Experiment: m.b. Bacitracin 1.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1123 and B158DRAFT_1124 are separated by 550 nucleotides B158DRAFT_1124 and B158DRAFT_1125 overlap by 4 nucleotides B158DRAFT_1125 and B158DRAFT_1126 are separated by 5 nucleotides
B158DRAFT_1123: B158DRAFT_1123 - DNA-binding regulatory protein, YebC/PmpR family, at 1,163,185 to 1,163,928
_1123
B158DRAFT_1124: B158DRAFT_1124 - Holliday junction endonuclease RuvC (EC 3.1.22.4), at 1,164,479 to 1,165,009
_1124
B158DRAFT_1125: B158DRAFT_1125 - Holliday junction DNA helicase subunit RuvA, at 1,165,006 to 1,165,623
_1125
B158DRAFT_1126: B158DRAFT_1126 - FOG: TPR repeat, SEL1 subfamily, at 1,165,629 to 1,167,098
_1126
Position (kb)
1164
1165
1166 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1163.550 kb on - strand, within B158DRAFT_1123 at 1163.748 kb on - strand, within B158DRAFT_1123 at 1163.801 kb on + strand, within B158DRAFT_1123 at 1164.101 kb on + strand at 1164.158 kb on + strand at 1164.158 kb on + strand at 1164.166 kb on - strand at 1164.176 kb on - strand at 1164.176 kb on - strand at 1164.176 kb on - strand at 1164.272 kb on - strand at 1164.412 kb on - strand at 1164.512 kb on + strand at 1164.512 kb on + strand at 1164.585 kb on + strand, within B158DRAFT_1124 at 1164.593 kb on - strand, within B158DRAFT_1124 at 1164.593 kb on - strand, within B158DRAFT_1124 at 1164.603 kb on - strand, within B158DRAFT_1124 at 1164.615 kb on + strand, within B158DRAFT_1124 at 1164.664 kb on + strand, within B158DRAFT_1124 at 1164.730 kb on - strand, within B158DRAFT_1124 at 1164.734 kb on + strand, within B158DRAFT_1124 at 1164.747 kb on - strand, within B158DRAFT_1124 at 1164.770 kb on + strand, within B158DRAFT_1124 at 1164.832 kb on + strand, within B158DRAFT_1124 at 1164.918 kb on - strand, within B158DRAFT_1124 at 1164.929 kb on + strand, within B158DRAFT_1124 at 1164.929 kb on + strand, within B158DRAFT_1124 at 1164.937 kb on - strand, within B158DRAFT_1124 at 1164.958 kb on - strand at 1164.959 kb on - strand at 1164.967 kb on + strand at 1164.967 kb on + strand at 1164.967 kb on + strand at 1164.967 kb on + strand at 1164.967 kb on + strand at 1164.975 kb on - strand at 1164.975 kb on - strand at 1164.975 kb on - strand at 1164.983 kb on - strand at 1165.068 kb on - strand, within B158DRAFT_1125 at 1165.070 kb on + strand, within B158DRAFT_1125 at 1165.117 kb on - strand, within B158DRAFT_1125 at 1165.161 kb on - strand, within B158DRAFT_1125 at 1165.186 kb on + strand, within B158DRAFT_1125 at 1165.210 kb on - strand, within B158DRAFT_1125 at 1165.252 kb on + strand, within B158DRAFT_1125 at 1165.260 kb on - strand, within B158DRAFT_1125 at 1165.261 kb on - strand, within B158DRAFT_1125 at 1165.289 kb on + strand, within B158DRAFT_1125 at 1165.401 kb on + strand, within B158DRAFT_1125 at 1165.429 kb on + strand, within