Experiment: m.b. benzoic 0.2 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2059 and B158DRAFT_2060 overlap by 4 nucleotides B158DRAFT_2060 and B158DRAFT_2061 are separated by 250 nucleotides B158DRAFT_2061 and B158DRAFT_2062 are separated by 192 nucleotides
B158DRAFT_2059: B158DRAFT_2059 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 193,355 to 194,230
_2059
B158DRAFT_2060: B158DRAFT_2060 - outer membrane lipoprotein LolB, at 194,227 to 194,853
_2060
B158DRAFT_2061: B158DRAFT_2061 - hypothetical protein, at 195,104 to 197,074
_2061
B158DRAFT_2062: B158DRAFT_2062 - glutamyl-tRNA reductase (EC 1.2.1.70), at 197,267 to 198,523
_2062
Position (kb) 195
196
197
198 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 194.183 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.192 kb on - strand at 194.241 kb on - strand at 194.246 kb on - strand at 194.246 kb on - strand at 194.905 kb on - strand at 194.905 kb on - strand at 194.905 kb on - strand at 194.961 kb on + strand at 194.961 kb on + strand at 194.969 kb on + strand at 194.969 kb on - strand at 194.971 kb on - strand at 194.984 kb on + strand at 195.029 kb on - strand at 195.037 kb on - strand at 195.045 kb on - strand at 195.059 kb on + strand at 195.064 kb on + strand at 195.064 kb on + strand at 195.064 kb on + strand at 195.064 kb on + strand at 195.064 kb on + strand at 195.069 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.070 kb on + strand at 195.072 kb on - strand at 195.077 kb on - strand at 195.078 kb on - strand at 195.078 kb on - strand at 195.078 kb on - strand at 195.078 kb on - strand at 195.078 kb on - strand at 195.106 kb on + strand at 195.106 kb on + strand at 195.121 kb on - strand at 195.150 kb on + strand at 195.158 kb on + strand at 195.222 kb on + strand at 195.230 kb on - strand at 195.234 kb on + strand at 195.242 kb on - strand at 195.244 kb on + strand at 195.252 kb on + strand at 195.293 kb on + strand at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.323 kb on + strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.331 kb on - strand, within B158DRAFT_2061 at 195.344 kb on + strand, within B158DRAFT_2061 at 195.419 kb on + strand, within B158DRAFT_2061 at 195.443 kb on - strand, within B158DRAFT_2061 at 195.471 kb on + strand, within B158DRAFT_2061 at 195.479 kb on + strand, within B158DRAFT_2061 at 195.479 kb on - strand, within B158DRAFT_2061 at 195.479 kb on - strand, within B158DRAFT_2061 at 195.479 kb on - strand, within B158DRAFT_2061 at 195.479 kb on - strand, within B158DRAFT_2061 at 195.487 kb on - strand, within B158DRAFT_2061 at 195.487 kb on - strand, within B158DRAFT_2061 at 195.487 kb on - strand, within B158DRAFT_2061 at 195.492 kb on - strand, within B158DRAFT_2061 at 195.499 kb on - strand, within B158DRAFT_2061 at 195.519 kb on - strand, within B158DRAFT_2061 at 195.549 kb on + strand, within