Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1371

Experiment: m.b. Bacitracin 1.5 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1369 and B158DRAFT_1370 are separated by 69 nucleotidesB158DRAFT_1370 and B158DRAFT_1371 are separated by 82 nucleotidesB158DRAFT_1371 and B158DRAFT_1372 are separated by 382 nucleotidesB158DRAFT_1372 and B158DRAFT_1373 overlap by 4 nucleotides B158DRAFT_1369: B158DRAFT_1369 - hypothetical protein, at 1,414,753 to 1,415,049 _1369 B158DRAFT_1370: B158DRAFT_1370 - Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism, at 1,415,119 to 1,415,688 _1370 B158DRAFT_1371: B158DRAFT_1371 - hypothetical protein, at 1,415,771 to 1,416,304 _1371 B158DRAFT_1372: B158DRAFT_1372 - hypothetical protein, at 1,416,687 to 1,417,208 _1372 B158DRAFT_1373: B158DRAFT_1373 - Tetratricopeptide repeat., at 1,417,205 to 1,419,013 _1373 Position (kb) 1415 1416 1417Strain fitness (log2 ratio) -2 -1 0 1 2at 1414.805 kb on - strand, within B158DRAFT_1369at 1414.843 kb on + strand, within B158DRAFT_1369at 1414.921 kb on + strand, within B158DRAFT_1369at 1414.929 kb on - strand, within B158DRAFT_1369at 1414.929 kb on - strand, within B158DRAFT_1369at 1415.012 kb on - strand, within B158DRAFT_1369at 1415.022 kb on - strandat 1415.064 kb on - strandat 1415.110 kb on - strandat 1415.179 kb on + strand, within B158DRAFT_1370at 1415.180 kb on + strand, within B158DRAFT_1370at 1415.197 kb on + strand, within B158DRAFT_1370at 1415.249 kb on + strand, within B158DRAFT_1370at 1415.333 kb on - strand, within B158DRAFT_1370at 1415.386 kb on + strand, within B158DRAFT_1370at 1415.435 kb on + strand, within B158DRAFT_1370at 1415.458 kb on + strand, within B158DRAFT_1370at 1415.466 kb on - strand, within B158DRAFT_1370at 1415.484 kb on + strand, within B158DRAFT_1370at 1415.552 kb on - strand, within B158DRAFT_1370at 1415.577 kb on + strand, within B158DRAFT_1370at 1415.590 kb on - strand, within B158DRAFT_1370at 1415.590 kb on - strand, within B158DRAFT_1370at 1415.614 kb on + strand, within B158DRAFT_1370at 1415.664 kb on + strandat 1415.820 kb on + strandat 1415.820 kb on + strandat 1415.830 kb on + strand, within B158DRAFT_1371at 1415.838 kb on - strand, within B158DRAFT_1371at 1415.838 kb on - strand, within B158DRAFT_1371at 1415.849 kb on - strand, within B158DRAFT_1371at 1415.893 kb on - strand, within B158DRAFT_1371at 1415.977 kb on - strand, within B158DRAFT_1371at 1416.017 kb on + strand, within B158DRAFT_1371at 1416.025 kb on - strand, within B158DRAFT_1371at 1416.025 kb on - strand, within B158DRAFT_1371at 1416.126 kb on - strand, within B158DRAFT_1371at 1416.126 kb on - strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.163 kb on + strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.171 kb on - strand, within B158DRAFT_1371at 1416.182 kb on + strand, within