Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0038

Experiment: m.b. Bacitracin 1.5 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0036 and B158DRAFT_0037 are separated by 67 nucleotidesB158DRAFT_0037 and B158DRAFT_0038 are separated by 23 nucleotidesB158DRAFT_0038 and B158DRAFT_0039 are separated by 61 nucleotidesB158DRAFT_0039 and B158DRAFT_0040 are separated by 29 nucleotides B158DRAFT_0036: B158DRAFT_0036 - Predicted aminopeptidases, at 35,347 to 36,393 _0036 B158DRAFT_0037: B158DRAFT_0037 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 36,461 to 36,889 _0037 B158DRAFT_0038: B158DRAFT_0038 - penicillin-binding protein 1B, at 36,913 to 39,234 _0038 B158DRAFT_0039: B158DRAFT_0039 - 2'-5' RNA ligase, at 39,296 to 39,877 _0039 B158DRAFT_0040: B158DRAFT_0040 - diguanylate cyclase (GGDEF) domain, at 39,907 to 41,715 _0040 Position (kb) 36 37 38 39 40Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 35.974 kb on + strand, within B158DRAFT_0036at 35.974 kb on + strand, within B158DRAFT_0036at 35.974 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.985 kb on + strand, within B158DRAFT_0036at 35.993 kb on - strand, within B158DRAFT_0036at 35.993 kb on - strand, within B158DRAFT_0036at 36.097 kb on + strand, within B158DRAFT_0036at 36.235 kb on - strand, within B158DRAFT_0036at 36.342 kb on + strandat 36.466 kb on - strandat 36.571 kb on + strand, within B158DRAFT_0037at 36.571 kb on + strand, within B158DRAFT_0037at 36.579 kb on - strand, within B158DRAFT_0037at 36.579 kb on - strand, within B158DRAFT_0037at 36.717 kb on - strand, within B158DRAFT_0037at 36.725 kb on - strand, within B158DRAFT_0037at 36.789 kb on - strand, within B158DRAFT_0037at 36.792 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.844 kb on + strand, within B158DRAFT_0037at 36.849 kb on + strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.852 kb on - strandat 36.862 kb on - strandat 36.867 kb on - strandat 36.875 kb on - strandat 36.885 kb on - strandat 36.904 kb on + strandat 36.957 kb on + strandat 36.965 kb on - strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.082 kb on + strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.090 kb on - strandat 37.169 kb on + strand, within B158DRAFT_0038at 37.169 kb on + strand, within B158DRAFT_0038at 37.169 kb on + strand, within B158DRAFT_0038at 37.180 kb on + strand, within B158DRAFT_0038at 37.198 kb on - strand, within B158DRAFT_0038at 37.297 kb on - strand, within B158DRAFT_0038at 37.299 kb on + strand, within B158DRAFT_0038at 37.299 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.322 kb on + strand, within B158DRAFT_0038at 37.330 kb on - strand, within B158DRAFT_0038at 37.330 kb on - strand, within B158DRAFT_0038at 37.418 kb on - strand, within B158DRAFT_0038at 37.559 kb on + strand, within B158DRAFT_0038at 37.629 kb on + strand, within B158DRAFT_0038at 37.637 kb on - strand, within B158DRAFT_0038at 37.781 kb on + strand, within B158DRAFT_0038at 37.858 kb on - strand, within B158DRAFT_0038at 37.920 kb on + strand, within B158DRAFT_0038at 37.966 kb on + strand, within B158DRAFT_0038at 37.968 kb on + strand, within B158DRAFT_0038at 38.030 kb on - strand, within B158DRAFT_0038at 