B158DRAFT_2061 at 195.602 kb on + strand, within B158DRAFT_2061 at 195.610 kb on - strand, within B158DRAFT_2061 at 195.657 kb on - strand, within B158DRAFT_2061 at 195.687 kb on + strand, within B158DRAFT_2061 at 195.687 kb on + strand, within B158DRAFT_2061 at 195.690 kb on - strand, within B158DRAFT_2061 at 195.722 kb on + strand, within B158DRAFT_2061 at 195.880 kb on - strand, within B158DRAFT_2061 at 195.900 kb on - strand, within B158DRAFT_2061 at 195.956 kb on + strand, within B158DRAFT_2061 at 195.982 kb on - strand, within B158DRAFT_2061 at 195.984 kb on + strand, within B158DRAFT_2061 at 195.984 kb on + strand, within B158DRAFT_2061 at 195.984 kb on + strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 195.992 kb on - strand, within B158DRAFT_2061 at 196.142 kb on + strand, within B158DRAFT_2061 at 196.160 kb on - strand, within B158DRAFT_2061 at 196.223 kb on + strand, within B158DRAFT_2061 at 196.224 kb on - strand, within B158DRAFT_2061 at 196.318 kb on + strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.368 kb on + strand, within B158DRAFT_2061 at 196.368 kb on + strand, within B158DRAFT_2061 at 196.370 kb on - strand, within B158DRAFT_2061 at 196.396 kb on - strand, within B158DRAFT_2061 at 196.413 kb on + strand, within B158DRAFT_2061 at 196.421 kb on - strand, within B158DRAFT_2061 at 196.474 kb on - strand, within B158DRAFT_2061 at 196.483 kb on - strand, within B158DRAFT_2061 at 196.508 kb on + strand, within B158DRAFT_2061 at 196.508 kb on + strand, within B158DRAFT_2061 at 196.513 kb on + strand, within B158DRAFT_2061 at 196.521 kb on - strand, within B158DRAFT_2061 at 196.551 kb on + strand, within B158DRAFT_2061 at 196.551 kb on + strand, within B158DRAFT_2061 at 196.556 kb on + strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.580 kb on - strand, within B158DRAFT_2061 at 196.653 kb on + strand, within B158DRAFT_2061 at 196.653 kb on + strand, within B158DRAFT_2061 at 196.676 kb on + strand, within B158DRAFT_2061 at 196.728 kb on - strand, within B158DRAFT_2061 at 196.728 kb on - strand, within B158DRAFT_2061 at 196.741 kb on - strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.778 kb on + strand, within B158DRAFT_2061 at 196.921 kb on - strand at 196.921 kb on - strand at 196.947 kb on - strand at 196.975 kb on + strand at 196.984 kb on + strand at 196.987 kb on - strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.999 kb on + strand at 197.007 kb on - strand at 197.080 kb on - strand at 197.180 kb on - strand at 197.187 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.2 mg/ml remove 194,183 - -3.2 194,192 - -0.8 194,192 - -1.7 194,192 - -1.7 194,192 - -3.2 194,192 - -2.0 194,192 - -2.1 194,241 - -1.1 194,246 - -0.9 194,246 - -1.6 194,905 - -0.1 194,905 - -0.8 194,905 - +0.5 194,961 + +0.1 194,961 + -0.5 194,969 + -1.1 194,969 - -0.3 194,971 - -1.1 194,984 + -0.6 