B158DRAFT_1371at 1416.182 kb on + strand, within B158DRAFT_1371at 1416.184 kb on - strand, within B158DRAFT_1371at 1416.252 kb on - strandat 1416.255 kb on - strandat 1416.335 kb on - strandat 1416.335 kb on - strandat 1416.492 kb on - strandat 1416.594 kb on - strandat 1416.631 kb on + strandat 1416.639 kb on - strandat 1416.665 kb on + strandat 1416.681 kb on - strandat 1416.785 kb on + strand, within B158DRAFT_1372at 1416.793 kb on - strand, within B158DRAFT_1372at 1416.814 kb on + strand, within B158DRAFT_1372at 1416.829 kb on + strand, within B158DRAFT_1372at 1416.919 kb on + strand, within B158DRAFT_1372at 1416.931 kb on + strand, within B158DRAFT_1372at 1416.931 kb on + strand, within B158DRAFT_1372at 1416.955 kb on - strand, within B158DRAFT_1372at 1416.974 kb on + strand, within B158DRAFT_1372at 1416.981 kb on - strand, within B158DRAFT_1372at 1417.006 kb on + strand, within B158DRAFT_1372at 1417.035 kb on + strand, within B158DRAFT_1372at 1417.043 kb on - strand, within B158DRAFT_1372at 1417.043 kb on - strand, within B158DRAFT_1372at 1417.043 kb on - strand, within B158DRAFT_1372at 1417.050 kb on + strand, within B158DRAFT_1372at 1417.050 kb on + strand, within B158DRAFT_1372at 1417.051 kb on + strand, within B158DRAFT_1372at 1417.083 kb on + strand, within B158DRAFT_1372at 1417.095 kb on + strand, within B158DRAFT_1372at 1417.100 kb on + strand, within B158DRAFT_1372at 1417.100 kb on + strand, within B158DRAFT_1372at 1417.108 kb on - strand, within B158DRAFT_1372at 1417.108 kb on - strand, within B158DRAFT_1372at 1417.108 kb on - strand, within B158DRAFT_1372at 1417.108 kb on - strand, within B158DRAFT_1372at 1417.108 kb on - strand, within B158DRAFT_1372at 1417.110 kb on + strand, within B158DRAFT_1372at 1417.245 kb on + strandat 1417.245 kb on + strandat 1417.253 kb on - strandat 1417.263 kb on - strandat 1417.263 kb on - strandat 1417.263 kb on - strandat 1417.296 kb on + strandat 1417.296 kb on + strandat 1417.304 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
remove
1,414,805 - B158DRAFT_1369 0.18 +1.5
1,414,843 + B158DRAFT_1369 0.30 +0.7
1,414,921 + B158DRAFT_1369 0.57 +1.0
1,414,929 - B158DRAFT_1369 0.59 +1.3
1,414,929 - B158DRAFT_1369 0.59 +0.5
1,415,012 - B158DRAFT_1369 0.87 +0.8
1,415,022 - -0.2
1,415,064 - +0.2
1,415,110 - -0.2
1,415,179 + B158DRAFT_1370 0.11 +0.0
1,415,180 + B158DRAFT_1370 0.11 -0.1
1,415,197 + B158DRAFT_1370 0.14 +0.0
1,415,249 + B158DRAFT_1370 0.23 -1.4
1,415,333 - B158DRAFT_1370 0.38 +0.1
1,415,386 + B158DRAFT_1370 0.47 -0.2
1,415,435 + B158DRAFT_1370 0.55 -0.4
1,415,458 + B158DRAFT_1370 0.59 -1.9
1,415,466 - B158DRAFT_1370 0.61 -0.0
1,415,484 + B158DRAFT_1370 0.64 +0.1
1,415,552 - B158DRAFT_1370 0.76 +0.9
1,415,577 + B158DRAFT_1370 0.80 -0.9
1,415,590 - B158DRAFT_1370 0.83 -0.4
1,415,590 - B158DRAFT_1370 0.83 -0.2
1,415,614 + B158DRAFT_1370 0.87 -1.2
