Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0424

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0422 and B158DRAFT_0423 overlap by 14 nucleotidesB158DRAFT_0423 and B158DRAFT_0424 overlap by 16 nucleotidesB158DRAFT_0424 and B158DRAFT_0425 overlap by 8 nucleotides B158DRAFT_0422: B158DRAFT_0422 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 425,087 to 426,280 _0422 B158DRAFT_0423: B158DRAFT_0423 - Protein of unknown function (DUF3261)., at 426,267 to 426,851 _0423 B158DRAFT_0424: B158DRAFT_0424 - Dehydrogenases (flavoproteins), at 426,836 to 428,092 _0424 B158DRAFT_0425: B158DRAFT_0425 - Predicted exporter, at 428,085 to 430,421 _0425 Position (kb) 426 427 428 429Strain fitness (log2 ratio) -2 -1 0 1at 425.838 kb on - strand, within B158DRAFT_0422at 425.838 kb on - strand, within B158DRAFT_0422at 425.838 kb on - strand, within B158DRAFT_0422at 425.838 kb on - strand, within B158DRAFT_0422at 425.843 kb on - strand, within B158DRAFT_0422at 425.859 kb on + strand, within B158DRAFT_0422at 425.930 kb on + strand, within B158DRAFT_0422at 425.931 kb on + strand, within B158DRAFT_0422at 425.938 kb on - strand, within B158DRAFT_0422at 425.938 kb on - strand, within B158DRAFT_0422at 425.950 kb on + strand, within B158DRAFT_0422at 425.958 kb on - strand, within B158DRAFT_0422at 425.989 kb on + strand, within B158DRAFT_0422at 425.989 kb on + strand, within B158DRAFT_0422at 425.989 kb on + strand, within B158DRAFT_0422at 425.997 kb on - strand, within B158DRAFT_0422at 425.997 kb on - strand, within B158DRAFT_0422at 425.997 kb on - strand, within B158DRAFT_0422at 425.997 kb on - strand, within B158DRAFT_0422at 426.012 kb on + strand, within B158DRAFT_0422at 426.012 kb on + strand, within B158DRAFT_0422at 426.020 kb on - strand, within B158DRAFT_0422at 426.020 kb on - strand, within B158DRAFT_0422at 426.077 kb on - strand, within B158DRAFT_0422at 426.169 kb on + strandat 426.169 kb on + strandat 426.172 kb on - strandat 426.209 kb on + strandat 426.227 kb on - strandat 426.227 kb on - strandat 426.239 kb on + strandat 426.298 kb on + strandat 426.306 kb on - strandat 426.368 kb on - strand, within B158DRAFT_0423at 426.370 kb on + strand, within B158DRAFT_0423at 426.402 kb on - strand, within B158DRAFT_0423at 426.419 kb on + strand, within B158DRAFT_0423at 426.441 kb on + strand, within B158DRAFT_0423at 426.493 kb on - strand, within B158DRAFT_0423at 426.569 kb on - strand, within B158DRAFT_0423at 426.569 kb on - strand, within B158DRAFT_0423at 426.569 kb on - strand, within B158DRAFT_0423at 426.569 kb on - strand, within B158DRAFT_0423at 426.605 kb on - strand, within B158DRAFT_0423at 426.608 kb on + strand, within B158DRAFT_0423at 426.689 kb on + strand, within B158DRAFT_0423at 426.689 kb on + strand, within B158DRAFT_0423at 426.791 kb on + strand, within B158DRAFT_0423at 426.854 kb on - strandat 426.854 kb on - strandat 426.858 kb on + strandat 426.906 kb on - strandat 426.906 kb on - strandat 426.906 kb on - strandat 426.928 kb on + strandat 426.928 kb on + strandat 426.931 kb on - strandat 426.933 kb on + strandat 426.941 kb on - strandat 426.948 kb on - strandat 427.031 kb on + strand, within B158DRAFT_0424at 427.051 kb on - strand, within B158DRAFT_0424at 427.128 kb on + strand, within