Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1348

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1347 and B158DRAFT_1348 are separated by 108 nucleotidesB158DRAFT_1348 and B158DRAFT_1349 are separated by 101 nucleotidesB158DRAFT_1349 and B158DRAFT_1350 overlap by 11 nucleotides B158DRAFT_1347: B158DRAFT_1347 - hypothetical protein, at 1,392,442 to 1,393,545 _1347 B158DRAFT_1348: B158DRAFT_1348 - hypothetical protein, at 1,393,654 to 1,394,670 _1348 B158DRAFT_1349: B158DRAFT_1349 - hypothetical protein, at 1,394,772 to 1,395,275 _1349 B158DRAFT_1350: B158DRAFT_1350 - hypothetical protein, at 1,395,265 to 1,395,996 _1350 Position (kb) 1393 1394 1395Strain fitness (log2 ratio) -2 -1 0 1 2at 1392.660 kb on - strand, within B158DRAFT_1347at 1392.726 kb on + strand, within B158DRAFT_1347at 1392.920 kb on + strand, within B158DRAFT_1347at 1392.948 kb on - strand, within B158DRAFT_1347at 1393.063 kb on - strand, within B158DRAFT_1347at 1393.153 kb on - strand, within B158DRAFT_1347at 1393.153 kb on - strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.160 kb on + strand, within B158DRAFT_1347at 1393.168 kb on - strand, within B158DRAFT_1347at 1393.168 kb on - strand, within B158DRAFT_1347at 1393.382 kb on + strand, within B158DRAFT_1347at 1393.404 kb on - strand, within B158DRAFT_1347at 1393.507 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.738 kb on - strandat 1393.745 kb on + strandat 1393.781 kb on + strand, within B158DRAFT_1348at 1393.821 kb on + strand, within B158DRAFT_1348at 1393.994 kb on + strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.999 kb on + strand, within B158DRAFT_1348at 1394.007 kb on + strand, within B158DRAFT_1348at 1394.007 kb on - strand, within B158DRAFT_1348at 1394.008 kb on - strand, within B158DRAFT_1348at 1394.026 kb on + strand, within B158DRAFT_1348at 1394.099 kb on - strand, within B158DRAFT_1348at 1394.276 kb on + strand, within B158DRAFT_1348at 1394.283 kb on - strand, within B158DRAFT_1348at 1394.304 kb on + strand, within B158DRAFT_1348at 1394.310 kb on + strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.331 kb on - strand, within B158DRAFT_1348at 1394.408 kb on + strand, within B158DRAFT_1348at 1394.470 kb on - strand, within B158DRAFT_1348at 1394.556 kb on + strand, within B158DRAFT_1348at 1394.556 kb on + strand, within B158DRAFT_1348at 1394.602 kb on + strandat 1394.604 kb on + strandat 1394.610 kb on - strandat 1394.619 kb on + strandat 1394.624 kb on + strandat 1394.627 kb on - strandat 1394.627 kb on - strandat 1394.735 kb on + strandat 1395.009 kb on + strand, within B158DRAFT_1349at 1395.009 kb on + strand, within B158DRAFT_1349at 1395.016 kb on + strand, within B158DRAFT_1349at 1395.105 kb on - strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.113 kb on + strand, within B158DRAFT_1349at 1395.115 kb on + strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.121 kb on - strand, within B158DRAFT_1349at 1395.123 kb on - strand, within B158DRAFT_1349at 1395.240 kb on - strandat 1395.584 kb on - strand, within B158DRAFT_1350