1,415,664 + +0.5
1,415,820 + -0.4
1,415,820 + +0.4
1,415,830 + B158DRAFT_1371 0.11 +1.9
1,415,838 - B158DRAFT_1371 0.13 -0.3
1,415,838 - B158DRAFT_1371 0.13 -0.9
1,415,849 - B158DRAFT_1371 0.15 -0.9
1,415,893 - B158DRAFT_1371 0.23 +0.2
1,415,977 - B158DRAFT_1371 0.39 -0.1
1,416,017 + B158DRAFT_1371 0.46 -0.4
1,416,025 - B158DRAFT_1371 0.48 -0.1
1,416,025 - B158DRAFT_1371 0.48 -0.9
1,416,126 - B158DRAFT_1371 0.66 -1.0
1,416,126 - B158DRAFT_1371 0.66 +0.2
1,416,163 + B158DRAFT_1371 0.73 -0.2
1,416,163 + B158DRAFT_1371 0.73 -0.8
1,416,163 + B158DRAFT_1371 0.73 -0.2
1,416,163 + B158DRAFT_1371 0.73 +0.3
1,416,163 + B158DRAFT_1371 0.73 -0.7
1,416,163 + B158DRAFT_1371 0.73 -0.3
1,416,163 + B158DRAFT_1371 0.73 -0.2
1,416,163 + B158DRAFT_1371 0.73 -1.1
1,416,163 + B158DRAFT_1371 0.73 -0.2
1,416,163 + B158DRAFT_1371 0.73 -1.9
1,416,163 + B158DRAFT_1371 0.73 -0.7
1,416,163 + B158DRAFT_1371 0.73 -0.1
1,416,163 + B158DRAFT_1371 0.73 +0.1
1,416,163 + B158DRAFT_1371 0.73 -0.3
1,416,163 + B158DRAFT_1371 0.73 -0.3
1,416,163 + B158DRAFT_1371 0.73 -1.5
1,416,171 - B158DRAFT_1371 0.75 -0.7
1,416,171 - B158DRAFT_1371 0.75 +0.4
1,416,171 - B158DRAFT_1371 0.75 -0.1
1,416,171 - B158DRAFT_1371 0.75 -0.3
1,416,171 - B158DRAFT_1371 0.75 -0.6
1,416,171 - B158DRAFT_1371 0.75 -0.1
1,416,171 - B158DRAFT_1371 0.75 -0.4
1,416,182 + B158DRAFT_1371 0.77 +0.0
1,416,182 + B158DRAFT_1371 0.77 -0.6
1,416,184 - B158DRAFT_1371 0.77 -0.2
1,416,252 - +0.0
1,416,255 - -0.7
1,416,335 - -0.5
1,416,335 - -0.3
1,416,492 - -0.2
1,416,594 - -0.2
1,416,631 + -0.2
1,416,639 - -0.1
1,416,665 + -0.2
1,416,681 - -0.1
1,416,785 + B158DRAFT_1372 0.19 +0.3
1,416,793 - B158DRAFT_1372 0.20 -1.2
1,416,814 + B158DRAFT_1372 0.24 -0.0
1,416,829 + B158DRAFT_1372 0.27 -0.3
1,416,919 + B158DRAFT_1372 0.44 -0.4
1,416,931 + B158DRAFT_1372 0.47 -0.9
1,416,931 + B158DRAFT_1372 0.47 +0.3
1,416,955 - B158DRAFT_1372 0.51 -0.0
1,416,974 + B158DRAFT_1372 0.55 +0.7
1,416,981 - B158DRAFT_1372 0.56 -0.0
1,417,006 + B158DRAFT_1372 0.61 -0.1
1,417,035 + B158DRAFT_1372 0.67 +0.2
1,417,043 - B158DRAFT_1372 0.68 +0.3
1,417,043 - B158DRAFT_1372 0.68 -0.4
1,417,043 - B158DRAFT_1372 0.68 -0.0
1,417,050 + B158DRAFT_1372 0.70 -0.4
1,417,050 + B158DRAFT_1372 0.70 +0.4
1,417,051 + B158DRAFT_1372 0.70 -0.4
1,417,083 + B158DRAFT_1372 0.76 -0.7
1,417,095 + B158DRAFT_1372 0.78 -1.0
1,417,100 + B158DRAFT_1372 0.79 +1.2
1,417,100 + B158DRAFT_1372 0.79 +1.0
1,417,108 - B158DRAFT_1372 0.81 -0.3
1,417,108 - B158DRAFT_1372 0.81 -0.8
1,417,108 - B158DRAFT_1372 0.81 -0.7
1,417,108 - B158DRAFT_1372 0.81 +0.3
1,417,108 - B158DRAFT_1372 0.81 +0.2
1,417,110 + B158DRAFT_1372 0.81 -0.4
1,417,245 + +0.6
1,417,245 + -0.1
1,417,253 - -2.0
1,417,263 - -0.5
1,417,263 - +0.6
1,417,263 - -0.8
1,417,296 + -0.3
1,417,296 + +0.3
1,417,304 - -0.0

Or see this region's nucleotide sequence