Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1270

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1269 and B158DRAFT_1270 are separated by 371 nucleotidesB158DRAFT_1270 and B158DRAFT_1271 are separated by 344 nucleotidesB158DRAFT_1271 and B158DRAFT_1272 are separated by 105 nucleotides B158DRAFT_1269: B158DRAFT_1269 - Type III restriction enzyme, res subunit., at 1,308,035 to 1,311,379 _1269 B158DRAFT_1270: B158DRAFT_1270 - Outer membrane receptor proteins, mostly Fe transport, at 1,311,751 to 1,313,817 _1270 B158DRAFT_1271: B158DRAFT_1271 - hypothetical protein, at 1,314,162 to 1,314,695 _1271 B158DRAFT_1272: B158DRAFT_1272 - two component transcriptional regulator, LuxR family, at 1,314,801 to 1,315,439 _1272 Position (kb) 1311 1312 1313 1314Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1310.807 kb on + strand, within B158DRAFT_1269at 1310.970 kb on - strand, within B158DRAFT_1269at 1310.970 kb on - strand, within B158DRAFT_1269at 1310.973 kb on + strand, within B158DRAFT_1269at 1310.987 kb on + strand, within B158DRAFT_1269at 1311.043 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.044 kb on + strand, within B158DRAFT_1269at 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.052 kb on - strandat 1311.111 kb on - strandat 1311.113 kb on + strandat 1311.121 kb on - strandat 1311.121 kb on - strandat 1311.121 kb on - strandat 1311.232 kb on - strandat 1311.507 kb on + strandat 1311.552 kb on + strandat 1311.804 kb on + strandat 1311.812 kb on - strandat 1311.834 kb on + strandat 1311.857 kb on - strandat 1311.864 kb on + strandat 1311.931 kb on - strandat 1311.959 kb on + strand, within B158DRAFT_1270at 1311.992 kb on + strand, within B158DRAFT_1270at 1312.045 kb on - strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.087 kb on + strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.095 kb on - strand, within B158DRAFT_1270at 1312.112 kb on + strand, within B158DRAFT_1270at 1312.120 kb on - strand, within B158DRAFT_1270at 1312.200 kb on - strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.211 kb on + strand, within B158DRAFT_1270at 1312.219 kb on - strand, within B158DRAFT_1270at 1312.219 kb on - strand, within B158DRAFT_1270at 1312.237 kb on + strand, within B158DRAFT_1270at 1312.245 kb on - strand, within B158DRAFT_1270at 1312.275 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.363 kb on + strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.371 kb on - strand, within B158DRAFT_1270at 1312.388 kb on - strand, within B158DRAFT_1270at 1312.411 kb on + strand, within B158DRAFT_1270at 1312.419 kb on - strand, within B158DRAFT_1270at 1312.423 kb on + strand, within B158DRAFT_1270at 1312.424 kb on - strand, within B158DRAFT_1270at 1312.546 kb on - strand, within B158DRAFT_1270at 1312.557 kb on + strand, within B158DRAFT_1270at 1312.584 kb on + strand, within B158DRAFT_1270at 1312.627 kb on - strand, within B158DRAFT_1270at 1312.664 kb on - strand, within B158DRAFT_1270at 1312.690 kb on - strand, within