Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2306 and B158DRAFT_2307 are separated by 17 nucleotides B158DRAFT_2307 and B158DRAFT_2308 are separated by 21 nucleotides
B158DRAFT_2306: B158DRAFT_2306 - tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 467,079 to 468,296
_2306
B158DRAFT_2307: B158DRAFT_2307 - condensin subunit ScpA, at 468,314 to 469,231
_2307
B158DRAFT_2308: B158DRAFT_2308 - segregation and condensation protein B, at 469,253 to 470,206
_2308
Position (kb) 468
469
470 Strain fitness (log2 ratio) -2
-1
0
1
2 at 468.393 kb on + strand at 468.401 kb on - strand at 468.457 kb on - strand, within B158DRAFT_2307 at 468.730 kb on - strand, within B158DRAFT_2307 at 468.784 kb on - strand, within B158DRAFT_2307 at 468.835 kb on + strand, within B158DRAFT_2307 at 468.899 kb on + strand, within B158DRAFT_2307 at 468.907 kb on - strand, within B158DRAFT_2307 at 468.907 kb on - strand, within B158DRAFT_2307 at 468.930 kb on + strand, within B158DRAFT_2307 at 468.940 kb on + strand, within B158DRAFT_2307 at 468.940 kb on + strand, within B158DRAFT_2307 at 469.104 kb on + strand, within B158DRAFT_2307 at 469.145 kb on + strand at 469.145 kb on + strand at 469.150 kb on + strand at 469.153 kb on - strand at 469.178 kb on - strand at 469.178 kb on - strand at 469.190 kb on + strand at 469.190 kb on + strand at 469.198 kb on - strand at 469.198 kb on - strand at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.419 kb on + strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.427 kb on - strand, within B158DRAFT_2308 at 469.494 kb on + strand, within B158DRAFT_2308 at 469.780 kb on - strand, within B158DRAFT_2308 at 469.803 kb on - strand, within B158DRAFT_2308 at 469.878 kb on + strand, within B158DRAFT_2308 at 469.953 kb on - strand, within B158DRAFT_2308 at 469.956 kb on + strand, within B158DRAFT_2308 at 469.956 kb on + strand, within B158DRAFT_2308 at 470.003 kb on + strand, within B158DRAFT_2308 at 470.037 kb on - strand, within B158DRAFT_2308 at 470.048 kb on + strand, within B158DRAFT_2308 at 470.079 kb on + strand, within B158DRAFT_2308 at 470.081 kb on + strand, within B158DRAFT_2308
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 468,393 + -2.7 468,401 - +0.0 468,457 - B158DRAFT_2307 0.16 -1.4 468,730 - B158DRAFT_2307 0.45 -1.9 468,784 - B158DRAFT_2307 0.51 -1.7 468,835 + B158DRAFT_2307 0.57 -0.3 468,899 + B158DRAFT_2307 0.64 -2.7 468,907 - B158DRAFT_2307 0.65 -1.1 468,907 - B158DRAFT_2307 0.65 -0.3 468,930 + B158DRAFT_2307 0.67 -2.1 468,940 + B158DRAFT_2307 0.68 +0.7 468,940 + B158DRAFT_2307 0.68 -1.9 469,104 + B158DRAFT_2307 0.86 -1.9 469,145 + -0.1 469,145 + -0.1 469,150 + +1.0 469,153 - -0.3 469,178 - -1.3 469,178 - -0.3 469,190 + +0.1 469,190 + +0.3 469,198 - +0.3 469,198 - -2.1 469,419 + B158DRAFT_2308 0.17 -2.3 469,419 + B158DRAFT_2308 0.17 -0.3 469,419 + B158DRAFT_2308 0.17 -0.7 469,419 + B158DRAFT_2308 0.17 -0.3 469,419 + B158DRAFT_2308 0.17 -2.7 469,419 + B158DRAFT_2308 0.17 -1.2 469,419 + B158DRAFT_2308 0.17 -1.6 469,419 + B158DRAFT_2308 0.17 -1.6 469,419 + B158DRAFT_2308 0.17 -0.3 469,419 + B158DRAFT_2308 0.17 -1.1 469,419 + B158DRAFT_2308 0.17 -0.7 469,419 + B158DRAFT_2308 0.17 -1.9 469,419 + B158DRAFT_2308 0.17 -1.1 469,427 - B158DRAFT_2308 0.18 -1.7 469,427 - B158DRAFT_2308 0.18 -0.3 469,427 - B158DRAFT_2308 0.18 +2.3 469,427 - B158DRAFT_2308 0.18 +0.3 469,427 - B158DRAFT_2308 0.18 +0.3 469,427 - B158DRAFT_2308 0.18 -1.1 469,427 - B158DRAFT_2308 0.18 -1.4 469,427 - B158DRAFT_2308 0.18 -1.1 469,494 + B158DRAFT_2308 0.25 -0.6 469,780 - B158DRAFT_2308 0.55 -0.4 469,803 - B158DRAFT_2308 0.58 +0.4 469,878 + B158DRAFT_2308 0.66 -0.2 469,953 - B158DRAFT_2308 0.73 -0.0 469,956 + B158DRAFT_2308 0.74 +0.3 469,956 + B158DRAFT_2308 0.74 +0.1 470,003 + B158DRAFT_2308 0.79 +0.6 470,037 - B158DRAFT_2308 0.82 +1.3 470,048 + B158DRAFT_2308 0.83 -0.2 470,079 + B158DRAFT_2308 0.87 +0.3 470,081 + B158DRAFT_2308 0.87 +0.1
Or see this region's nucleotide sequence