195,029 - -1.0 195,037 - +0.8 195,045 - -0.4 195,059 + -0.8 195,064 + -0.4 195,064 + +0.1 195,064 + -0.1 195,064 + -0.1 195,064 + -0.2 195,069 + -0.1 195,070 + -0.4 195,070 + +0.4 195,070 + -0.0 195,070 + -0.5 195,070 + -0.7 195,070 + +0.1 195,070 + -0.8 195,072 - -0.4 195,077 - +0.2 195,078 - -0.7 195,078 - +0.1 195,078 - -0.0 195,078 - -0.2 195,078 - +0.3 195,106 + -1.3 195,106 + -1.1 195,121 - -1.1 195,150 + -2.0 195,158 + -2.0 195,222 + -1.0 195,230 - -0.2 195,234 + -2.7 195,242 - -2.4 195,244 + -1.0 195,252 + -0.5 195,293 + -1.0 195,323 + B158DRAFT_2061 0.11 -0.7 195,323 + B158DRAFT_2061 0.11 -1.9 195,323 + B158DRAFT_2061 0.11 -1.7 195,323 + B158DRAFT_2061 0.11 -2.9 195,323 + B158DRAFT_2061 0.11 -1.2 195,323 + B158DRAFT_2061 0.11 -1.0 195,323 + B158DRAFT_2061 0.11 -1.7 195,323 + B158DRAFT_2061 0.11 -1.6 195,331 - B158DRAFT_2061 0.12 -2.6 195,331 - B158DRAFT_2061 0.12 -1.2 195,331 - B158DRAFT_2061 0.12 -2.7 195,331 - B158DRAFT_2061 0.12 -1.2 195,331 - B158DRAFT_2061 0.12 -2.2 195,331 - B158DRAFT_2061 0.12 -1.8 195,344 + B158DRAFT_2061 0.12 -1.2 195,419 + B158DRAFT_2061 0.16 -1.6 195,443 - B158DRAFT_2061 0.17 -2.0 195,471 + B158DRAFT_2061 0.19 -2.2 195,479 + B158DRAFT_2061 0.19 -1.5 195,479 - B158DRAFT_2061 0.19 +0.2 195,479 - B158DRAFT_2061 0.19 -1.1 195,479 - B158DRAFT_2061 0.19 -0.4 195,479 - B158DRAFT_2061 0.19 -1.9 195,487 - B158DRAFT_2061 0.19 -2.0 195,487 - B158DRAFT_2061 0.19 -3.9 195,487 - B158DRAFT_2061 0.19 -0.3 195,492 - B158DRAFT_2061 0.20 -1.9 195,499 - B158DRAFT_2061 0.20 -3.0 195,519 - B158DRAFT_2061 0.21 -2.6 195,549 + B158DRAFT_2061 0.23 -2.8 195,602 + B158DRAFT_2061 0.25 -2.5 195,610 - B158DRAFT_2061 0.26 +0.2 195,657 - B158DRAFT_2061 0.28 -1.5 195,687 + B158DRAFT_2061 0.30 -3.0 195,687 + B158DRAFT_2061 0.30 -1.9 195,690 - B158DRAFT_2061 0.30 +0.5 195,722 + B158DRAFT_2061 0.31 -2.8 195,880 - B158DRAFT_2061 0.39 -2.7 195,900 - B158DRAFT_2061 0.40 -3.0 195,956 + B158DRAFT_2061 0.43 -2.1 195,982 - B158DRAFT_2061 0.45 -3.3 195,984 + B158DRAFT_2061 0.45 -1.2 195,984 + B158DRAFT_2061 0.45 -3.3 195,984 + B158DRAFT_2061 0.45 -3.2 195,992 - B158DRAFT_2061 0.45 -1.5 195,992 - B158DRAFT_2061 0.45 -2.1 195,992 - B158DRAFT_2061 0.45 -3.9 195,992 - B158DRAFT_2061 0.45 -3.4 195,992 - B158DRAFT_2061 0.45 -2.2 195,992 - B158DRAFT_2061 0.45 -1.0 195,992 - B158DRAFT_2061 0.45 -0.8 195,992 - B158DRAFT_2061 0.45 -1.2 195,992 - B158DRAFT_2061 0.45 -2.5 195,992 - B158DRAFT_2061 0.45 -1.8 195,992 - B158DRAFT_2061 0.45 +0.8 195,992 - B158DRAFT_2061 0.45 -0.5 195,992 - B158DRAFT_2061 0.45 -2.6 195,992 - B158DRAFT_2061 0.45 -2.5 196,142 + B158DRAFT_2061 0.53 -4.2 196,160 - B158DRAFT_2061 0.54 -1.7 196,223 + B158DRAFT_2061 0.57 -2.3 196,224 - B158DRAFT_2061 0.57 -1.4 196,318 + B158DRAFT_2061 0.62 -1.5 196,326 - B158DRAFT_2061 0.62 -0.5 196,326 - B158DRAFT_2061 0.62 -1.0 196,326 - B158DRAFT_2061 0.62 -2.5 196,326 - B158DRAFT_2061 