Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0783

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0782 and B158DRAFT_0783 are separated by 100 nucleotidesB158DRAFT_0783 and B158DRAFT_0784 are separated by 32 nucleotidesB158DRAFT_0784 and B158DRAFT_0785 are separated by 11 nucleotides B158DRAFT_0782: B158DRAFT_0782 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic, at 785,024 to 786,223 _0782 B158DRAFT_0783: B158DRAFT_0783 - Phosphomannomutase, at 786,324 to 788,744 _0783 B158DRAFT_0784: B158DRAFT_0784 - transcriptional regulator, TetR family, at 788,777 to 789,370 _0784 B158DRAFT_0785: B158DRAFT_0785 - hypothetical protein, at 789,382 to 790,347 _0785 Position (kb) 786 787 788 789Strain fitness (log2 ratio) -2 -1 0 1at 786.221 kb on - strandat 786.305 kb on + strandat 786.554 kb on - strandat 786.658 kb on - strand, within B158DRAFT_0783at 786.666 kb on - strand, within B158DRAFT_0783at 786.670 kb on - strand, within B158DRAFT_0783at 786.729 kb on - strand, within B158DRAFT_0783at 786.760 kb on - strand, within B158DRAFT_0783at 786.831 kb on - strand, within B158DRAFT_0783at 786.841 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.859 kb on + strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.867 kb on - strand, within B158DRAFT_0783at 786.870 kb on + strand, within B158DRAFT_0783at 786.870 kb on + strand, within B158DRAFT_0783at 786.877 kb on - strand, within B158DRAFT_0783at 786.878 kb on - strand, within B158DRAFT_0783at 786.885 kb on - strand, within B158DRAFT_0783at 786.885 kb on - strand, within B158DRAFT_0783at 786.920 kb on + strand, within B158DRAFT_0783at 786.928 kb on - strand, within B158DRAFT_0783at 786.928 kb on - strand, within B158DRAFT_0783at 786.933 kb on - strand, within B158DRAFT_0783at 787.048 kb on - strand, within B158DRAFT_0783at 787.093 kb on - strand, within B158DRAFT_0783at 787.156 kb on - strand, within B158DRAFT_0783at 787.156 kb on - strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.216 kb on + strand, within B158DRAFT_0783at 787.224 kb on - strand, within B158DRAFT_0783at 787.224 kb on - strand, within B158DRAFT_0783at 787.224 kb on - strand, within B158DRAFT_0783at 787.246 kb on + strand, within B158DRAFT_0783at 787.246 kb on + strand, within B158DRAFT_0783at 787.254 kb on - strand, within B158DRAFT_0783at 787.328 kb on - strand, within B158DRAFT_0783at 787.407 kb on - strand, within B158DRAFT_0783at 787.484 kb on + strand, within B158DRAFT_0783at 787.487 kb on - strand, within B158DRAFT_0783at 787.487 kb on - strand, within B158DRAFT_0783at 787.492 kb on - strand, within B158DRAFT_0783at 787.494 kb on - strand, within B158DRAFT_0783at 787.534 kb on + strand, within B158DRAFT_0783at 787.534 kb on + strand, within B158DRAFT_0783at 787.534 kb on + strand, within B158DRAFT_0783at 787.542 kb on - strand, within B158DRAFT_0783at 787.542 kb on - strand, within B158DRAFT_0783at 787.568 kb on + strand, within B158DRAFT_0783at 787.568 kb on + strand, within B158DRAFT_0783at 787.568 kb on + strand, within B158DRAFT_0783at 787.568 kb on + strand, within B158DRAFT_0783at 787.568 kb on + strand, within B158DRAFT_0783at 787.660 kb on - strand, within B158DRAFT_0783at 787.660 kb on - strand, within B158DRAFT_0783at 787.697 kb on - strand, within B158DRAFT_0783at 787.699 kb on - strand, within B158DRAFT_0783at 787.710 kb on + strand, within B158DRAFT_0783at 787.859 kb on + strand, within B158DRAFT_0783at 787.925 kb on + strand, within B158DRAFT_0783at 787.925 kb on + strand, within B158DRAFT_0783at 788.062 kb on - strand, within B158DRAFT_0783at 788.082 kb on + strand, within B158DRAFT_0783at 788.123 kb on + strand, within B158DRAFT_0783at 788.128 kb on + strand, within B158DRAFT_0783at 788.145 kb on - strand, within B158DRAFT_0783at 788.161 kb on + strand, within B158DRAFT_0783at 788.248 kb on - strand, within B158DRAFT_0783at 788.365 kb on + strand, within B158DRAFT_0783at 788.378 kb on + strand, within B158DRAFT_0783at 788.389 kb on - strand, within B158DRAFT_0783at 788.417 kb on + strand, within B158DRAFT_0783at 788.417 kb on + strand, within B158DRAFT_0783at 788.418 kb on + strand, within B158DRAFT_0783at 788.566 kb on - strandat 788.635 kb on + strandat 788.643 kb on - strandat 788.643 kb on - strandat 788.648 kb on + strandat 788.656 kb on - strandat 788.681 kb on + strandat 788.693 kb on + strandat 788.830 kb on - strandat 788.836 kb on - strandat 788.836 kb on - strandat 788.846 kb on + strand, within B158DRAFT_0784at 788.892 kb on - strand, within B158DRAFT_0784at 788.961 kb on - strand, within B158DRAFT_0784at 789.049 kb on + strand, within B158DRAFT_0784at 789.050 kb on + strand, within B158DRAFT_0784at 789.050 kb on + strand, within B158DRAFT_0784at 789.050 kb on + strand, within B158DRAFT_0784at 789.050 kb on + strand, within B158DRAFT_0784at 789.057 kb on - strand, within B158DRAFT_0784at 789.058 kb on - strand, within B158DRAFT_0784at 789.058 kb on - strand, within B158DRAFT_0784at 789.138 kb on + strand, within B158DRAFT_0784at 789.263 kb on + strand, within B158DRAFT_0784at 789.517 kb on - strand, within B158DRAFT_0785at 789.527 kb on - strand, within B158DRAFT_0785at 789.527 kb on - strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.682 kb on + strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785at 789.690 kb on - strand, within B158DRAFT_0785

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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786,221 - +1.1
786,305 + -0.5
786,554 - +0.6
786,658 - B158DRAFT_0783 0.14 +0.9
786,666 - B158DRAFT_0783 0.14 +0.9
786,670 - B158DRAFT_0783 0.14 +1.1
786,729 - B158DRAFT_0783 0.17 +0.7
786,760 - B158DRAFT_0783 0.18 +0.9
786,831 - B158DRAFT_0783 0.21 +0.6
786,841 + B158DRAFT_0783 0.21 +0.6
786,859 + B158DRAFT_0783 0.22 +0.7
786,859 + B158DRAFT_0783 0.22 +0.9
786,859 + B158DRAFT_0783 0.22 +0.6
786,859 + B158DRAFT_0783 0.22 +1.3
786,859 + B158DRAFT_0783 0.22 +0.4
786,859 + B158DRAFT_0783 0.22 +0.5
786,867 - B158DRAFT_0783 0.22 +0.9
786,867 - B158DRAFT_0783 0.22 +0.9
786,867 - B158DRAFT_0783 0.22 +1.0
786,867 - B158DRAFT_0783 0.22 +1.1
786,867 - B158DRAFT_0783 0.22 +0.7
786,867 - B158DRAFT_0783 0.22 +1.0
786,867 - B158DRAFT_0783 0.22 +0.7
786,867 - B158DRAFT_0783 0.22 +1.1
786,867 - B158DRAFT_0783 0.22 +1.5
786,867 - B158DRAFT_0783 0.22 +1.0
786,867 - B158DRAFT_0783 0.22 +1.0
786,867 - B158DRAFT_0783 0.22 +0.7
786,870 + B158DRAFT_0783 0.23 +0.6
786,870 + B158DRAFT_0783 0.23 +0.6
786,877 - B158DRAFT_0783 0.23 +0.5
786,878 - B158DRAFT_0783 0.23 +0.6
786,885 - B158DRAFT_0783 0.23 +0.1
786,885 - B158DRAFT_0783 0.23 +0.8
786,920 + B158DRAFT_0783 0.25 +1.0
786,928 - B158DRAFT_0783 0.25 +0.8
786,928 - B158DRAFT_0783 0.25 +1.3
