Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0001

Experiment: m.b. Bacitracin 1.5 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0001 and B158DRAFT_0002 are separated by 184 nucleotides B158DRAFT_0001: B158DRAFT_0001 - Subtilisin-like serine proteases, at 487 to 1,860 _0001 B158DRAFT_0002: B158DRAFT_0002 - tyrosyl-tRNA synthetase (EC 6.1.1.1), at 2,045 to 3,241 _0002 Position (kb) 0 1 2Strain fitness (log2 ratio) -2 -1 0 1at 0.494 kb on + strandat 0.508 kb on + strandat 0.508 kb on + strandat 0.516 kb on - strandat 0.526 kb on + strandat 0.526 kb on + strandat 0.565 kb on - strandat 0.624 kb on - strandat 0.650 kb on + strand, within B158DRAFT_0001at 0.658 kb on - strand, within B158DRAFT_0001at 0.673 kb on + strand, within B158DRAFT_0001at 0.694 kb on + strand, within B158DRAFT_0001at 0.697 kb on - strand, within B158DRAFT_0001at 0.699 kb on + strand, within B158DRAFT_0001at 0.702 kb on - strand, within B158DRAFT_0001at 0.761 kb on - strand, within B158DRAFT_0001at 0.784 kb on + strand, within B158DRAFT_0001at 0.789 kb on + strand, within B158DRAFT_0001at 0.807 kb on + strand, within B158DRAFT_0001at 0.813 kb on - strand, within B158DRAFT_0001at 0.815 kb on - strand, within B158DRAFT_0001at 0.825 kb on + strand, within B158DRAFT_0001at 0.825 kb on + strand, within B158DRAFT_0001at 0.833 kb on - strand, within B158DRAFT_0001at 0.833 kb on - strand, within B158DRAFT_0001at 0.865 kb on + strand, within B158DRAFT_0001at 0.870 kb on + strand, within B158DRAFT_0001at 0.870 kb on + strand, within B158DRAFT_0001at 0.875 kb on + strand, within B158DRAFT_0001at 0.934 kb on - strand, within B158DRAFT_0001at 0.985 kb on + strand, within B158DRAFT_0001at 1.017 kb on + strand, within B158DRAFT_0001at 1.047 kb on - strand, within B158DRAFT_0001at 1.064 kb on + strand, within B158DRAFT_0001at 1.072 kb on - strand, within B158DRAFT_0001at 1.123 kb on + strand, within B158DRAFT_0001at 1.123 kb on + strand, within B158DRAFT_0001at 1.131 kb on - strand, within B158DRAFT_0001at 1.167 kb on + strand, within B158DRAFT_0001at 1.175 kb on - strand, within B158DRAFT_0001at 1.175 kb on - strand, within B158DRAFT_0001at 1.207 kb on + strand, within B158DRAFT_0001at 1.210 kb on - strand, within B158DRAFT_0001at 1.215 kb on - strand, within B158DRAFT_0001at 1.272 kb on + strand, within B158DRAFT_0001at 1.280 kb on - strand, within B158DRAFT_0001at 1.316 kb on - strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.318 kb on + strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.326 kb on - strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.348 kb on + strand, within B158DRAFT_0001at 1.355 kb on + strand, within B158DRAFT_0001at 1.356 kb on - strand, within B158DRAFT_0001at 1.356 kb on - strand, within B158DRAFT_0001at 1.360 kb on + strand, within B158DRAFT_0001at 1.365 kb on + strand, within B158DRAFT_0001at 1.368 kb on - strand, within B158DRAFT_0001at 1.368 kb on - strand, within