B158DRAFT_1270at 1312.690 kb on - strand, within B158DRAFT_1270at 1312.702 kb on - strand, within B158DRAFT_1270at 1312.708 kb on + strand, within B158DRAFT_1270at 1312.708 kb on + strand, within B158DRAFT_1270at 1312.726 kb on - strand, within B158DRAFT_1270at 1312.832 kb on + strand, within B158DRAFT_1270at 1312.874 kb on + strand, within B158DRAFT_1270at 1312.882 kb on - strand, within B158DRAFT_1270at 1312.895 kb on - strand, within B158DRAFT_1270at 1312.899 kb on - strand, within B158DRAFT_1270at 1312.924 kb on - strand, within B158DRAFT_1270at 1312.938 kb on + strand, within B158DRAFT_1270at 1312.970 kb on + strand, within B158DRAFT_1270at 1312.978 kb on - strand, within B158DRAFT_1270at 1313.038 kb on - strand, within B158DRAFT_1270at 1313.101 kb on - strand, within B158DRAFT_1270at 1313.210 kb on + strand, within B158DRAFT_1270at 1313.231 kb on + strand, within B158DRAFT_1270at 1313.231 kb on + strand, within B158DRAFT_1270at 1313.265 kb on + strand, within B158DRAFT_1270at 1313.265 kb on + strand, within B158DRAFT_1270at 1313.273 kb on - strand, within B158DRAFT_1270at 1313.309 kb on + strand, within B158DRAFT_1270at 1313.344 kb on - strand, within B158DRAFT_1270at 1313.357 kb on + strand, within B158DRAFT_1270at 1313.363 kb on - strand, within B158DRAFT_1270at 1313.379 kb on - strand, within B158DRAFT_1270at 1313.441 kb on + strand, within B158DRAFT_1270at 1313.441 kb on + strand, within B158DRAFT_1270at 1313.526 kb on - strand, within B158DRAFT_1270at 1313.559 kb on + strand, within B158DRAFT_1270at 1313.559 kb on + strand, within B158DRAFT_1270at 1313.559 kb on + strand, within B158DRAFT_1270at 1313.559 kb on + strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.567 kb on - strand, within B158DRAFT_1270at 1313.623 kb on + strandat 1313.631 kb on - strandat 1313.724 kb on + strandat 1313.726 kb on - strandat 1313.753 kb on + strandat 1313.798 kb on + strandat 1313.861 kb on + strandat 1313.861 kb on + strandat 1313.861 kb on + strandat 1313.861 kb on + strandat 1313.866 kb on + strandat 1313.866 kb on + strandat 1313.866 kb on + strandat 1313.866 kb on + strandat 1313.866 kb on + strandat 1313.867 kb on + strandat 1313.874 kb on - strandat 1313.874 kb on - strandat 1313.875 kb on - strandat 1313.930 kb on - strandat 1314.025 kb on + strandat 1314.025 kb on + strandat 1314.090 kb on + strandat 1314.090 kb on + strandat 1314.137 kb on + strandat 1314.139 kb on - strandat 1314.199 kb on - strandat 1314.222 kb on - strand, within B158DRAFT_1271at 1314.225 kb on + strand, within B158DRAFT_1271at 1314.231 kb on + strand, within B158DRAFT_1271at 1314.368 kb on + strand, within B158DRAFT_1271at 1314.405 kb on - strand, within B158DRAFT_1271at 1314.481 kb on + strand, within B158DRAFT_1271at 1314.485 kb on + strand, within B158DRAFT_1271at 1314.529 kb on + strand, within B158DRAFT_1271at 1314.535 kb on + strand, within B158DRAFT_1271at 1314.553 kb on - strand, within B158DRAFT_1271at 1314.569 kb on + strand, within B158DRAFT_1271at 1314.577 kb on - strand, within B158DRAFT_1271at 1314.625 kb on + strand, within B158DRAFT_1271at 1314.637 kb on + strand, within B158DRAFT_1271at 1314.712 kb on - strandat 1314.721 kb on - strandat 1314.792 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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1,310,807 + B158DRAFT_1269 0.83 -0.1
