Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0465

Experiment: m.b. Bacitracin 1.5 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0463 and B158DRAFT_0464 are separated by 199 nucleotidesB158DRAFT_0464 and B158DRAFT_0465 are separated by 40 nucleotidesB158DRAFT_0465 and B158DRAFT_0466 are separated by 95 nucleotidesB158DRAFT_0466 and B158DRAFT_0467 overlap by 8 nucleotides B158DRAFT_0463: B158DRAFT_0463 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 464,958 to 467,390 _0463 B158DRAFT_0464: B158DRAFT_0464 - Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily, at 467,590 to 468,126 _0464 B158DRAFT_0465: B158DRAFT_0465 - Putative salt-induced outer membrane protein, at 468,167 to 468,901 _0465 B158DRAFT_0466: B158DRAFT_0466 - RmlD substrate binding domain., at 468,997 to 469,791 _0466 B158DRAFT_0467: B158DRAFT_0467 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 469,784 to 470,332 _0467 Position (kb) 468 469Strain fitness (log2 ratio) -3 -2 -1 0 1at 467.191 kb on + strandat 467.191 kb on - strandat 467.211 kb on + strandat 467.219 kb on - strandat 467.219 kb on - strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.240 kb on + strandat 467.255 kb on - strandat 467.255 kb on - strandat 467.255 kb on - strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.266 kb on + strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.274 kb on - strandat 467.298 kb on - strandat 467.316 kb on + strandat 467.316 kb on + strandat 467.316 kb on + strandat 467.324 kb on - strandat 467.324 kb on - strandat 467.385 kb on - strandat 467.408 kb on + strandat 467.417 kb on + strandat 467.449 kb on + strandat 467.538 kb on - strandat 467.542 kb on + strandat 467.550 kb on - strandat 467.550 kb on - strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.552 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 467.578 kb on + strandat 468.093 kb on + strandat 468.229 kb on + strandat 468.317 kb on - strand, within B158DRAFT_0465at 468.442 kb on + strand, within B158DRAFT_0465at 468.455 kb on + strand, within B158DRAFT_0465at 468.579 kb on - strand, within B158DRAFT_0465at 468.620 kb on - strand, within B158DRAFT_0465at 468.629 kb on + strand, within B158DRAFT_0465at 468.629 kb on + strand, within B158DRAFT_0465at 468.630 kb on + strand, within B158DRAFT_0465at 468.638 kb on - strand, within B158DRAFT_0465at 468.638 kb on - strand, within B158DRAFT_0465at 468.743 kb on - strand, within B158DRAFT_0465at 468.750 kb on + strand, within B158DRAFT_0465at 468.750 kb on + strand, within B158DRAFT_0465at 468.758 kb on - strand, within B158DRAFT_0465at 468.765 kb on + strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.781 kb on - strand, within B158DRAFT_0465at 468.797 kb on + strand, within B158DRAFT_0465at 468.798 kb on + strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.805 kb on - strand, within B158DRAFT_0465at 468.842 kb on + strandat 469.107 kb on - strand, within B158DRAFT_0466at 469.141 kb on - strand, within B158DRAFT_0466at 469.141 kb on - strand, within B158DRAFT_0466at 469.194 kb on + strand, within B158DRAFT_0466at 469.250 kb on + strand, within B158DRAFT_0466at 469.264 kb on + strand, within B158DRAFT_0466at 469.277 kb on - strand, within B158DRAFT_0466at 469.277 kb on - strand, within B158DRAFT_0466at 469.277 kb on - strand, within B158DRAFT_0466at 469.303 kb on + strand, within B158DRAFT_0466at 469.308 kb on + strand, within B158DRAFT_0466at 469.310 kb on + strand, within B158DRAFT_0466at 469.310 kb on + strand, within B158DRAFT_0466at 469.316 kb on - strand, within B158DRAFT_0466at 469.316 kb on - strand, within B158DRAFT_0466at 469.336 kb on - strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.376 kb on + strand, within B158DRAFT_0466at 469.384 kb on - strand, within B158DRAFT_0466at 469.415 kb on + strand, within B158DRAFT_0466at 469.415 kb on + strand, within B158DRAFT_0466at 469.423 kb on - strand, within B158DRAFT_0466at 469.423 kb on - strand, within B158DRAFT_0466at 469.423 kb on - strand, within B158DRAFT_0466at 469.454 kb on + strand, within B158DRAFT_0466at 469.462 kb on - strand, within B158DRAFT_0466at 469.466 kb on - strand, within B158DRAFT_0466at 469.540 kb on + strand, within B158DRAFT_0466at 469.575 kb on + strand, within B158DRAFT_0466at 469.575 kb on + strand, within B158DRAFT_0466at 469.676 kb on + strand, within B158DRAFT_0466at 469.676 kb on + strand, within B158DRAFT_0466at 469.676 kb on + strand, within B158DRAFT_0466at 469.676 kb on + strand, within B158DRAFT_0466at 469.684 kb on - strand, within B158DRAFT_0466at 469.684 kb on - strand, within B158DRAFT_0466at 469.703 kb on - strand, within B158DRAFT_0466at 469.703 kb on - strand, within B158DRAFT_0466at 469.703 kb on - strand, within B158DRAFT_0466at 469.703 kb on - strand, within B158DRAFT_0466at 469.705 kb on + strand, within B158DRAFT_0466at 469.757 kb on - strandat 469.794 kb on + strandat 469.825 kb on - strandat 469.875 kb on + strand, within B158DRAFT_0467at 469.883 kb on - strand, within B158DRAFT_0467at 469.883 kb on - strand, within B158DRAFT_0467at 469.885 kb on + strand, within B158DRAFT_0467at 469.888 kb on + strand, within B158DRAFT_0467

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
remove
467,191 + +0.6
467,191 - -0.0
467,211 + -0.1
467,219 - -0.1
467,219 - -0.5
467,240 + -0.4
467,240 + -0.0
467,240 + -0.0
467,240 + +0.9
467,255 - -0.0
467,255 - -0.0
467,255 - -0.4
467,266 + -0.1
467,266 + -0.2
467,266 + -0.4
467,266 + -0.1
467,266 + +0.5
467,266 + +1.0
467,266 + +0.2
467,274 - +0.1
467,274 - -0.5
467,274 - +0.1
467,274 - -0.1
467,274 - -0.3
467,274 - -0.5
467,274 - -0.2
467,274 - -1.1
467,274 - -0.4
467,274 - +0.2
467,298 - +0.7
467,316 + -0.4
467,316 + -0.1
467,316 + -0.3
467,324 - -0.5
467,324 - -0.4
467,385 - +0.1
467,408 + +1.0
467,417 + -0.5