786,933 - B158DRAFT_0783 0.25 +0.7
787,048 - B158DRAFT_0783 0.30 +0.6
787,093 - B158DRAFT_0783 0.32 +0.1
787,156 - B158DRAFT_0783 0.34 +0.6
787,156 - B158DRAFT_0783 0.34 +0.9
787,216 + B158DRAFT_0783 0.37 +0.5
787,216 + B158DRAFT_0783 0.37 +0.2
787,216 + B158DRAFT_0783 0.37 +0.5
787,216 + B158DRAFT_0783 0.37 +0.6
787,216 + B158DRAFT_0783 0.37 +0.3
787,216 + B158DRAFT_0783 0.37 +0.3
787,224 - B158DRAFT_0783 0.37 +0.4
787,224 - B158DRAFT_0783 0.37 +0.6
787,224 - B158DRAFT_0783 0.37 +0.9
787,246 + B158DRAFT_0783 0.38 +0.2
787,246 + B158DRAFT_0783 0.38 +0.9
787,254 - B158DRAFT_0783 0.38 +0.7
787,328 - B158DRAFT_0783 0.41 +1.6
787,407 - B158DRAFT_0783 0.45 +0.3
787,484 + B158DRAFT_0783 0.48 +0.6
787,487 - B158DRAFT_0783 0.48 +0.8
787,487 - B158DRAFT_0783 0.48 +0.7
787,492 - B158DRAFT_0783 0.48 +0.2
787,494 - B158DRAFT_0783 0.48 +1.7
787,534 + B158DRAFT_0783 0.50 +0.4
787,534 + B158DRAFT_0783 0.50 +0.7
787,534 + B158DRAFT_0783 0.50 +0.5
787,542 - B158DRAFT_0783 0.50 +1.2
787,542 - B158DRAFT_0783 0.50 +1.0
787,568 + B158DRAFT_0783 0.51 +0.5
787,568 + B158DRAFT_0783 0.51 +0.5
787,568 + B158DRAFT_0783 0.51 +0.4
787,568 + B158DRAFT_0783 0.51 +0.5
787,568 + B158DRAFT_0783 0.51 +0.7
787,660 - B158DRAFT_0783 0.55 +0.9
787,660 - B158DRAFT_0783 0.55 +0.6
787,697 - B158DRAFT_0783 0.57 +0.5
787,699 - B158DRAFT_0783 0.57 +0.6
787,710 + B158DRAFT_0783 0.57 +0.3
787,859 + B158DRAFT_0783 0.63 +0.5
787,925 + B158DRAFT_0783 0.66 +0.2
787,925 + B158DRAFT_0783 0.66 +0.4
788,062 - B158DRAFT_0783 0.72 +0.8
788,082 + B158DRAFT_0783 0.73 +0.1
788,123 + B158DRAFT_0783 0.74 +0.3
788,128 + B158DRAFT_0783 0.75 +0.8
788,145 - B158DRAFT_0783 0.75 +1.0
788,161 + B158DRAFT_0783 0.76 +1.1
788,248 - B158DRAFT_0783 0.79 +1.0
788,365 + B158DRAFT_0783 0.84 +0.4
788,378 + B158DRAFT_0783 0.85 +0.9
788,389 - B158DRAFT_0783 0.85 +0.5
788,417 + B158DRAFT_0783 0.86 +0.0
788,417 + B158DRAFT_0783 0.86 +0.5
788,418 + B158DRAFT_0783 0.86 -0.1
788,566 - +1.5
788,635 + +0.2
788,643 - +0.5
788,643 - +0.4
788,648 + +0.3
788,656 - +0.9
788,681 + +0.5
788,693 + +0.0
788,830 - +0.9
788,836 - +1.0
788,836 - +0.7
788,846 + B158DRAFT_0784 0.12 +0.6
788,892 - B158DRAFT_0784 0.19 +0.8
788,961 - B158DRAFT_0784 0.31 +0.6
789,049 + B158DRAFT_0784 0.46 +0.7
789,050 + B158DRAFT_0784 0.46 +0.8
789,050 + B158DRAFT_0784 0.46 +0.8
789,050 + B158DRAFT_0784 0.46 -0.1
789,050 + B158DRAFT_0784 0.46 +0.8
789,057 - B158DRAFT_0784 0.47 +0.7
789,058 - B158DRAFT_0784 0.47 +0.2
789,058 - B158DRAFT_0784 0.47 +0.2
789,138 + B158DRAFT_0784 0.61 +0.5
789,263 + B158DRAFT_0784 0.82 +0.8
789,517 - B158DRAFT_0785 0.14 +0.0
789,527 - B158DRAFT_0785 0.15 +0.0
789,527 - B158DRAFT_0785 0.15 -1.8
789,682 + B158DRAFT_0785 0.31 -1.3
789,682 + B158DRAFT_0785 0.31 +0.0
789,682 + B158DRAFT_0785 0.31 -2.3
789,682 + B158DRAFT_0785 0.31 +0.2
789,682 + B158DRAFT_0785 0.31 -0.4
789,682 + B158DRAFT_0785 0.31 +0.3
789,682 + B158DRAFT_0785 0.31 +0.4
789,682 + B158DRAFT_0785 0.31 -0.2
789,690 - B158DRAFT_0785 0.32 +0.1
789,690 - B158DRAFT_0785 0.32 -0.2
789,690 - B158DRAFT_0785 0.32 +0.1
789,690 - B158DRAFT_0785 0.32 -0.4
789,690 - B158DRAFT_0785 0.32 -0.3
789,690 - B158DRAFT_0785 0.32 +0.5
789,690 - B158DRAFT_0785 0.32 -0.3
789,690 - B158DRAFT_0785 0.32 -0.1
789,690 - B158DRAFT_0785 0.32 +0.7
789,690 - B158DRAFT_0785 0.32 +0.4
789,690 - B158DRAFT_0785 0.32 -0.3

Or see this region's nucleotide sequence