strand, within B158DRAFT_1419at 1465.558 kb on + strand, within B158DRAFT_1419at 1465.558 kb on + strand, within B158DRAFT_1419at 1465.566 kb on - strand, within B158DRAFT_1419at 1465.566 kb on - strand, within B158DRAFT_1419at 1465.610 kb on - strand, within B158DRAFT_1419at 1465.610 kb on - strand, within B158DRAFT_1419at 1465.694 kb on - strand, within B158DRAFT_1419at 1465.729 kb on + strand, within B158DRAFT_1419at 1465.729 kb on + strand, within B158DRAFT_1419at 1465.737 kb on - strand, within B158DRAFT_1419at 1465.739 kb on + strand, within B158DRAFT_1419at 1465.768 kb on + strand, within B158DRAFT_1419at 1465.768 kb on + strand, within B158DRAFT_1419at 1465.776 kb on - strand, within B158DRAFT_1419at 1465.811 kb on - strand, within B158DRAFT_1419at 1465.879 kb on + strand, within B158DRAFT_1419at 1465.879 kb on + strand, within B158DRAFT_1419at 1465.936 kb on - strand, within B158DRAFT_1419at 1465.970 kb on - strand, within B158DRAFT_1419at 1465.979 kb on + strand, within B158DRAFT_1419at 1466.009 kb on + strand, within B158DRAFT_1419at 1466.017 kb on + strand, within B158DRAFT_1419at 1466.017 kb on - strand, within B158DRAFT_1419

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,463,031 + +0.0
1,463,152 + B158DRAFT_1416 0.33 -0.4
1,463,152 + B158DRAFT_1416 0.33 -0.6
1,463,152 + B158DRAFT_1416 0.33 -0.7
1,463,157 + B158DRAFT_1416 0.34 -0.3
1,463,160 - B158DRAFT_1416 0.34 -0.0
1,463,160 - B158DRAFT_1416 0.34 -0.1
1,463,166 - B158DRAFT_1416 0.35 -0.1
1,463,168 + B158DRAFT_1416 0.36 -0.8
1,463,168 + B158DRAFT_1416 0.36 -0.1
1,463,168 + B158DRAFT_1416 0.36 +0.5
1,463,168 + B158DRAFT_1416 0.36 +0.3
1,463,168 + B158DRAFT_1416 0.36 -0.1
1,463,168 + B158DRAFT_1416 0.36 +0.8
1,463,176 - B158DRAFT_1416 0.37 -0.1
1,463,176 - B158DRAFT_1416 0.37 -0.3
1,463,176 - B158DRAFT_1416 0.37 +0.3
1,463,176 - B158DRAFT_1416 0.37 -0.6
1,463,176 - B158DRAFT_1416 0.37 -0.5
1,463,199 - B158DRAFT_1416 0.42 -0.1
1,463,208 + B158DRAFT_1416 0.44 -0.0
1,463,216 - B158DRAFT_1416 0.45 +0.3
1,463,253 - B158DRAFT_1416 0.52 -0.7
1,463,345 + B158DRAFT_1416 0.70 -0.4
1,463,353 - B158DRAFT_1416 0.72 -0.0
1,463,367 - B158DRAFT_1416 0.74 +0.1
1,463,389 - B158DRAFT_1416 0.79 -1.3
1,463,399 - B158DRAFT_1416 0.81 -0.4
1,463,409 - B158DRAFT_1416 0.83 -0.5
1,463,432 + B158DRAFT_1416 0.87 -0.3
1,463,518 - -0.2
1,463,546 + +0.4
1,463,546 + +0.0
1,463,546 + +0.1
1,463,546 + -0.6
1,463,554 - B158DRAFT_1417 0.11 +0.4
1,463,554 - B158DRAFT_1417 0.11 -0.3
1,463,556 + B158DRAFT_1417 0.12 -1.8
1,463,564 - B158DRAFT_1417 0.14 -0.9
1,463,573 - B158DRAFT_1417 0.16 -0.3
1,463,577 + B158DRAFT_1417 0.17 -0.3
1,463,604 - B158DRAFT_1417 0.23 +0.1
1,463,604 - B158DRAFT_1417 0.23 -0.4
1,463,610 + B158DRAFT_1417 0.24 -0.6
1,463,610 + B158DRAFT_1417 0.24 -0.3
1,463,618 - B158DRAFT_1417 0.26 +0.4
1,463,618 - B158DRAFT_1417 0.26 -0.1
1,463,664 + B158DRAFT_1417 0.37 -0.4
1,463,664 + B158DRAFT_1417 0.37 +0.2
1,463,672 + B158DRAFT_1417 0.39 -0.6
1,463,672 - B158DRAFT_1417 0.39 +0.2
1,463,672 - B158DRAFT_1417 0.39 -0.3
1,463,690 - B158DRAFT_1417 0.43 -0.4
1,463,690 - B158DRAFT_1417 0.43 -0.8
1,463,740 + B158DRAFT_1417 0.55 +0.1
1,463,748 - B158DRAFT_1417 0.57 -0.1
1,463,748 - B158DRAFT_1417 0.57 -0.0
1,463,748 - B158DRAFT_1417 0.57 -0.1
1,463,749 + B158DRAFT_1417 0.57 -0.3
1,463,763 + B158DRAFT_1417 0.60 +0.2
1,463,763 + B158DRAFT_1417 0.60 +0.5
1,463,777 + B158DRAFT_1417 0.64 -0.1
