Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2305

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2303 and B158DRAFT_2304 are separated by 86 nucleotidesB158DRAFT_2304 and B158DRAFT_2305 are separated by 37 nucleotidesB158DRAFT_2305 and B158DRAFT_2306 are separated by 111 nucleotides B158DRAFT_2303: B158DRAFT_2303 - Intracellular septation protein A, at 464,802 to 465,389 _2303 B158DRAFT_2304: B158DRAFT_2304 - Predicted metal-dependent phosphoesterases (PHP family), at 465,476 to 466,306 _2304 B158DRAFT_2305: B158DRAFT_2305 - translation factor SUA5, at 466,344 to 466,967 _2305 B158DRAFT_2306: B158DRAFT_2306 - tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 467,079 to 468,296 _2306 Position (kb) 466 467Strain fitness (log2 ratio) -1 0 1at 465.385 kb on + strandat 465.392 kb on - strandat 465.392 kb on - strandat 465.425 kb on - strandat 465.476 kb on - strandat 465.495 kb on + strandat 465.537 kb on + strandat 465.556 kb on + strandat 465.561 kb on + strand, within B158DRAFT_2304at 465.569 kb on - strand, within B158DRAFT_2304at 465.599 kb on - strand, within B158DRAFT_2304at 465.634 kb on - strand, within B158DRAFT_2304at 465.665 kb on - strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.684 kb on + strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.692 kb on - strand, within B158DRAFT_2304at 465.767 kb on + strand, within B158DRAFT_2304at 465.813 kb on + strand, within B158DRAFT_2304at 465.821 kb on - strand, within B158DRAFT_2304at 465.859 kb on + strand, within B158DRAFT_2304at 465.859 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.884 kb on + strand, within B158DRAFT_2304at 465.886 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.892 kb on - strand, within B158DRAFT_2304at 465.898 kb on + strand, within B158DRAFT_2304at 465.898 kb on + strand, within B158DRAFT_2304at 465.989 kb on - strand, within B158DRAFT_2304at 466.042 kb on - strand, within B158DRAFT_2304at 466.047 kb on - strand, within B158DRAFT_2304at 466.047 kb on - strand, within B158DRAFT_2304at 466.073 kb on - strand, within B158DRAFT_2304at 466.087 kb on + strand, within B158DRAFT_2304at 466.096 kb on - strand, within B158DRAFT_2304at 466.096 kb on - strand, within B158DRAFT_2304at 466.119 kb on + strand, within B158DRAFT_2304at 466.129 kb on + strand, within B158DRAFT_2304at 466.137 kb on - strand, within B158DRAFT_2304at 466.137 kb on - strand, within B158DRAFT_2304at 466.153 kb on - strand, within B158DRAFT_2304at 466.185 kb on + strand, within B158DRAFT_2304at 466.193 kb on - strand, within B158DRAFT_2304at 466.200 kb on + strand, within B158DRAFT_2304at 466.209 kb on + strand, within B158DRAFT_2304at 466.217 kb on - strand, within B158DRAFT_2304at 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.234 kb on + strandat 466.235 kb on + strandat 466.235 kb on + strandat 466.235 kb on + strandat 466.237 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.242 kb on - strandat 466.243 kb on - strandat 466.276 kb on + strandat 466.276 kb on + strandat 466.276 kb on + strandat 466.283 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.284 kb on - strandat 466.312 kb on + strandat 466.428 kb on + strand, within B158DRAFT_2305at 466.428 kb on + strand, within B158DRAFT_2305at 466.436 kb on - strand, within B158DRAFT_2305at 466.463 kb on + strand, within B158DRAFT_2305at 466.471 kb on - strand, within B158DRAFT_2305at 466.537 kb on - strand, within B158DRAFT_2305at 466.542 kb on - strand, within B158DRAFT_2305at 466.542 kb on - strand, within B158DRAFT_2305at 466.636 kb on + strand, within