1,310,970 - B158DRAFT_1269 0.88 +0.1
1,310,970 - B158DRAFT_1269 0.88 -0.1
1,310,973 + B158DRAFT_1269 0.88 -1.1
1,310,987 + B158DRAFT_1269 0.88 +0.2
1,311,043 + B158DRAFT_1269 0.90 -0.3
1,311,044 + B158DRAFT_1269 0.90 -0.2
1,311,044 + B158DRAFT_1269 0.90 -1.2
1,311,044 + B158DRAFT_1269 0.90 -0.3
1,311,052 - +0.2
1,311,052 - -0.4
1,311,052 - +0.0
1,311,052 - -2.5
1,311,111 - +0.5
1,311,113 + -0.2
1,311,121 - +0.6
1,311,121 - +0.4
1,311,121 - -0.3
1,311,232 - -0.3
1,311,507 + -0.7
1,311,552 + -0.4
1,311,804 + +1.1
1,311,812 - +0.4
1,311,834 + +1.6
1,311,857 - +1.0
1,311,864 + +1.2
1,311,931 - +0.9
1,311,959 + B158DRAFT_1270 0.10 -0.3
1,311,992 + B158DRAFT_1270 0.12 +0.2
1,312,045 - B158DRAFT_1270 0.14 +1.2
1,312,087 + B158DRAFT_1270 0.16 +0.2
1,312,087 + B158DRAFT_1270 0.16 -0.5
1,312,087 + B158DRAFT_1270 0.16 +0.8
1,312,087 + B158DRAFT_1270 0.16 +0.7
1,312,087 + B158DRAFT_1270 0.16 +0.9
1,312,087 + B158DRAFT_1270 0.16 +0.6
1,312,087 + B158DRAFT_1270 0.16 +0.8
1,312,087 + B158DRAFT_1270 0.16 +1.1
1,312,087 + B158DRAFT_1270 0.16 +0.9
1,312,095 - B158DRAFT_1270 0.17 +2.2
1,312,095 - B158DRAFT_1270 0.17 +0.9
1,312,095 - B158DRAFT_1270 0.17 +0.9
1,312,095 - B158DRAFT_1270 0.17 +0.5
1,312,095 - B158DRAFT_1270 0.17 +1.1
1,312,095 - B158DRAFT_1270 0.17 +0.6
1,312,095 - B158DRAFT_1270 0.17 +0.7
1,312,095 - B158DRAFT_1270 0.17 +1.0
1,312,095 - B158DRAFT_1270 0.17 +0.7
1,312,095 - B158DRAFT_1270 0.17 +1.2
1,312,095 - B158DRAFT_1270 0.17 +0.5
1,312,112 + B158DRAFT_1270 0.17 +0.7
1,312,120 - B158DRAFT_1270 0.18 +0.4
1,312,200 - B158DRAFT_1270 0.22 +0.7
1,312,211 + B158DRAFT_1270 0.22 +0.7
1,312,211 + B158DRAFT_1270 0.22 +0.0
1,312,211 + B158DRAFT_1270 0.22 +0.7
1,312,211 + B158DRAFT_1270 0.22 +0.7
1,312,211 + B158DRAFT_1270 0.22 +0.8
1,312,211 + B158DRAFT_1270 0.22 +0.4
1,312,211 + B158DRAFT_1270 0.22 +0.7
1,312,211 + B158DRAFT_1270 0.22 +1.1
1,312,211 + B158DRAFT_1270 0.22 +0.4
1,312,219 - B158DRAFT_1270 0.23 +0.4
1,312,219 - B158DRAFT_1270 0.23 -0.0
1,312,237 + B158DRAFT_1270 0.24 +1.0
1,312,245 - B158DRAFT_1270 0.24 +0.5
1,312,275 + B158DRAFT_1270 0.25 +0.2
1,312,363 + B158DRAFT_1270 0.30 +0.8
1,312,363 + B158DRAFT_1270 0.30 +0.8
1,312,363 + B158DRAFT_1270 0.30 +0.9
1,312,363 + B158DRAFT_1270 0.30 +1.0
1,312,363 + B158DRAFT_1270 0.30 +1.5
1,312,371 - B158DRAFT_1270 0.30 +0.3
1,312,371 - B158DRAFT_1270 0.30 +0.4
1,312,371 - B158DRAFT_1270 0.30 +0.6
1,312,371 - B158DRAFT_1270 0.30 +0.6
1,312,371 - B158DRAFT_1270 0.30 +0.4
1,312,371 - B158DRAFT_1270 0.30 -0.4
1,312,371 - B158DRAFT_1270 0.30 +1.8
1,312,371 - B158DRAFT_1270 0.30 +0.4
1,312,388 - B158DRAFT_1270 0.31 +1.2
1,312,411 + B158DRAFT_1270 0.32 +0.6
1,312,419 - B158DRAFT_1270 0.32 +1.1