B158DRAFT_0001at 1.376 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.405 kb on + strand, within B158DRAFT_0001at 1.413 kb on - strand, within B158DRAFT_0001at 1.419 kb on + strand, within B158DRAFT_0001at 1.419 kb on + strand, within B158DRAFT_0001at 1.420 kb on + strand, within B158DRAFT_0001at 1.463 kb on - strand, within B158DRAFT_0001at 1.480 kb on - strand, within B158DRAFT_0001at 1.572 kb on + strand, within B158DRAFT_0001at 1.692 kb on - strand, within B158DRAFT_0001at 1.707 kb on + strand, within B158DRAFT_0001at 1.707 kb on + strand, within B158DRAFT_0001at 1.709 kb on + strand, within B158DRAFT_0001at 1.715 kb on - strand, within B158DRAFT_0001at 1.717 kb on - strand, within B158DRAFT_0001at 1.748 kb on - strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.775 kb on + strandat 1.778 kb on - strandat 1.780 kb on + strandat 1.783 kb on - strandat 1.794 kb on - strandat 1.817 kb on + strandat 1.825 kb on - strandat 1.841 kb on - strandat 1.896 kb on + strandat 1.901 kb on + strandat 1.904 kb on - strandat 1.906 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Bacitracin 1.5 mg/ml
remove
494 + -0.3
508 + +0.7
508 + -0.3
516 - -0.3
526 + -0.5
526 + -0.6
565 - -0.4
624 - -0.2
650 + B158DRAFT_0001 0.12 +0.8
658 - B158DRAFT_0001 0.12 +1.0
673 + B158DRAFT_0001 0.14 -0.9
694 + B158DRAFT_0001 0.15 -0.5
697 - B158DRAFT_0001 0.15 +0.5
699 + B158DRAFT_0001 0.15 -0.4
702 - B158DRAFT_0001 0.16 -0.5
761 - B158DRAFT_0001 0.20 +0.0
784 + B158DRAFT_0001 0.22 +0.3
789 + B158DRAFT_0001 0.22 -0.3
807 + B158DRAFT_0001 0.23 -0.3
813 - B158DRAFT_0001 0.24 -0.7
815 - B158DRAFT_0001 0.24 -0.9
825 + B158DRAFT_0001 0.25 -0.2
825 + B158DRAFT_0001 0.25 +0.5
833 - B158DRAFT_0001 0.25 -0.1
833 - B158DRAFT_0001 0.25 -0.5
865 + B158DRAFT_0001 0.28 -1.0
870 + B158DRAFT_0001 0.28 +0.3
870 + B158DRAFT_0001 0.28 +0.5
875 + B158DRAFT_0001 0.28 -1.1
934 - B158DRAFT_0001 0.33 -0.0
985 + B158DRAFT_0001 0.36 +0.4
1,017 + B158DRAFT_0001 0.39 +0.5
1,047 - B158DRAFT_0001 0.41 +0.2
1,064 + B158DRAFT_0001 0.42 +0.2
1,072 - B158DRAFT_0001 0.43 +1.2
1,123 + B158DRAFT_0001 0.46 +0.2
1,123 + B158DRAFT_0001 0.46 -0.0
1,131 - B158DRAFT_0001 0.47 +0.2
1,167 + B158DRAFT_0001 0.49 -0.2
1,175 - B158DRAFT_0001 0.50 -0.3
1,175 - B158DRAFT_0001 0.50 -2.7
1,207 + B158DRAFT_0001 0.52 -0.1
1,210 - B158DRAFT_0001 0.53 -0.4
1,215 - B158DRAFT_0001 0.53 +0.3
1,272 + B158DRAFT_0001 0.57 +0.1
1,280 - B158DRAFT_0001 0.58 +0.4
1,316 - B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -0.4
1,318 + B158DRAFT_0001 0.60 -0.5
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 -0.4
1,318 + B158DRAFT_0001 0.60 -0.9
1,318 + B158DRAFT_0001 0.60 +0.2
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 -0.6
1,318 + B158DRAFT_0001 0.60 -0.0
1,318 + B158DRAFT_0001 0.60 +0.1
1,318 + B158DRAFT_0001 0.60 -2.6
1,318 + B158DRAFT_0001 0.60 +0.0
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 -0.5
1,318 + B158DRAFT_0001 0.60 +0.4