38.044 kb on - strand, within B158DRAFT_0038at 38.175 kb on + strand, within B158DRAFT_0038at 38.183 kb on - strand, within B158DRAFT_0038at 38.216 kb on - strand, within B158DRAFT_0038at 38.287 kb on - strand, within B158DRAFT_0038at 38.342 kb on + strand, within B158DRAFT_0038at 38.535 kb on + strand, within B158DRAFT_0038at 38.572 kb on - strand, within B158DRAFT_0038at 38.612 kb on + strand, within B158DRAFT_0038at 38.615 kb on - strand, within B158DRAFT_0038at 38.620 kb on - strand, within B158DRAFT_0038at 38.620 kb on - strand, within B158DRAFT_0038at 38.647 kb on + strand, within B158DRAFT_0038at 38.717 kb on + strand, within B158DRAFT_0038at 38.717 kb on + strand, within B158DRAFT_0038at 38.725 kb on - strand, within B158DRAFT_0038at 38.742 kb on + strand, within B158DRAFT_0038at 38.750 kb on - strand, within B158DRAFT_0038at 38.768 kb on - strand, within B158DRAFT_0038at 38.804 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.814 kb on + strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.822 kb on - strand, within B158DRAFT_0038at 38.823 kb on - strand, within B158DRAFT_0038at 38.827 kb on + strand, within B158DRAFT_0038at 38.845 kb on - strand, within B158DRAFT_0038at 38.871 kb on + strand, within B158DRAFT_0038at 38.957 kb on - strand, within B158DRAFT_0038at 38.969 kb on - strand, within B158DRAFT_0038at 39.063 kb on + strandat 39.063 kb on + strandat 39.120 kb on - strandat 39.332 kb on + strandat 39.353 kb on - strandat 39.443 kb on + strand, within B158DRAFT_0039at 39.500 kb on + strand, within B158DRAFT_0039at 39.500 kb on + strand, within B158DRAFT_0039at 39.521 kb on - strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.697 kb on + strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.705 kb on - strand, within B158DRAFT_0039at 39.763 kb on - strand, within B158DRAFT_0039at 39.891 kb on + strandat 39.936 kb on - strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.985 kb on + strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 39.993 kb on - strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.053 kb on + strandat 40.061 kb on - strandat 40.061 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
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35,974 + B158DRAFT_0036 0.60 -0.3
35,974 + B158DRAFT_0036 0.60 -0.4
35,974 + B158DRAFT_0036 0.60 -0.6
35,985 + B158DRAFT_0036 0.61 -0.5
35,985 + B158DRAFT_0036 0.61 +0.3
35,985 + B158DRAFT_0036 0.61 -0.5
35,993 - B158DRAFT_0036 0.62 -0.9
35,993 - B158DRAFT_0036 0.62 -0.5
36,097 + B158DRAFT_0036 0.72 -0.2
36,235 - B158DRAFT_0036 0.85 -0.0
36,342 + -0.1
36,466 - -0.8
36,571 + B158DRAFT_0037 0.26 -0.3
36,571 + B158DRAFT_0037 0.26 -0.5
36,579 - B158DRAFT_0037 0.28 +0.2
36,579 - B158DRAFT_0037 0.28 -0.6
36,717 - B158DRAFT_0037 0.60 +0.6
36,725 - B158DRAFT_0037 0.62 +0.0
36,789 - B158DRAFT_0037 0.76 -0.3
36,792 + B158DRAFT_0037 0.77 -0.0
36,844 + B158DRAFT_0037 0.89 -0.0
36,844 + B158DRAFT_0037 0.89 -0.0
36,844 + B158DRAFT_0037 0.89 -0.2
36,849 + +0.5
36,852 - -0.3
36,852 - +0.2
36,852 - -3.8
36,852 - -0.2
36,852 - -0.4
36,852 - -0.3
36,862 - +0.8
36,867 - -0.3
36,875 - +0.3
36,885 - +0.1
36,904 + +0.4
36,957 + +0.1
36,965 - +0.4
37,082 + +0.7
37,082 + +0.3
