Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0070

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0068 and B158DRAFT_0069 are separated by 17 nucleotidesB158DRAFT_0069 and B158DRAFT_0070 are separated by 129 nucleotidesB158DRAFT_0070 and B158DRAFT_0071 are separated by 75 nucleotidesB158DRAFT_0071 and B158DRAFT_0072 are separated by 186 nucleotides B158DRAFT_0068: B158DRAFT_0068 - Putative threonine efflux protein, at 65,725 to 66,372 _0068 B158DRAFT_0069: B158DRAFT_0069 - Uncharacterized membrane-associated protein, at 66,390 to 67,151 _0069 B158DRAFT_0070: B158DRAFT_0070 - hypothetical protein, at 67,281 to 67,727 _0070 B158DRAFT_0071: B158DRAFT_0071 - hypothetical protein, at 67,803 to 68,372 _0071 B158DRAFT_0072: B158DRAFT_0072 - Peptidase family M48., at 68,559 to 69,359 _0072 Position (kb) 67 68Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 66.425 kb on - strandat 66.524 kb on + strand, within B158DRAFT_0069at 66.529 kb on + strand, within B158DRAFT_0069at 66.599 kb on + strand, within B158DRAFT_0069at 66.609 kb on + strand, within B158DRAFT_0069at 66.615 kb on - strand, within B158DRAFT_0069at 66.619 kb on + strand, within B158DRAFT_0069at 66.627 kb on - strand, within B158DRAFT_0069at 66.642 kb on + strand, within B158DRAFT_0069at 66.655 kb on - strand, within B158DRAFT_0069at 66.655 kb on - strand, within B158DRAFT_0069at 66.689 kb on - strand, within B158DRAFT_0069at 66.749 kb on - strand, within B158DRAFT_0069at 66.749 kb on - strand, within B158DRAFT_0069at 66.836 kb on + strand, within B158DRAFT_0069at 66.842 kb on - strand, within B158DRAFT_0069at 66.922 kb on + strand, within B158DRAFT_0069at 66.930 kb on - strand, within B158DRAFT_0069at 66.995 kb on + strand, within B158DRAFT_0069at 67.037 kb on + strand, within B158DRAFT_0069at 67.045 kb on - strand, within B158DRAFT_0069at 67.045 kb on - strand, within B158DRAFT_0069at 67.080 kb on + strandat 67.100 kb on + strandat 67.100 kb on + strandat 67.207 kb on - strandat 67.209 kb on + strandat 67.278 kb on + strandat 67.283 kb on + strandat 67.283 kb on + strandat 67.286 kb on - strandat 67.286 kb on - strandat 67.286 kb on - strandat 67.288 kb on + strandat 67.355 kb on - strand, within B158DRAFT_0070at 67.554 kb on + strand, within B158DRAFT_0070at 67.582 kb on - strand, within B158DRAFT_0070at 67.614 kb on + strand, within B158DRAFT_0070at 67.638 kb on + strand, within B158DRAFT_0070at 67.643 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.648 kb on + strand, within B158DRAFT_0070at 67.649 kb on - strand, within B158DRAFT_0070at 67.651 kb on - strand, within B158DRAFT_0070at 67.722 kb on + strandat 67.800 kb on + strandat 67.901 kb on - strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.939 kb on + strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.947 kb on - strand, within B158DRAFT_0071at 67.985 kb on - strand, within B158DRAFT_0071at 68.047 kb on - strand, within B158DRAFT_0071at 68.052 kb on + strand, within B158DRAFT_0071at 68.317 kb on - strandat 68.324 kb on + strandat 68.324 kb on + strandat 68.348 kb on + strandat 68.387 kb on - strandat 68.483 kb on + strandat 68.491 kb on - strandat 68.595 kb on + strandat 68.595 kb on + strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.603 kb on - strandat 68.623 kb on + strandat 68.674 kb on + strand, within B158DRAFT_0072at 68.682 kb on - strand, within B158DRAFT_0072at 68.726 kb on - strand, within B158DRAFT_0072

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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66,425 - -2.9
66,524 + B158DRAFT_0069 0.18 -4.6
66,529 + B158DRAFT_0069 0.18 -3.1
66,599 + B158DRAFT_0069 0.27 -1.6
66,609 + B158DRAFT_0069 0.29 -3.4
66,615 - B158DRAFT_0069 0.30 -2.5
66,619 + B158DRAFT_0069 0.30 -2.9
66,627 - B158DRAFT_0069 0.31 -2.7
66,642 + B158DRAFT_0069 0.33 -3.2
66,655 - B158DRAFT_0069 0.35 -1.7
66,655 - B158DRAFT_0069 0.35 -3.2
66,689 - B158DRAFT_0069 0.39 -3.7
66,749 - B158DRAFT_0069 0.47 -4.5
66,749 - B158DRAFT_0069 0.47 -3.0
66,836 + B158DRAFT_0069 0.59 -2.9
66,842 - B158DRAFT_0069 0.59 -3.3
66,922 + B158DRAFT_0069 0.70 -5.0
66,930 - B158DRAFT_0069 0.71 -4.6
66,995 + B158DRAFT_0069 0.79 -4.1
67,037 + B158DRAFT_0069 0.85 -3.0
67,045 - B158DRAFT_0069 0.86 -3.8
67,045 - B158DRAFT_0069 0.86 -3.4
67,080 + -2.9
67,100 + -4.5
67,100 + -2.7
67,207 - -0.2
67,209 + -0.4
67,278 + -0.4
67,283 + -0.8
67,283 + -0.3
67,286 - -0.3
67,286 - -0.5
67,286 - -1.3
67,288 + -0.1
67,355 - B158DRAFT_0070 0.17 -0.5
67,554 + B158DRAFT_0070 0.61 -0.4
67,582 - B158DRAFT_0070 0.67 -0.7
67,614 + B158DRAFT_0070 0.74 -0.4
67,638 + B158DRAFT_0070 0.80 -0.4
67,643 + B158DRAFT_0070 0.81 -0.6
67,648 + B158DRAFT_0070 0.82 -0.7
67,648 + B158DRAFT_0070 0.82 -0.5
67,648 + B158DRAFT_0070 0.82 -0.1
67,649 - B158DRAFT_0070 0.82 -1.2
67,651 - B158DRAFT_0070 0.83 -0.4
67,722 + -0.3
67,800 + -0.5
67,901 - B158DRAFT_0071 0.17 +0.1
67,939 + B158DRAFT_0071 0.24 -0.5
67,939 + B158DRAFT_0071 0.24 -0.1
67,939 + B158DRAFT_0071 0.24 -0.9
67,947 - B158DRAFT_0071 0.25 -0.3
67,947 - B158DRAFT_0071 0.25 -0.2
67,947 - B158DRAFT_0071 0.25 -0.2
67,947 - B158DRAFT_0071 0.25 +0.1
67,985 - B158DRAFT_0071 0.32 -0.5
68,047 - B158DRAFT_0071 0.43 -0.4
68,052 + B158DRAFT_0071 0.44 -0.4
68,317 - -0.1
68,324 + +0.8
68,324 + +0.2
68,348 + +0.1
68,387 - -0.1
68,483 + +0.1
68,491 - +0.1
68,595 + -0.1
68,595 + -0.0
68,603 - +0.3
68,603 - -0.3
68,603 - -0.0
68,603 - -0.1
68,603 - -0.4
68,623 + +0.0
68,674 + B158DRAFT_0072 0.14 +1.0
68,682 - B158DRAFT_0072 0.15 +0.4
68,726 - B158DRAFT_0072 0.21 -0.0

Or see this region's nucleotide sequence