Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2061 and B158DRAFT_2062 are separated by 192 nucleotides B158DRAFT_2062 and B158DRAFT_2063 are separated by 70 nucleotides
B158DRAFT_2061: B158DRAFT_2061 - hypothetical protein, at 195,104 to 197,074
_2061
B158DRAFT_2062: B158DRAFT_2062 - glutamyl-tRNA reductase (EC 1.2.1.70), at 197,267 to 198,523
_2062
B158DRAFT_2063: B158DRAFT_2063 - peptide chain release factor 1, at 198,594 to 199,688
_2063
Position (kb) 197
198
199 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 196.318 kb on + strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.326 kb on - strand, within B158DRAFT_2061 at 196.368 kb on + strand, within B158DRAFT_2061 at 196.368 kb on + strand, within B158DRAFT_2061 at 196.370 kb on - strand, within B158DRAFT_2061 at 196.396 kb on - strand, within B158DRAFT_2061 at 196.413 kb on + strand, within B158DRAFT_2061 at 196.421 kb on - strand, within B158DRAFT_2061 at 196.474 kb on - strand, within B158DRAFT_2061 at 196.483 kb on - strand, within B158DRAFT_2061 at 196.508 kb on + strand, within B158DRAFT_2061 at 196.508 kb on + strand, within B158DRAFT_2061 at 196.513 kb on + strand, within B158DRAFT_2061 at 196.521 kb on - strand, within B158DRAFT_2061 at 196.551 kb on + strand, within B158DRAFT_2061 at 196.551 kb on + strand, within B158DRAFT_2061 at 196.556 kb on + strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.559 kb on - strand, within B158DRAFT_2061 at 196.580 kb on - strand, within B158DRAFT_2061 at 196.653 kb on + strand, within B158DRAFT_2061 at 196.653 kb on + strand, within B158DRAFT_2061 at 196.676 kb on + strand, within B158DRAFT_2061 at 196.728 kb on - strand, within B158DRAFT_2061 at 196.728 kb on - strand, within B158DRAFT_2061 at 196.741 kb on - strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.743 kb on + strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.751 kb on - strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.753 kb on + strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.761 kb on - strand, within B158DRAFT_2061 at 196.778 kb on + strand, within B158DRAFT_2061 at 196.921 kb on - strand at 196.921 kb on - strand at 196.947 kb on - strand at 196.975 kb on + strand at 196.984 kb on + strand at 196.987 kb on - strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.989 kb on + strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.997 kb on - strand at 196.999 kb on + strand at 197.007 kb on - strand at 197.080 kb on - strand at 197.180 kb on - strand at 197.187 kb on - strand at 198.539 kb on + strand at 198.545 kb on + strand at 198.547 kb on + strand at 198.560 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 196,318 + B158DRAFT_2061 0.62 -0.5 196,326 - B158DRAFT_2061 0.62 +0.5 196,326 - B158DRAFT_2061 0.62 +0.4 196,326 - B158DRAFT_2061 0.62 -1.7 196,326 - B158DRAFT_2061 0.62 -2.8 196,326 - B158DRAFT_2061 0.62 -1.9 196,326 - B158DRAFT_2061 0.62 -3.0 196,368 + B158DRAFT_2061 0.64 -2.1 196,368 + B158DRAFT_2061 0.64 -2.4 196,370 - B158DRAFT_2061 0.64 -1.1 196,396 - B158DRAFT_2061 0.66 +0.5 196,413 + B158DRAFT_2061 0.66 -2.7 196,421 - B158DRAFT_2061 0.67 -3.4 196,474 - B158DRAFT_2061 0.70 -2.6 196,483 - B158DRAFT_2061 0.70 -1.9 196,508 + B158DRAFT_2061 0.71 -1.3 196,508 + B158DRAFT_2061 0.71 -2.9 196,513 + B158DRAFT_2061 0.71 -2.6 196,521 - B158DRAFT_2061 0.72 -1.1 196,551 + B158DRAFT_2061 0.73 -3.8 196,551 + B158DRAFT_2061 0.73 -1.6 196,556 + B158DRAFT_2061 0.74 -2.4 196,559 - B158DRAFT_2061 0.74 -2.4 196,559 - B158DRAFT_2061 0.74 -0.7 196,559 - B158DRAFT_2061 0.74 -3.1 196,580 - B158DRAFT_2061 0.75 -2.2 196,653 + B158DRAFT_2061 0.79 -2.7 196,653 + B158DRAFT_2061 0.79 -3.6 196,676 + B158DRAFT_2061 0.80 -4.4 196,728 - B158DRAFT_2061 0.82 -1.7 196,728 - B158DRAFT_2061 0.82 -1.6 196,741 - B158DRAFT_2061 0.83 -2.6 196,743 + B158DRAFT_2061 0.83 -2.4 196,743 + B158DRAFT_2061 0.83 -5.4 196,743 + B158DRAFT_2061 0.83 -5.1 196,743 + B158DRAFT_2061 0.83 -3.8 196,751 - B158DRAFT_2061 0.84 -2.1 196,751 - B158DRAFT_2061 0.84 -2.7 196,751 - B158DRAFT_2061 0.84 -2.1 196,751 - B158DRAFT_2061 0.84 -0.1 196,751 - B158DRAFT_2061 0.84 -2.3 196,751 - B158DRAFT_2061 0.84 -1.6 196,751 - B158DRAFT_2061 0.84 -1.1 196,751 - B158DRAFT_2061 0.84 -0.7 196,751 - B158DRAFT_2061 0.84 -1.6 196,753 + B158DRAFT_2061 0.84 -1.9 196,753 + B158DRAFT_2061 0.84 -0.7 196,753 + B158DRAFT_2061 0.84 -2.6 196,761 - B158DRAFT_2061 0.84 -4.4 196,761 - B158DRAFT_2061 0.84 -2.3 196,761 - B158DRAFT_2061 0.84 -2.2 196,761 - B158DRAFT_2061 0.84 -1.1 196,778 + B158DRAFT_2061 0.85 -0.7 196,921 - -2.7 196,921 - -0.9 196,947 - -2.3 196,975 + -2.7 196,984 + -2.6 196,987 - -1.9 196,989 + -2.3 196,989 + -3.4 196,989 + -3.0 196,989 + -1.7 196,989 + -3.4 196,989 + -2.7 196,989 + -1.1 196,989 + -1.9 196,989 + -0.1 196,989 + -3.1 196,989 + -0.7 196,989 + -2.1 196,989 + -2.9 196,989 + -2.7 196,989 + -3.1 196,989 + +1.3 196,989 + -2.9 196,989 + +0.3 196,989 + -3.1 196,989 + +0.3 196,989 + -1.6 196,989 + -2.3 196,989 + -2.3 196,989 + -1.1 196,989 + -2.9 196,989 + -1.9 196,989 + -1.9 196,989 + -2.3 196,989 + -2.7 196,989 + -2.4 196,989 + -2.3 196,997 - -2.1 196,997 - -2.8 196,997 - -1.3 196,997 - -3.3 196,997 - -1.9 196,997 - -1.7 196,997 - -2.9 196,997 - +0.3 196,997 - -2.2 196,997 - -1.9 196,997 - -1.7 196,997 - -4.6 196,997 - -1.9 196,997 - -2.6 196,997 - -2.4 196,997 - -3.3 196,997 - -1.8 196,997 - -1.1 196,997 - -2.2 196,997 - -2.4 196,997 - -3.7 196,997 - -2.6 196,997 - -3.4 196,997 - -2.4 196,997 - -1.7 196,997 - -2.4 196,997 - -1.3 196,997 - -3.3 196,997 - -2.1 196,997 - -1.3 196,997 - -3.1 196,997 - -2.2 196,997 - -1.3 196,997 - -2.4 196,999 + -3.0 197,007 - -3.7 197,080 - -0.6 197,180 - +0.7 197,187 - +0.2 198,539 + -1.9 198,545 + -0.1 198,547 + +0.8 198,560 + +0.4
Or see this region's nucleotide sequence