467,449 + +0.4
467,538 - -0.4
467,542 + +1.2
467,550 - +0.5
467,550 - +1.1
467,552 + -0.2
467,552 + -0.4
467,552 + -1.0
467,552 + +0.2
467,552 + -1.0
467,578 + -0.2
467,578 + +0.8
467,578 + -0.2
467,578 + -0.1
468,093 + -0.3
468,229 + +0.1
468,317 - B158DRAFT_0465 0.20 -0.3
468,442 + B158DRAFT_0465 0.37 +0.6
468,455 + B158DRAFT_0465 0.39 -0.1
468,579 - B158DRAFT_0465 0.56 +0.5
468,620 - B158DRAFT_0465 0.62 +0.5
468,629 + B158DRAFT_0465 0.63 -0.7
468,629 + B158DRAFT_0465 0.63 +1.0
468,630 + B158DRAFT_0465 0.63 +0.7
468,638 - B158DRAFT_0465 0.64 +0.5
468,638 - B158DRAFT_0465 0.64 +0.1
468,743 - B158DRAFT_0465 0.78 +0.3
468,750 + B158DRAFT_0465 0.79 +1.2
468,750 + B158DRAFT_0465 0.79 +0.7
468,758 - B158DRAFT_0465 0.80 +0.1
468,765 + B158DRAFT_0465 0.81 +0.7
468,781 - B158DRAFT_0465 0.84 +0.7
468,781 - B158DRAFT_0465 0.84 +0.5
468,781 - B158DRAFT_0465 0.84 +0.8
468,797 + B158DRAFT_0465 0.86 +0.8
468,798 + B158DRAFT_0465 0.86 +0.6
468,805 - B158DRAFT_0465 0.87 +0.8
468,805 - B158DRAFT_0465 0.87 +0.1
468,805 - B158DRAFT_0465 0.87 +0.9
468,842 + +1.0
469,107 - B158DRAFT_0466 0.14 -0.2
469,141 - B158DRAFT_0466 0.18 +0.6
469,141 - B158DRAFT_0466 0.18 -0.0
469,194 + B158DRAFT_0466 0.25 -1.3
469,250 + B158DRAFT_0466 0.32 +0.1
469,264 + B158DRAFT_0466 0.34 -0.0
469,277 - B158DRAFT_0466 0.35 -0.1
469,277 - B158DRAFT_0466 0.35 +0.3
469,277 - B158DRAFT_0466 0.35 +0.7
469,303 + B158DRAFT_0466 0.38 +0.5
469,308 + B158DRAFT_0466 0.39 +0.0
469,310 + B158DRAFT_0466 0.39 +0.8
469,310 + B158DRAFT_0466 0.39 -0.5
469,316 - B158DRAFT_0466 0.40 -0.2
469,316 - B158DRAFT_0466 0.40 +0.2
469,336 - B158DRAFT_0466 0.43 +0.1
469,376 + B158DRAFT_0466 0.48 +0.0
469,376 + B158DRAFT_0466 0.48 -0.1
469,376 + B158DRAFT_0466 0.48 -0.0
469,376 + B158DRAFT_0466 0.48 +0.6
469,376 + B158DRAFT_0466 0.48 -0.1
469,376 + B158DRAFT_0466 0.48 -0.2
469,384 - B158DRAFT_0466 0.49 -0.5
469,415 + B158DRAFT_0466 0.53 -0.1
469,415 + B158DRAFT_0466 0.53 -0.1
469,423 - B158DRAFT_0466 0.54 -0.6
469,423 - B158DRAFT_0466 0.54 -0.5
469,423 - B158DRAFT_0466 0.54 -0.5
469,454 + B158DRAFT_0466 0.57 -0.1
469,462 - B158DRAFT_0466 0.58 -0.6
469,466 - B158DRAFT_0466 0.59 -0.0
469,540 + B158DRAFT_0466 0.68 -0.6
469,575 + B158DRAFT_0466 0.73 -0.8
469,575 + B158DRAFT_0466 0.73 -0.1
469,676 + B158DRAFT_0466 0.85 -0.5
469,676 + B158DRAFT_0466 0.85 +0.8
469,676 + B158DRAFT_0466 0.85 -0.9
469,676 + B158DRAFT_0466 0.85 -0.6
469,684 - B158DRAFT_0466 0.86 -0.5
469,684 - B158DRAFT_0466 0.86 -0.8
469,703 - B158DRAFT_0466 0.89 -0.8
469,703 - B158DRAFT_0466 0.89 -0.0
469,703 - B158DRAFT_0466 0.89 -0.6
469,703 - B158DRAFT_0466 0.89 -0.3
469,705 + B158DRAFT_0466 0.89 +0.7
469,757 - -1.5
469,794 + -0.3
469,825 - -3.4
469,875 + B158DRAFT_0467 0.17 -3.2
469,883 - B158DRAFT_0467 0.18 -1.8
469,883 - B158DRAFT_0467 0.18 -3.7
469,885 + B158DRAFT_0467 0.18 -3.1
469,888 + B158DRAFT_0467 0.19 -2.8

Or see this region's nucleotide sequence