Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0893 and B158DRAFT_0894 are separated by 48 nucleotides B158DRAFT_0894 and B158DRAFT_0895 are separated by 46 nucleotides B158DRAFT_0895 and B158DRAFT_0896 are separated by 22 nucleotides
B158DRAFT_0893: B158DRAFT_0893 - phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1), at 915,223 to 916,074
_0893
B158DRAFT_0894: B158DRAFT_0894 - phosphate uptake regulator, PhoU, at 916,123 to 916,854
_0894
B158DRAFT_0895: B158DRAFT_0895 - phosphate regulon transcriptional regulatory protein PhoB, at 916,901 to 917,593
_0895
B158DRAFT_0896: B158DRAFT_0896 - phosphate regulon sensor kinase PhoR, at 917,616 to 918,905
_0896
Position (kb) 916
917
918 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 916.077 kb on - strand at 916.079 kb on + strand at 916.087 kb on - strand at 916.092 kb on - strand at 916.154 kb on + strand at 916.164 kb on + strand at 916.172 kb on - strand at 916.172 kb on - strand at 916.172 kb on - strand at 916.172 kb on - strand at 916.172 kb on - strand at 916.509 kb on + strand, within B158DRAFT_0894 at 916.546 kb on + strand, within B158DRAFT_0894 at 916.573 kb on + strand, within B158DRAFT_0894 at 916.587 kb on - strand, within B158DRAFT_0894 at 916.588 kb on + strand, within B158DRAFT_0894 at 916.588 kb on + strand, within B158DRAFT_0894 at 916.588 kb on + strand, within B158DRAFT_0894 at 916.697 kb on + strand, within B158DRAFT_0894 at 917.161 kb on - strand, within B158DRAFT_0895 at 917.173 kb on - strand, within B158DRAFT_0895 at 917.280 kb on - strand, within B158DRAFT_0895 at 917.323 kb on + strand, within B158DRAFT_0895 at 917.328 kb on + strand, within B158DRAFT_0895 at 917.503 kb on - strand, within B158DRAFT_0895 at 917.605 kb on - strand at 917.645 kb on + strand at 917.670 kb on - strand at 917.720 kb on - strand at 917.920 kb on - strand, within B158DRAFT_0896 at 917.951 kb on - strand, within B158DRAFT_0896 at 917.957 kb on - strand, within B158DRAFT_0896 at 918.263 kb on + strand, within B158DRAFT_0896 at 918.349 kb on - strand, within B158DRAFT_0896 at 918.385 kb on - strand, within B158DRAFT_0896 at 918.588 kb on + strand, within B158DRAFT_0896
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 916,077 - -0.0 916,079 + -0.8 916,087 - -0.7 916,092 - +0.1 916,154 + +1.0 916,164 + +0.7 916,172 - +1.0 916,172 - +0.5 916,172 - -1.8 916,172 - +0.4 916,172 - +0.1 916,509 + B158DRAFT_0894 0.53 -1.5 916,546 + B158DRAFT_0894 0.58 +1.2 916,573 + B158DRAFT_0894 0.61 -0.1 916,587 - B158DRAFT_0894 0.63 -1.8 916,588 + B158DRAFT_0894 0.64 -0.2 916,588 + B158DRAFT_0894 0.64 -0.8 916,588 + B158DRAFT_0894 0.64 +0.4 916,697 + B158DRAFT_0894 0.78 +0.2 917,161 - B158DRAFT_0895 0.38 -0.4 917,173 - B158DRAFT_0895 0.39 -2.4 917,280 - B158DRAFT_0895 0.55 -1.1 917,323 + B158DRAFT_0895 0.61 +1.1 917,328 + B158DRAFT_0895 0.62 -0.4 917,503 - B158DRAFT_0895 0.87 -2.4 917,605 - -2.4 917,645 + -0.5 917,670 - -0.4 917,720 - -2.1 917,920 - B158DRAFT_0896 0.24 -1.6 917,951 - B158DRAFT_0896 0.26 -1.8 917,957 - B158DRAFT_0896 0.26 -1.4 918,263 + B158DRAFT_0896 0.50 -3.0 918,349 - B158DRAFT_0896 0.57 -1.2 918,385 - B158DRAFT_0896 0.60 -2.6 918,588 + B158DRAFT_0896 0.75 -2.4
Or see this region's nucleotide sequence