Experiment: m.b. benzoic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2227 and B158DRAFT_2228 are separated by 115 nucleotides B158DRAFT_2228 and B158DRAFT_2229 are separated by 70 nucleotides
B158DRAFT_2227: B158DRAFT_2227 - DNA topoisomerase I, bacterial, at 377,626 to 380,256
_2227
B158DRAFT_2228: B158DRAFT_2228 - dihydroorotate oxidase A (EC 1.3.3.1), at 380,372 to 381,400
_2228
B158DRAFT_2229: B158DRAFT_2229 - 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52), at 381,471 to 383,627
_2229
Position (kb) 380
381
382 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 379.805 kb on - strand, within B158DRAFT_2227 at 379.908 kb on + strand, within B158DRAFT_2227 at 379.908 kb on + strand, within B158DRAFT_2227 at 379.916 kb on - strand, within B158DRAFT_2227 at 379.934 kb on - strand, within B158DRAFT_2227 at 379.962 kb on + strand, within B158DRAFT_2227 at 380.047 kb on + strand at 380.180 kb on - strand at 380.191 kb on - strand at 381.499 kb on - strand at 381.522 kb on + strand at 381.530 kb on - strand at 381.613 kb on - strand at 381.686 kb on - strand at 381.708 kb on - strand, within B158DRAFT_2229 at 381.790 kb on + strand, within B158DRAFT_2229 at 381.911 kb on + strand, within B158DRAFT_2229 at 381.919 kb on - strand, within B158DRAFT_2229 at 381.921 kb on + strand, within B158DRAFT_2229 at 381.930 kb on - strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.943 kb on + strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.951 kb on - strand, within B158DRAFT_2229 at 381.958 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 381.970 kb on + strand, within B158DRAFT_2229 at 382.011 kb on + strand, within B158DRAFT_2229 at 382.016 kb on + strand, within B158DRAFT_2229 at 382.016 kb on - strand, within B158DRAFT_2229 at 382.047 kb on + strand, within B158DRAFT_2229 at 382.049 kb on + strand, within B158DRAFT_2229 at 382.057 kb on - strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.131 kb on + strand, within B158DRAFT_2229 at 382.282 kb on + strand, within B158DRAFT_2229 at 382.374 kb on - strand, within B158DRAFT_2229 at 382.384 kb on + strand, within B158DRAFT_2229
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml remove 379,805 - B158DRAFT_2227 0.83 -0.4 379,908 + B158DRAFT_2227 0.87 -3.2 379,908 + B158DRAFT_2227 0.87 -0.8 379,916 - B158DRAFT_2227 0.87 -3.0 379,934 - B158DRAFT_2227 0.88 -2.4 379,962 + B158DRAFT_2227 0.89 -1.2 380,047 + -0.5 380,180 - -0.7 380,191 - -0.2 381,499 - -0.2 381,522 + -1.2 381,530 - -0.5 381,613 - +0.1 381,686 - -0.2 381,708 - B158DRAFT_2229 0.11 -0.5 381,790 + B158DRAFT_2229 0.15 -0.3 381,911 + B158DRAFT_2229 0.20 -0.2 381,919 - B158DRAFT_2229 0.21 -0.6 381,921 + B158DRAFT_2229 0.21 -0.8 381,930 - B158DRAFT_2229 0.21 -0.3 381,943 + B158DRAFT_2229 0.22 -0.1 381,943 + B158DRAFT_2229 0.22 -0.8 381,951 - B158DRAFT_2229 0.22 -0.5 381,951 - B158DRAFT_2229 0.22 -1.5 381,958 + B158DRAFT_2229 0.23 -0.1 381,970 + B158DRAFT_2229 0.23 -0.8 381,970 + B158DRAFT_2229 0.23 -0.5 382,011 + B158DRAFT_2229 0.25 +0.9 382,016 + B158DRAFT_2229 0.25 -0.6 382,016 - B158DRAFT_2229 0.25 -0.4 382,047 + B158DRAFT_2229 0.27 +0.0 382,049 + B158DRAFT_2229 0.27 -0.4 382,057 - B158DRAFT_2229 0.27 -0.5 382,131 + B158DRAFT_2229 0.31 +0.0 382,131 + B158DRAFT_2229 0.31 -0.3 382,282 + B158DRAFT_2229 0.38 +0.2 382,374 - B158DRAFT_2229 0.42 -0.3 382,384 + B158DRAFT_2229 0.42 -1.3
Or see this region's nucleotide sequence