1,312,423 + B158DRAFT_1270 0.33 +0.2
1,312,424 - B158DRAFT_1270 0.33 +0.9
1,312,546 - B158DRAFT_1270 0.38 +1.2
1,312,557 + B158DRAFT_1270 0.39 +0.7
1,312,584 + B158DRAFT_1270 0.40 +1.6
1,312,627 - B158DRAFT_1270 0.42 +1.1
1,312,664 - B158DRAFT_1270 0.44 -2.1
1,312,690 - B158DRAFT_1270 0.45 +0.5
1,312,690 - B158DRAFT_1270 0.45 +1.2
1,312,702 - B158DRAFT_1270 0.46 +1.0
1,312,708 + B158DRAFT_1270 0.46 +0.2
1,312,708 + B158DRAFT_1270 0.46 +0.8
1,312,726 - B158DRAFT_1270 0.47 +0.2
1,312,832 + B158DRAFT_1270 0.52 +0.3
1,312,874 + B158DRAFT_1270 0.54 +0.5
1,312,882 - B158DRAFT_1270 0.55 +0.8
1,312,895 - B158DRAFT_1270 0.55 -0.2
1,312,899 - B158DRAFT_1270 0.56 -0.2
1,312,924 - B158DRAFT_1270 0.57 +0.5
1,312,938 + B158DRAFT_1270 0.57 +0.4
1,312,970 + B158DRAFT_1270 0.59 +0.9
1,312,978 - B158DRAFT_1270 0.59 +0.7
1,313,038 - B158DRAFT_1270 0.62 +0.5
1,313,101 - B158DRAFT_1270 0.65 +0.6
1,313,210 + B158DRAFT_1270 0.71 +0.6
1,313,231 + B158DRAFT_1270 0.72 +0.2
1,313,231 + B158DRAFT_1270 0.72 +0.5
1,313,265 + B158DRAFT_1270 0.73 -0.3
1,313,265 + B158DRAFT_1270 0.73 -0.6
1,313,273 - B158DRAFT_1270 0.74 +0.9
1,313,309 + B158DRAFT_1270 0.75 -0.4
1,313,344 - B158DRAFT_1270 0.77 +0.9
1,313,357 + B158DRAFT_1270 0.78 +0.7
1,313,363 - B158DRAFT_1270 0.78 -0.1
1,313,379 - B158DRAFT_1270 0.79 +1.0
1,313,441 + B158DRAFT_1270 0.82 +0.7
1,313,441 + B158DRAFT_1270 0.82 +0.9
1,313,526 - B158DRAFT_1270 0.86 -0.7
1,313,559 + B158DRAFT_1270 0.87 -1.1
1,313,559 + B158DRAFT_1270 0.87 +0.1
1,313,559 + B158DRAFT_1270 0.87 -0.7
1,313,559 + B158DRAFT_1270 0.87 -0.0
1,313,567 - B158DRAFT_1270 0.88 -0.6
1,313,567 - B158DRAFT_1270 0.88 -0.6
1,313,567 - B158DRAFT_1270 0.88 +0.2
1,313,567 - B158DRAFT_1270 0.88 +0.4
1,313,567 - B158DRAFT_1270 0.88 +0.9
1,313,567 - B158DRAFT_1270 0.88 +0.4
1,313,567 - B158DRAFT_1270 0.88 -0.1
1,313,567 - B158DRAFT_1270 0.88 +0.4
1,313,567 - B158DRAFT_1270 0.88 +0.4
1,313,567 - B158DRAFT_1270 0.88 -0.5
1,313,567 - B158DRAFT_1270 0.88 -0.2
1,313,623 + -1.1
1,313,631 - -0.0
1,313,724 + -0.6
1,313,726 - +0.2
1,313,753 + -2.0
1,313,798 + +0.0
1,313,861 + +0.7
1,313,861 + +0.2
1,313,861 + +0.5
1,313,861 + +0.9
1,313,866 + +0.1
1,313,866 + -0.5
1,313,866 + +0.3
1,313,866 + +0.2
1,313,866 + -0.1
1,313,867 + +0.8
1,313,874 - -0.2
1,313,874 - -0.1
1,313,875 - -0.3
1,313,930 - +0.1
1,314,025 + -0.2
1,314,025 + -0.5
1,314,090 + +0.2
1,314,090 + -0.4
1,314,137 + -0.6
1,314,139 - +0.6
1,314,199 - -0.7
1,314,222 - B158DRAFT_1271 0.11 -0.4
1,314,225 + B158DRAFT_1271 0.12 +0.1
1,314,231 + B158DRAFT_1271 0.13 +0.2
1,314,368 + B158DRAFT_1271 0.39 +2.8
1,314,405 - B158DRAFT_1271 0.46 -0.7
1,314,481 + B158DRAFT_1271 0.60 -0.1
1,314,485 + B158DRAFT_1271 0.60 -0.3
1,314,529 + B158DRAFT_1271 0.69 -0.0
1,314,535 + B158DRAFT_1271 0.70 +0.1
1,314,553 - B158DRAFT_1271 0.73 -0.3
1,314,569 + B158DRAFT_1271 0.76 -0.4
1,314,577 - B158DRAFT_1271 0.78 +0.2
1,314,625 + B158DRAFT_1271 0.87 +0.4
1,314,637 + B158DRAFT_1271 0.89 +0.1
1,314,712 - +0.2
1,314,721 - -0.2
1,314,792 - -1.9

Or see this region's nucleotide sequence