37,082 + +0.1
37,082 + +0.1
37,082 + +0.6
37,090 - +0.7
37,090 - +0.6
37,090 - +1.9
37,090 - +0.6
37,169 + B158DRAFT_0038 0.11 +0.4
37,169 + B158DRAFT_0038 0.11 +0.0
37,169 + B158DRAFT_0038 0.11 +0.2
37,180 + B158DRAFT_0038 0.11 +0.9
37,198 - B158DRAFT_0038 0.12 -0.8
37,297 - B158DRAFT_0038 0.17 +0.5
37,299 + B158DRAFT_0038 0.17 +0.1
37,299 + B158DRAFT_0038 0.17 +0.0
37,322 + B158DRAFT_0038 0.18 -0.4
37,322 + B158DRAFT_0038 0.18 +0.9
37,322 + B158DRAFT_0038 0.18 +1.2
37,322 + B158DRAFT_0038 0.18 +0.1
37,330 - B158DRAFT_0038 0.18 -0.1
37,330 - B158DRAFT_0038 0.18 -0.2
37,418 - B158DRAFT_0038 0.22 +1.0
37,559 + B158DRAFT_0038 0.28 +0.1
37,629 + B158DRAFT_0038 0.31 -0.8
37,637 - B158DRAFT_0038 0.31 +1.0
37,781 + B158DRAFT_0038 0.37 +0.9
37,858 - B158DRAFT_0038 0.41 +1.1
37,920 + B158DRAFT_0038 0.43 +0.7
37,966 + B158DRAFT_0038 0.45 +0.5
37,968 + B158DRAFT_0038 0.45 -1.6
38,030 - B158DRAFT_0038 0.48 +0.7
38,044 - B158DRAFT_0038 0.49 +0.8
38,175 + B158DRAFT_0038 0.54 -0.8
38,183 - B158DRAFT_0038 0.55 -0.1
38,216 - B158DRAFT_0038 0.56 +1.5
38,287 - B158DRAFT_0038 0.59 +0.4
38,342 + B158DRAFT_0038 0.62 +0.5
38,535 + B158DRAFT_0038 0.70 +0.5
38,572 - B158DRAFT_0038 0.71 +0.7
38,612 + B158DRAFT_0038 0.73 -0.2
38,615 - B158DRAFT_0038 0.73 +0.2
38,620 - B158DRAFT_0038 0.74 -0.2
38,620 - B158DRAFT_0038 0.74 +0.8
38,647 + B158DRAFT_0038 0.75 +0.1
38,717 + B158DRAFT_0038 0.78 +0.5
38,717 + B158DRAFT_0038 0.78 +0.2
38,725 - B158DRAFT_0038 0.78 +0.6
38,742 + B158DRAFT_0038 0.79 +0.8
38,750 - B158DRAFT_0038 0.79 +0.4
38,768 - B158DRAFT_0038 0.80 +0.7
38,804 + B158DRAFT_0038 0.81 +0.6
38,814 + B158DRAFT_0038 0.82 +0.3
38,814 + B158DRAFT_0038 0.82 +0.5
38,814 + B158DRAFT_0038 0.82 +0.7
38,814 + B158DRAFT_0038 0.82 +0.5
38,814 + B158DRAFT_0038 0.82 +0.1
38,814 + B158DRAFT_0038 0.82 +0.4
38,814 + B158DRAFT_0038 0.82 +0.4
38,814 + B158DRAFT_0038 0.82 +1.2
38,822 - B158DRAFT_0038 0.82 +0.8
38,822 - B158DRAFT_0038 0.82 +1.3
38,822 - B158DRAFT_0038 0.82 +0.1
38,822 - B158DRAFT_0038 0.82 -2.5
38,822 - B158DRAFT_0038 0.82 +0.4
38,822 - B158DRAFT_0038 0.82 +0.3
38,823 - B158DRAFT_0038 0.82 +0.8
38,827 + B158DRAFT_0038 0.82 +1.0
38,845 - B158DRAFT_0038 0.83 -0.8
38,871 + B158DRAFT_0038 0.84 +0.8
38,957 - B158DRAFT_0038 0.88 -0.2
38,969 - B158DRAFT_0038 0.89 +0.2
39,063 + +0.9
39,063 + +0.5
39,120 - +0.5
39,332 + -0.4
39,353 - -0.0
39,443 + B158DRAFT_0039 0.25 +0.1
39,500 + B158DRAFT_0039 0.35 -0.5
39,500 + B158DRAFT_0039 0.35 -0.0
39,521 - B158DRAFT_0039 0.39 -0.8
39,697 + B158DRAFT_0039 0.69 -0.3
39,697 + B158DRAFT_0039 0.69 -0.1
39,697 + B158DRAFT_0039 0.69 -0.6
39,705 - B158DRAFT_0039 0.70 +0.6
39,705 - B158DRAFT_0039 0.70 -0.5
39,705 - B158DRAFT_0039 0.70 -0.0
39,705 - B158DRAFT_0039 0.70 -1.2
39,705 - B158DRAFT_0039 0.70 -0.2
39,705 - B158DRAFT_0039 0.70 -0.3
39,763 - B158DRAFT_0039 0.80 -0.3
39,891 + -0.6
39,936 - -0.5
39,985 + -0.3
39,985 + -0.4
39,985 + -0.2
39,985 + -0.1
39,985 + -0.2
39,985 + -0.2
39,985 + +0.2
39,985 + +0.5
39,985 + -0.1
39,985 + -0.0
39,985 + -0.3
39,993 - +0.0
39,993 - -0.1
39,993 - -0.3
39,993 - -0.2
39,993 - -0.2
40,053 + -0.0
40,053 + -0.7
40,053 + +0.2
40,053 + -0.2
40,061 - +0.2
40,061 - -0.0

Or see this region's nucleotide sequence