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,392,660 - B158DRAFT_1347 0.20 +0.3
1,392,726 + B158DRAFT_1347 0.26 +0.5
1,392,920 + B158DRAFT_1347 0.43 -0.3
1,392,948 - B158DRAFT_1347 0.46 +1.5
1,393,063 - B158DRAFT_1347 0.56 -0.7
1,393,153 - B158DRAFT_1347 0.64 -0.7
1,393,153 - B158DRAFT_1347 0.64 -0.8
1,393,155 + B158DRAFT_1347 0.65 -0.4
1,393,155 + B158DRAFT_1347 0.65 -0.3
1,393,155 + B158DRAFT_1347 0.65 -0.4
1,393,160 + B158DRAFT_1347 0.65 -2.0
1,393,168 - B158DRAFT_1347 0.66 -0.6
1,393,168 - B158DRAFT_1347 0.66 -0.4
1,393,382 + B158DRAFT_1347 0.85 -0.0
1,393,404 - B158DRAFT_1347 0.87 -0.3
1,393,507 + +0.3
1,393,728 + +0.3
1,393,728 + -0.2
1,393,728 + -1.5
1,393,728 + +0.3
1,393,728 + -0.6
1,393,728 + -0.2
1,393,728 + -0.4
1,393,728 + +0.2
1,393,728 + +0.8
1,393,728 + -0.1
1,393,728 + -0.5
1,393,736 - +0.4
1,393,736 - +0.3
1,393,736 - +0.3
1,393,736 - -0.9
1,393,736 - -0.3
1,393,736 - -0.3
1,393,736 - -1.0
1,393,736 - -0.1
1,393,736 - -1.0
1,393,736 - +0.1
1,393,738 - -0.9
1,393,745 + +0.3
1,393,781 + B158DRAFT_1348 0.12 +2.2
1,393,821 + B158DRAFT_1348 0.16 -0.3
1,393,994 + B158DRAFT_1348 0.33 -0.9
1,393,997 - B158DRAFT_1348 0.34 -0.3
1,393,997 - B158DRAFT_1348 0.34 +0.2
1,393,997 - B158DRAFT_1348 0.34 -0.5
1,393,997 - B158DRAFT_1348 0.34 -0.3
1,393,999 + B158DRAFT_1348 0.34 -0.1
1,394,007 + B158DRAFT_1348 0.35 -0.2
1,394,007 - B158DRAFT_1348 0.35 -0.2
1,394,008 - B158DRAFT_1348 0.35 -0.1
1,394,026 + B158DRAFT_1348 0.37 +0.9
1,394,099 - B158DRAFT_1348 0.44 -0.1
1,394,276 + B158DRAFT_1348 0.61 +0.3
1,394,283 - B158DRAFT_1348 0.62 -1.3
1,394,304 + B158DRAFT_1348 0.64 +0.5
1,394,310 + B158DRAFT_1348 0.65 +0.2
1,394,318 - B158DRAFT_1348 0.65 -0.3
1,394,318 - B158DRAFT_1348 0.65 -0.6
1,394,318 - B158DRAFT_1348 0.65 -0.1
1,394,331 - B158DRAFT_1348 0.67 -0.0
1,394,408 + B158DRAFT_1348 0.74 -0.7
1,394,470 - B158DRAFT_1348 0.80 +0.3
1,394,556 + B158DRAFT_1348 0.89 -0.4
1,394,556 + B158DRAFT_1348 0.89 +0.3
1,394,602 + +0.2
1,394,604 + -0.5
1,394,610 - -1.0
1,394,619 + -0.1
1,394,624 + -0.5
1,394,627 - +0.3
1,394,627 - +0.1
1,394,735 + -0.2
1,395,009 + B158DRAFT_1349 0.47 +0.4
1,395,009 + B158DRAFT_1349 0.47 +0.5
1,395,016 + B158DRAFT_1349 0.48 -0.3
1,395,105 - B158DRAFT_1349 0.66 -0.6
1,395,113 + B158DRAFT_1349 0.68 -0.3
1,395,113 + B158DRAFT_1349 0.68 +0.5
1,395,113 + B158DRAFT_1349 0.68 -0.9
1,395,113 + B158DRAFT_1349 0.68 -0.5
1,395,115 + B158DRAFT_1349 0.68 -0.1
1,395,121 - B158DRAFT_1349 0.69 -0.2
1,395,121 - B158DRAFT_1349 0.69 +0.0
1,395,121 - B158DRAFT_1349 0.69 -0.5
1,395,123 - B158DRAFT_1349 0.70 -0.1
1,395,240 - -0.1
1,395,584 - B158DRAFT_1350 0.44 -0.4

Or see this region's nucleotide sequence