B158DRAFT_0424at 427.136 kb on - strand, within B158DRAFT_0424at 427.142 kb on + strand, within B158DRAFT_0424at 427.144 kb on - strand, within B158DRAFT_0424at 427.195 kb on + strand, within B158DRAFT_0424at 427.209 kb on + strand, within B158DRAFT_0424at 427.242 kb on + strand, within B158DRAFT_0424at 427.242 kb on + strand, within B158DRAFT_0424at 427.247 kb on - strand, within B158DRAFT_0424at 427.265 kb on - strand, within B158DRAFT_0424at 427.275 kb on + strand, within B158DRAFT_0424at 427.277 kb on + strand, within B158DRAFT_0424at 427.284 kb on - strand, within B158DRAFT_0424at 427.314 kb on + strand, within B158DRAFT_0424at 427.314 kb on + strand, within B158DRAFT_0424at 427.314 kb on + strand, within B158DRAFT_0424at 427.314 kb on - strand, within B158DRAFT_0424at 427.314 kb on - strand, within B158DRAFT_0424at 427.360 kb on - strand, within B158DRAFT_0424at 427.386 kb on - strand, within B158DRAFT_0424at 427.396 kb on - strand, within B158DRAFT_0424at 427.527 kb on - strand, within B158DRAFT_0424at 427.527 kb on - strand, within B158DRAFT_0424at 427.527 kb on - strand, within B158DRAFT_0424at 427.567 kb on - strand, within B158DRAFT_0424at 427.571 kb on + strand, within B158DRAFT_0424at 427.579 kb on - strand, within B158DRAFT_0424at 427.579 kb on - strand, within B158DRAFT_0424at 427.692 kb on - strand, within B158DRAFT_0424at 427.708 kb on + strand, within B158DRAFT_0424at 427.761 kb on + strand, within B158DRAFT_0424at 427.769 kb on - strand, within B158DRAFT_0424at 427.776 kb on + strand, within B158DRAFT_0424at 427.826 kb on + strand, within B158DRAFT_0424at 427.834 kb on - strand, within B158DRAFT_0424at 427.873 kb on + strand, within B158DRAFT_0424at 427.945 kb on + strand, within B158DRAFT_0424at 427.953 kb on - strand, within B158DRAFT_0424at 427.953 kb on - strand, within B158DRAFT_0424at 427.995 kb on + strandat 428.005 kb on + strandat 428.013 kb on - strandat 428.019 kb on - strandat 428.035 kb on - strandat 428.110 kb on + strandat 428.172 kb on + strandat 428.185 kb on - strandat 428.185 kb on - strandat 428.248 kb on + strandat 428.296 kb on + strandat 428.296 kb on + strandat 428.296 kb on + strandat 428.296 kb on + strandat 428.296 kb on + strandat 428.301 kb on + strandat 428.304 kb on - strandat 428.304 kb on - strandat 428.304 kb on - strandat 428.304 kb on - strandat 428.304 kb on - strandat 428.345 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.350 kb on + strand, within B158DRAFT_0425at 428.358 kb on - strand, within B158DRAFT_0425at 428.358 kb on - strand, within B158DRAFT_0425at 428.358 kb on - strand, within B158DRAFT_0425at 428.358 kb on - strand, within B158DRAFT_0425at 428.358 kb on - strand, within B158DRAFT_0425at 428.360 kb on + strand, within B158DRAFT_0425at 428.360 kb on + strand, within B158DRAFT_0425at 428.360 kb on + strand, within B158DRAFT_0425at 428.360 kb on + strand, within B158DRAFT_0425at 428.368 kb on - strand, within B158DRAFT_0425at 428.368 kb on - strand, within B158DRAFT_0425at 428.375 kb on + strand, within B158DRAFT_0425at 428.375 kb on + strand, within B158DRAFT_0425at 428.383 kb on - strand, within B158DRAFT_0425at 428.402 kb on - strand, within B158DRAFT_0425at 428.410 kb on + strand, within B158DRAFT_0425at 428.418 kb