B158DRAFT_2305at 466.644 kb on - strand, within B158DRAFT_2305at 466.644 kb on - strand, within B158DRAFT_2305at 466.644 kb on - strand, within B158DRAFT_2305at 466.644 kb on - strand, within B158DRAFT_2305at 466.800 kb on + strand, within B158DRAFT_2305at 466.801 kb on + strand, within B158DRAFT_2305at 466.801 kb on - strand, within B158DRAFT_2305at 466.808 kb on - strand, within B158DRAFT_2305at 466.809 kb on - strand, within B158DRAFT_2305at 466.946 kb on - strandat 466.979 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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465,385 + +0.3
465,392 - +0.3
465,392 - -1.3
465,425 - -0.7
465,476 - -0.3
465,495 + -0.8
465,537 + -0.1
465,556 + +0.2
465,561 + B158DRAFT_2304 0.10 +0.3
465,569 - B158DRAFT_2304 0.11 -0.3
465,599 - B158DRAFT_2304 0.15 +0.1
465,634 - B158DRAFT_2304 0.19 -0.1
465,665 - B158DRAFT_2304 0.23 +0.1
465,684 + B158DRAFT_2304 0.25 -0.5
465,684 + B158DRAFT_2304 0.25 -0.2
465,692 - B158DRAFT_2304 0.26 -0.6
465,692 - B158DRAFT_2304 0.26 +0.5
465,692 - B158DRAFT_2304 0.26 +0.1
465,692 - B158DRAFT_2304 0.26 -0.3
465,767 + B158DRAFT_2304 0.35 +0.1
465,813 + B158DRAFT_2304 0.41 -0.2
465,821 - B158DRAFT_2304 0.42 +0.1
465,859 + B158DRAFT_2304 0.46 -0.3
465,859 + B158DRAFT_2304 0.46 -0.3
465,884 + B158DRAFT_2304 0.49 +0.2
465,884 + B158DRAFT_2304 0.49 +0.1
465,884 + B158DRAFT_2304 0.49 +0.4
465,884 + B158DRAFT_2304 0.49 -0.2
465,886 - B158DRAFT_2304 0.49 -0.1
465,892 - B158DRAFT_2304 0.50 +0.3
465,892 - B158DRAFT_2304 0.50 +0.4
465,892 - B158DRAFT_2304 0.50 -0.3
465,892 - B158DRAFT_2304 0.50 +0.1
465,898 + B158DRAFT_2304 0.51 -1.1
465,898 + B158DRAFT_2304 0.51 +0.0
465,989 - B158DRAFT_2304 0.62 +0.3
466,042 - B158DRAFT_2304 0.68 -0.0
466,047 - B158DRAFT_2304 0.69 +0.0
466,047 - B158DRAFT_2304 0.69 -0.2
466,073 - B158DRAFT_2304 0.72 +0.1
466,087 + B158DRAFT_2304 0.74 +0.0
466,096 - B158DRAFT_2304 0.75 -0.2
466,096 - B158DRAFT_2304 0.75 +0.6
466,119 + B158DRAFT_2304 0.77 +0.7
466,129 + B158DRAFT_2304 0.79 -0.7
466,137 - B158DRAFT_2304 0.80 +0.1
466,137 - B158DRAFT_2304 0.80 +0.2
466,153 - B158DRAFT_2304 0.81 +0.0
466,185 + B158DRAFT_2304 0.85 -1.0
466,193 - B158DRAFT_2304 0.86 +0.4
466,200 + B158DRAFT_2304 0.87 -0.1
466,209 + B158DRAFT_2304 0.88 -0.5
466,217 - B158DRAFT_2304 0.89 -0.3
466,234 + -1.0
466,234 + -0.2
466,234 + +0.8
466,234 + +0.3
466,234 + -0.2
466,234 + +0.5
466,234 + -1.3
466,234 + +0.1
466,234 + -0.1
466,234 + +0.6
466,235 + +0.1
466,235 + +0.2
466,235 + -0.4
466,237 - -0.5
466,242 - -0.8
466,242 - -0.1
466,242 - +0.1
466,242 - +0.0
466,242 - +0.2
466,242 - -0.0
466,242 - -0.2
466,242 - -0.3
466,242 - +0.2
466,242 - -0.3
466,242 - -0.4
466,242 - +0.1
466,242 - +0.8
466,243 - +0.2
466,276 + +0.5
466,276 + -0.2
466,276 + -0.3
466,283 - -0.0
466,284 - +0.0
466,284 - -0.1
466,284 - +0.8
466,284 - -0.1
466,284 - +0.1
466,312 + -0.0
466,428 + B158DRAFT_2305 0.13 -0.1
466,428 + B158DRAFT_2305 0.13 -0.1
466,436 - B158DRAFT_2305 0.15 +0.3
466,463 + B158DRAFT_2305 0.19 +0.6
466,471 - B158DRAFT_2305 0.20 -0.6
466,537 - B158DRAFT_2305 0.31 +0.1
466,542 - B158DRAFT_2305 0.32 -0.3
466,542 - B158DRAFT_2305 0.32 +0.2
466,636 + B158DRAFT_2305 0.47 -0.5
466,644 - B158DRAFT_2305 0.48 -0.1
466,644 - B158DRAFT_2305 0.48 -0.1
466,644 - B158DRAFT_2305 0.48 -0.4
466,644 - B158DRAFT_2305 0.48 +0.3
466,800 + B158DRAFT_2305 0.73 -0.3
466,801 + B158DRAFT_2305 0.73 +0.0
466,801 - B158DRAFT_2305 0.73 -0.3
466,808 - B158DRAFT_2305 0.74 +0.3
466,809 - B158DRAFT_2305 0.75 +0.3
466,946 - +0.2
466,979 - +0.9

Or see this region's nucleotide sequence