B158DRAFT_1125 at 1165.484 kb on + strand, within B158DRAFT_1125 at 1165.561 kb on + strand, within B158DRAFT_1125 at 1165.585 kb on + strand at 1165.623 kb on + strand at 1165.623 kb on + strand at 1165.623 kb on + strand at 1165.626 kb on - strand at 1165.631 kb on - strand at 1165.631 kb on - strand at 1165.631 kb on - strand at 1165.661 kb on - strand at 1165.670 kb on - strand at 1165.775 kb on - strand at 1165.793 kb on + strand, within B158DRAFT_1126 at 1165.877 kb on - strand, within B158DRAFT_1126 at 1165.922 kb on - strand, within B158DRAFT_1126 at 1165.922 kb on - strand, within B158DRAFT_1126 at 1165.974 kb on + strand, within B158DRAFT_1126 at 1165.983 kb on + strand, within B158DRAFT_1126 at 1165.989 kb on - strand, within B158DRAFT_1126
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml remove 1,163,550 - B158DRAFT_1123 0.49 +0.5 1,163,748 - B158DRAFT_1123 0.76 -0.3 1,163,801 + B158DRAFT_1123 0.83 +0.8 1,164,101 + -0.1 1,164,158 + -0.1 1,164,158 + -0.1 1,164,166 - -0.2 1,164,176 - +0.5 1,164,176 - -0.1 1,164,176 - +0.1 1,164,272 - -0.1 1,164,412 - +1.7 1,164,512 + -1.6 1,164,512 + -3.7 1,164,585 + B158DRAFT_1124 0.20 +0.4 1,164,593 - B158DRAFT_1124 0.21 -2.2 1,164,593 - B158DRAFT_1124 0.21 -2.1 1,164,603 - B158DRAFT_1124 0.23 -1.7 1,164,615 + B158DRAFT_1124 0.26 -2.3 1,164,664 + B158DRAFT_1124 0.35 -3.0 1,164,730 - B158DRAFT_1124 0.47 -2.2 1,164,734 + B158DRAFT_1124 0.48 -1.2 1,164,747 - B158DRAFT_1124 0.50 -2.5 1,164,770 + B158DRAFT_1124 0.55 -2.3 1,164,832 + B158DRAFT_1124 0.66 -1.8 1,164,918 - B158DRAFT_1124 0.83 +1.0 1,164,929 + B158DRAFT_1124 0.85 -2.3 1,164,929 + B158DRAFT_1124 0.85 -2.2 1,164,937 - B158DRAFT_1124 0.86 -2.6 1,164,958 - -2.3 1,164,959 - -1.8 1,164,967 + -0.1 1,164,967 + -1.2 1,164,967 + -0.0 1,164,967 + -0.8 1,164,967 + +0.4 1,164,975 - -2.5 1,164,975 - -0.5 1,164,975 - -2.6 1,164,983 - -3.0 1,165,068 - B158DRAFT_1125 0.10 -3.5 1,165,070 + B158DRAFT_1125 0.10 -3.2 1,165,117 - B158DRAFT_1125 0.18 -1.3 1,165,161 - B158DRAFT_1125 0.25 -2.5 1,165,186 + B158DRAFT_1125 0.29 -1.6 1,165,210 - B158DRAFT_1125 0.33 -1.7 1,165,252 + B158DRAFT_1125 0.40 -1.8 1,165,260 - B158DRAFT_1125 0.41 -1.6 1,165,261 - B158DRAFT_1125 0.41 -4.4 1,165,289 + B158DRAFT_1125 0.46 -2.1 1,165,401 + B158DRAFT_1125 0.64 -0.0 1,165,429 + B158DRAFT_1125 0.68 -0.9 1,165,484 + B158DRAFT_1125 0.77 -0.7 1,165,561 + B158DRAFT_1125 0.90 -3.0 1,165,585 + -1.6 1,165,623 + -0.9 1,165,623 + -0.3 1,165,623 + -0.8 1,165,626 - -1.3 1,165,631 - -0.7 1,165,631 - -0.9 1,165,631 - -0.4 1,165,661 - -0.9 1,165,670 - -0.9 1,165,775 - -1.8 1,165,793 + B158DRAFT_1126 0.11 -0.9 1,165,877 - B158DRAFT_1126 0.17 -0.6 1,165,922 - B158DRAFT_1126 0.20 -1.7 1,165,922 - B158DRAFT_1126 0.20 -1.8 1,165,974 + B158DRAFT_1126 0.23 -0.0 1,165,983 + B158DRAFT_1126 0.24 -2.5 1,165,989 - B158DRAFT_1126 0.24 -0.4
Or see this region's nucleotide sequence