1,463,777 + B158DRAFT_1417 0.64 -0.1
1,463,785 + B158DRAFT_1417 0.65 +0.5
1,463,785 - B158DRAFT_1417 0.65 -0.2
1,463,785 - B158DRAFT_1417 0.65 -0.2
1,463,793 - B158DRAFT_1417 0.67 -0.4
1,463,820 - B158DRAFT_1417 0.74 -0.5
1,463,830 + B158DRAFT_1417 0.76 +0.2
1,463,830 + B158DRAFT_1417 0.76 -0.1
1,463,838 - B158DRAFT_1417 0.78 -0.2
1,463,842 + B158DRAFT_1417 0.79 -1.1
1,463,850 - B158DRAFT_1417 0.81 +1.0
1,463,906 + -0.0
1,463,914 - -0.7
1,463,955 + -0.4
1,463,985 - -0.2
1,464,100 + -0.3
1,464,100 + -0.8
1,464,108 - B158DRAFT_1418 0.10 +0.0
1,464,108 - B158DRAFT_1418 0.10 +0.1
1,464,108 - B158DRAFT_1418 0.10 +2.7
1,464,108 - B158DRAFT_1418 0.10 -0.6
1,464,124 + B158DRAFT_1418 0.12 -0.5
1,464,132 + B158DRAFT_1418 0.12 +0.3
1,464,132 - B158DRAFT_1418 0.12 -0.1
1,464,132 - B158DRAFT_1418 0.12 +0.2
1,464,154 - B158DRAFT_1418 0.14 -0.6
1,464,175 + B158DRAFT_1418 0.16 +0.3
1,464,185 - B158DRAFT_1418 0.17 -0.9
1,464,211 - B158DRAFT_1418 0.20 +0.6
1,464,213 - B158DRAFT_1418 0.20 +0.1
1,464,221 + B158DRAFT_1418 0.21 -0.2
1,464,242 + B158DRAFT_1418 0.23 +0.3
1,464,245 - B158DRAFT_1418 0.23 -0.1
1,464,254 + B158DRAFT_1418 0.24 +0.2
1,464,262 - B158DRAFT_1418 0.24 -0.0
1,464,262 - B158DRAFT_1418 0.24 +0.3
1,464,264 - B158DRAFT_1418 0.25 -0.4
1,464,270 + B158DRAFT_1418 0.25 -0.2
1,464,283 - B158DRAFT_1418 0.26 -0.8
1,464,301 + B158DRAFT_1418 0.28 -0.3
1,464,338 + B158DRAFT_1418 0.31 +0.4
1,464,338 + B158DRAFT_1418 0.31 +0.2
1,464,346 - B158DRAFT_1418 0.32 +0.6
1,464,346 - B158DRAFT_1418 0.32 -0.0
1,464,376 + B158DRAFT_1418 0.35 -0.2
1,464,489 - B158DRAFT_1418 0.45 +0.1
1,464,535 - B158DRAFT_1418 0.50 -0.1
1,464,539 + B158DRAFT_1418 0.50 -0.9
1,464,580 + B158DRAFT_1418 0.54 -0.0
1,464,677 + B158DRAFT_1418 0.63 +0.5
1,464,856 - B158DRAFT_1418 0.79 -0.4
1,464,915 + B158DRAFT_1418 0.85 -0.5
1,464,921 + B158DRAFT_1418 0.85 -0.5
1,464,984 - -0.3
1,464,986 - +0.0
1,465,016 - -0.5
1,465,109 + -0.6
1,465,109 + -0.2
1,465,109 + -0.3
1,465,109 + -0.6
1,465,142 - -1.2
1,465,173 + +0.7
1,465,258 - +0.5
1,465,284 + +2.0
1,465,295 + +1.9
1,465,295 + +1.7
1,465,295 + +2.1
1,465,303 - +3.4
1,465,437 + B158DRAFT_1419 0.14 +2.0
1,465,440 - B158DRAFT_1419 0.15 +1.8
1,465,442 + B158DRAFT_1419 0.15 +2.3
1,465,450 - B158DRAFT_1419 0.15 +2.5
1,465,450 - B158DRAFT_1419 0.15 +2.1
1,465,450 - B158DRAFT_1419 0.15 +1.7
1,465,450 - B158DRAFT_1419 0.15 +2.6
1,465,450 - B158DRAFT_1419 0.15 +1.3
1,465,531 - B158DRAFT_1419 0.22 +2.4
1,465,531 - B158DRAFT_1419 0.22 +1.6
1,465,558 + B158DRAFT_1419 0.24 +1.7
1,465,558 + B158DRAFT_1419 0.24 +1.9
1,465,566 - B158DRAFT_1419 0.24 +2.0
1,465,566 - B158DRAFT_1419 0.24 +1.4
1,465,610 - B158DRAFT_1419 0.28 +2.0
1,465,610 - B158DRAFT_1419 0.28 +1.8
1,465,694 - B158DRAFT_1419 0.34 +1.4
1,465,729 + B158DRAFT_1419 0.37 +1.9
1,465,729 + B158DRAFT_1419 0.37 +2.1
1,465,737 - B158DRAFT_1419 0.38 +2.6
1,465,739 + B158DRAFT_1419 0.38 +2.2
1,465,768 + B158DRAFT_1419 0.40 +2.1
1,465,768 + B158DRAFT_1419 0.40 +1.9
1,465,776 - B158DRAFT_1419 0.41 +2.3
1,465,811 - B158DRAFT_1419 0.43 +2.3
1,465,879 + B158DRAFT_1419 0.49 +2.0
1,465,879 + B158DRAFT_1419 0.49 +2.3
1,465,936 - B158DRAFT_1419 0.53 +2.1
1,465,970 - B158DRAFT_1419 0.56 +2.1
1,465,979 + B158DRAFT_1419 0.56 +1.6
1,466,009 + B158DRAFT_1419 0.59 +2.0
1,466,017 + B158DRAFT_1419 0.59 +1.5
1,466,017 - B158DRAFT_1419 0.59 +2.4

Or see this region's nucleotide sequence