on - strand, within B158DRAFT_0425at 428.524 kb on - strand, within B158DRAFT_0425at 428.527 kb on + strand, within B158DRAFT_0425at 428.527 kb on + strand, within B158DRAFT_0425at 428.568 kb on + strand, within B158DRAFT_0425at 428.678 kb on - strand, within B158DRAFT_0425at 428.744 kb on + strand, within B158DRAFT_0425at 428.760 kb on - strand, within B158DRAFT_0425at 428.781 kb on + strand, within B158DRAFT_0425at 428.871 kb on + strand, within B158DRAFT_0425at 428.879 kb on - strand, within B158DRAFT_0425at 428.888 kb on - strand, within B158DRAFT_0425at 428.888 kb on - strand, within B158DRAFT_0425at 428.951 kb on + strand, within B158DRAFT_0425at 428.951 kb on + strand, within B158DRAFT_0425at 428.951 kb on + strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.959 kb on - strand, within B158DRAFT_0425at 428.972 kb on + strand, within B158DRAFT_0425at 429.062 kb on + strand, within B158DRAFT_0425at 429.062 kb on + strand, within B158DRAFT_0425at 429.067 kb on + strand, within B158DRAFT_0425at 429.067 kb on + strand, within B158DRAFT_0425at 429.081 kb on - strand, within B158DRAFT_0425

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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425,838 - B158DRAFT_0422 0.63 -0.1
425,838 - B158DRAFT_0422 0.63 -0.0
425,838 - B158DRAFT_0422 0.63 -1.0
425,838 - B158DRAFT_0422 0.63 -0.4
425,843 - B158DRAFT_0422 0.63 -1.1
425,859 + B158DRAFT_0422 0.65 -0.4
425,930 + B158DRAFT_0422 0.71 -0.1
425,931 + B158DRAFT_0422 0.71 +0.2
425,938 - B158DRAFT_0422 0.71 -0.0
425,938 - B158DRAFT_0422 0.71 -0.1
425,950 + B158DRAFT_0422 0.72 -0.6
425,958 - B158DRAFT_0422 0.73 -0.6
425,989 + B158DRAFT_0422 0.76 -0.5
425,989 + B158DRAFT_0422 0.76 -0.4
425,989 + B158DRAFT_0422 0.76 -0.0
425,997 - B158DRAFT_0422 0.76 +0.1
425,997 - B158DRAFT_0422 0.76 -0.3
425,997 - B158DRAFT_0422 0.76 -0.1
425,997 - B158DRAFT_0422 0.76 -0.6
426,012 + B158DRAFT_0422 0.77 -0.7
426,012 + B158DRAFT_0422 0.77 +0.8
426,020 - B158DRAFT_0422 0.78 -0.3
426,020 - B158DRAFT_0422 0.78 -0.7
426,077 - B158DRAFT_0422 0.83 +0.5
426,169 + -0.6
426,169 + -0.6
426,172 - -0.2
426,209 + -0.6
426,227 - -0.3
426,227 - -0.4
426,239 + -0.1
426,298 + +0.2
426,306 - +0.6
426,368 - B158DRAFT_0423 0.17 -1.1
426,370 + B158DRAFT_0423 0.18 -0.6
426,402 - B158DRAFT_0423 0.23 -1.1
426,419 + B158DRAFT_0423 0.26 -0.2
426,441 + B158DRAFT_0423 0.30 +0.1
426,493 - B158DRAFT_0423 0.39 -0.6
426,569 - B158DRAFT_0423 0.52 -0.5
426,569 - B158DRAFT_0423 0.52 -1.9
426,569 - B158DRAFT_0423 0.52 -1.2
426,569 - B158DRAFT_0423 0.52 -1.9
426,605 - B158DRAFT_0423 0.58 -1.2
426,608 + B158DRAFT_0423 0.58 -0.8
426,689 + B158DRAFT_0423 0.72 -2.0
426,689 + B158DRAFT_0423 0.72 -0.1
426,791 + B158DRAFT_0423 0.90 -0.1
426,854 - +0.4
426,854 - -0.2
426,858 + -0.4
426,906 - +0.2
426,906 - -0.2
426,906 - -0.3
426,928 + -0.9
426,928 + -0.7
426,931 - -0.6
426,933 + +0.4
426,941 - +0.4
426,948 - +0.2
427,031 + B158DRAFT_0424 0.16 -0.4
427,051 - B158DRAFT_0424 0.17 -0.6
427,128 + B158DRAFT_0424 0.23 -0.8
427,136 - B158DRAFT_0424 0.24 -0.1
427,142 + B158DRAFT_0424 0.24 +0.2
427,144 - B158DRAFT_0424 0.25 +0.7
427,195 + B158DRAFT_0424 0.29 -0.8
427,209 + B158DRAFT_0424 0.30 +0.0
427,242 + B158DRAFT_0424 0.32 -0.6
427,242 + B158DRAFT_0424 0.32 -0.3