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 -1.4
1,318 + B158DRAFT_0001 0.60 -1.1
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 +0.5
1,318 + B158DRAFT_0001 0.60 -0.7
1,318 + B158DRAFT_0001 0.60 -0.4
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 +0.4
1,318 + B158DRAFT_0001 0.60 -2.6
1,318 + B158DRAFT_0001 0.60 +0.0
1,318 + B158DRAFT_0001 0.60 -1.3
1,318 + B158DRAFT_0001 0.60 +0.5
1,318 + B158DRAFT_0001 0.60 -1.1
1,318 + B158DRAFT_0001 0.60 -0.3
1,318 + B158DRAFT_0001 0.60 -0.2
1,318 + B158DRAFT_0001 0.60 +0.6
1,318 + B158DRAFT_0001 0.60 -0.1
1,318 + B158DRAFT_0001 0.60 +0.2
1,318 + B158DRAFT_0001 0.60 +0.5
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 +0.5
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 -1.0
1,326 - B158DRAFT_0001 0.61 +0.1
1,326 - B158DRAFT_0001 0.61 -1.0
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 +0.4
1,326 - B158DRAFT_0001 0.61 +1.0
1,326 - B158DRAFT_0001 0.61 -0.1
1,326 - B158DRAFT_0001 0.61 -0.5
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 -0.1
1,326 - B158DRAFT_0001 0.61 -0.6
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 -0.0
1,326 - B158DRAFT_0001 0.61 -0.9
1,326 - B158DRAFT_0001 0.61 -1.4
1,326 - B158DRAFT_0001 0.61 -1.0
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 -0.1
1,326 - B158DRAFT_0001 0.61 -1.1
1,326 - B158DRAFT_0001 0.61 +0.0
1,326 - B158DRAFT_0001 0.61 -0.5
1,326 - B158DRAFT_0001 0.61 +0.1
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 -0.3
1,326 - B158DRAFT_0001 0.61 +0.2
1,326 - B158DRAFT_0001 0.61 -0.6
1,326 - B158DRAFT_0001 0.61 -0.2
1,326 - B158DRAFT_0001 0.61 -0.5
1,326 - B158DRAFT_0001 0.61 +0.0
1,326 - B158DRAFT_0001 0.61 +1.6
1,326 - B158DRAFT_0001 0.61 -0.4
1,326 - B158DRAFT_0001 0.61 -0.8
1,326 - B158DRAFT_0001 0.61 -1.3
1,348 + B158DRAFT_0001 0.63 +0.2
1,348 + B158DRAFT_0001 0.63 -0.6
1,348 + B158DRAFT_0001 0.63 -0.8
1,355 + B158DRAFT_0001 0.63 -0.2
1,356 - B158DRAFT_0001 0.63 -0.3
1,356 - B158DRAFT_0001 0.63 -0.5
1,360 + B158DRAFT_0001 0.64 -0.2
1,365 + B158DRAFT_0001 0.64 +0.1
1,368 - B158DRAFT_0001 0.64 -2.0
1,368 - B158DRAFT_0001 0.64 -0.2
1,376 + B158DRAFT_0001 0.65 +0.0
1,405 + B158DRAFT_0001 0.67 +0.1
1,405 + B158DRAFT_0001 0.67 -0.0
1,405 + B158DRAFT_0001 0.67 -0.1
1,413 - B158DRAFT_0001 0.67 -0.6
1,419 + B158DRAFT_0001 0.68 -0.2
1,419 + B158DRAFT_0001 0.68 -0.2
1,420 + B158DRAFT_0001 0.68 -0.6
1,463 - B158DRAFT_0001 0.71 +0.3
1,480 - B158DRAFT_0001 0.72 -0.1
1,572 + B158DRAFT_0001 0.79 +1.2
1,692 - B158DRAFT_0001 0.88 -0.1
1,707 + B158DRAFT_0001 0.89 +0.1
1,707 + B158DRAFT_0001 0.89 -0.8
1,709 + B158DRAFT_0001 0.89 +0.9
1,715 - B158DRAFT_0001 0.89 +0.3
1,717 - B158DRAFT_0001 0.90 +0.5
1,748 - -0.0
1,775 + -0.5
1,775 + +0.5
1,775 + +0.3
1,775 + -0.2
1,775 + -0.5
1,775 + -0.1
1,775 + -1.2
1,778 - -0.8
1,780 + -0.5
1,783 - -0.1
1,794 - -1.2
1,817 + -0.6
1,825 - +0.6
1,841 - -0.4
1,896 + -0.6
1,901 + -1.3
1,904 - -0.5
1,906 + +0.1

Or see this region's nucleotide sequence