0.62 -1.8 196,326 - B158DRAFT_2061 0.62 -2.1 196,326 - B158DRAFT_2061 0.62 -2.2 196,368 + B158DRAFT_2061 0.64 -1.5 196,368 + B158DRAFT_2061 0.64 -1.9 196,370 - B158DRAFT_2061 0.64 -1.9 196,396 - B158DRAFT_2061 0.66 -0.5 196,413 + B158DRAFT_2061 0.66 -2.1 196,421 - B158DRAFT_2061 0.67 -1.9 196,474 - B158DRAFT_2061 0.70 -1.0 196,483 - B158DRAFT_2061 0.70 -1.4 196,508 + B158DRAFT_2061 0.71 -0.8 196,508 + B158DRAFT_2061 0.71 -2.4 196,513 + B158DRAFT_2061 0.71 -2.0 196,521 - B158DRAFT_2061 0.72 -0.5 196,551 + B158DRAFT_2061 0.73 -3.3 196,551 + B158DRAFT_2061 0.73 -2.0 196,556 + B158DRAFT_2061 0.74 -1.9 196,559 - B158DRAFT_2061 0.74 -1.9 196,559 - B158DRAFT_2061 0.74 -1.8 196,559 - B158DRAFT_2061 0.74 -3.0 196,580 - B158DRAFT_2061 0.75 -1.7 196,653 + B158DRAFT_2061 0.79 -2.1 196,653 + B158DRAFT_2061 0.79 -3.1 196,676 + B158DRAFT_2061 0.80 -3.3 196,728 - B158DRAFT_2061 0.82 -1.2 196,728 - B158DRAFT_2061 0.82 -1.0 196,741 - B158DRAFT_2061 0.83 -2.0 196,743 + B158DRAFT_2061 0.83 -2.9 196,743 + B158DRAFT_2061 0.83 -4.9 196,743 + B158DRAFT_2061 0.83 -4.6 196,743 + B158DRAFT_2061 0.83 -3.3 196,751 - B158DRAFT_2061 0.84 -1.5 196,751 - B158DRAFT_2061 0.84 -2.1 196,751 - B158DRAFT_2061 0.84 -1.5 196,751 - B158DRAFT_2061 0.84 -0.5 196,751 - B158DRAFT_2061 0.84 -0.8 196,751 - B158DRAFT_2061 0.84 -2.7 196,751 - B158DRAFT_2061 0.84 -0.5 196,751 - B158DRAFT_2061 0.84 -0.2 196,751 - B158DRAFT_2061 0.84 -1.0 196,753 + B158DRAFT_2061 0.84 -1.4 196,753 + B158DRAFT_2061 0.84 -1.2 196,753 + B158DRAFT_2061 0.84 -2.0 196,761 - B158DRAFT_2061 0.84 -5.5 196,761 - B158DRAFT_2061 0.84 -1.8 196,761 - B158DRAFT_2061 0.84 -0.7 196,761 - B158DRAFT_2061 0.84 -2.6 196,778 + B158DRAFT_2061 0.85 -1.2 196,921 - -2.1 196,921 - -1.9 196,947 - -1.8 196,975 + -2.2 196,984 + -2.0 196,987 - -1.4 196,989 + -1.8 196,989 + -3.8 196,989 + -2.5 196,989 + -1.2 196,989 + -2.9 196,989 + -2.2 196,989 + -0.5 196,989 + -1.4 196,989 + -0.5 196,989 + -2.5 196,989 + -0.2 196,989 + -2.6 196,989 + -3.3 196,989 + -2.2 196,989 + -2.5 196,989 + +0.8 196,989 + -3.4 196,989 + +0.8 196,989 + -2.6 196,989 + +0.8 196,989 + -1.0 196,989 + -1.8 196,989 + -2.7 196,989 + -0.5 196,989 + -2.4 196,989 + -1.4 196,989 + -1.4 196,989 + -1.8 196,989 + -2.1 196,989 + -1.9 196,989 + -1.8 196,997 - -3.1 196,997 - -2.3 196,997 - -0.8 196,997 - -2.8 196,997 - -1.4 196,997 - -2.1 196,997 - -3.3 196,997 - +1.8 196,997 - -1.7 196,997 - -1.4 196,997 - -1.2 196,997 - -3.1 196,997 - -1.4 196,997 - -3.1 196,997 - -1.9 196,997 - -2.8 196,997 - -2.3 196,997 - -0.5 196,997 - -1.7 196,997 - -1.9 196,997 - -3.6 196,997 - -2.0 196,997 - -2.9 196,997 - -2.9 196,997 - -1.2 196,997 - -1.9 196,997 - -1.8 196,997 - -2.7 196,997 - -1.5 196,997 - -0.8 196,997 - -2.5 196,997 - -1.7 196,997 - +0.2 196,997 - -1.9 196,999 + -2.5 197,007 - -3.2 197,080 - -0.9 197,180 - +0.2 197,187 - +0.3
Or see this region's nucleotide sequence