427,247 - B158DRAFT_0424 0.33 +0.3
427,265 - B158DRAFT_0424 0.34 +0.2
427,275 + B158DRAFT_0424 0.35 -0.5
427,277 + B158DRAFT_0424 0.35 -0.3
427,284 - B158DRAFT_0424 0.36 +0.6
427,314 + B158DRAFT_0424 0.38 -0.4
427,314 + B158DRAFT_0424 0.38 +0.2
427,314 + B158DRAFT_0424 0.38 -0.6
427,314 - B158DRAFT_0424 0.38 -1.6
427,314 - B158DRAFT_0424 0.38 -0.9
427,360 - B158DRAFT_0424 0.42 +0.3
427,386 - B158DRAFT_0424 0.44 +0.7
427,396 - B158DRAFT_0424 0.45 -0.2
427,527 - B158DRAFT_0424 0.55 -0.7
427,527 - B158DRAFT_0424 0.55 -0.7
427,527 - B158DRAFT_0424 0.55 -0.0
427,567 - B158DRAFT_0424 0.58 -1.2
427,571 + B158DRAFT_0424 0.58 -0.2
427,579 - B158DRAFT_0424 0.59 -0.7
427,579 - B158DRAFT_0424 0.59 +0.4
427,692 - B158DRAFT_0424 0.68 -0.9
427,708 + B158DRAFT_0424 0.69 -0.4
427,761 + B158DRAFT_0424 0.74 -0.1
427,769 - B158DRAFT_0424 0.74 +0.6
427,776 + B158DRAFT_0424 0.75 -1.5
427,826 + B158DRAFT_0424 0.79 -0.8
427,834 - B158DRAFT_0424 0.79 -0.8
427,873 + B158DRAFT_0424 0.82 -0.0
427,945 + B158DRAFT_0424 0.88 -1.1
427,953 - B158DRAFT_0424 0.89 -0.6
427,953 - B158DRAFT_0424 0.89 +0.6
427,995 + -0.6
428,005 + -0.2
428,013 - -0.4
428,019 - -0.8
428,035 - +0.3
428,110 + +0.2
428,172 + -0.8
428,185 - -0.7
428,185 - -1.0
428,248 + -0.2
428,296 + -0.3
428,296 + -0.8
428,296 + -2.0
428,296 + +0.9
428,296 + -0.3
428,301 + -0.0
428,304 - -0.5
428,304 - +0.1
428,304 - -0.4
428,304 - -0.9
428,304 - -1.2
428,345 + B158DRAFT_0425 0.11 -0.3
428,350 + B158DRAFT_0425 0.11 -0.4
428,350 + B158DRAFT_0425 0.11 -0.7
428,350 + B158DRAFT_0425 0.11 +0.8
428,350 + B158DRAFT_0425 0.11 -0.4
428,350 + B158DRAFT_0425 0.11 -0.3
428,350 + B158DRAFT_0425 0.11 -1.0
428,358 - B158DRAFT_0425 0.12 -0.2
428,358 - B158DRAFT_0425 0.12 -0.5
428,358 - B158DRAFT_0425 0.12 +0.7
428,358 - B158DRAFT_0425 0.12 -0.4
428,358 - B158DRAFT_0425 0.12 +0.7
428,360 + B158DRAFT_0425 0.12 +0.5
428,360 + B158DRAFT_0425 0.12 +0.0
428,360 + B158DRAFT_0425 0.12 -0.6
428,360 + B158DRAFT_0425 0.12 -0.8
428,368 - B158DRAFT_0425 0.12 -1.5
428,368 - B158DRAFT_0425 0.12 -0.1
428,375 + B158DRAFT_0425 0.12 -0.5
428,375 + B158DRAFT_0425 0.12 -1.1
428,383 - B158DRAFT_0425 0.13 -0.4
428,402 - B158DRAFT_0425 0.14 -0.2
428,410 + B158DRAFT_0425 0.14 -1.5
428,418 - B158DRAFT_0425 0.14 -0.6
428,524 - B158DRAFT_0425 0.19 -1.6
428,527 + B158DRAFT_0425 0.19 -0.0
428,527 + B158DRAFT_0425 0.19 -0.9
428,568 + B158DRAFT_0425 0.21 -1.4
428,678 - B158DRAFT_0425 0.25 -0.8
428,744 + B158DRAFT_0425 0.28 -0.9
428,760 - B158DRAFT_0425 0.29 -1.4
428,781 + B158DRAFT_0425 0.30 -0.6
428,871 + B158DRAFT_0425 0.34 -0.5
428,879 - B158DRAFT_0425 0.34 -1.3
428,888 - B158DRAFT_0425 0.34 -2.1
428,888 - B158DRAFT_0425 0.34 -1.4
428,951 + B158DRAFT_0425 0.37 -0.3
428,951 + B158DRAFT_0425 0.37 -0.2
428,951 + B158DRAFT_0425 0.37 -0.1
428,959 - B158DRAFT_0425 0.37 -0.4
428,959 - B158DRAFT_0425 0.37 -0.8
428,959 - B158DRAFT_0425 0.37 -0.6
428,959 - B158DRAFT_0425 0.37 -0.8
428,959 - B158DRAFT_0425 0.37 -0.9
428,959 - B158DRAFT_0425 0.37 -0.6
428,959 - B158DRAFT_0425 0.37 -0.3
428,972 + B158DRAFT_0425 0.38 -0.4
429,062 + B158DRAFT_0425 0.42 -0.9
429,062 + B158DRAFT_0425 0.42 -0.3
429,067 + B158DRAFT_0425 0.42 -0.6
429,067 + B158DRAFT_0425 0.42 -0.4
429,081 - B158DRAFT_0425 0.43 -0.3

Or see this region's nucleotide sequence