Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0977

Experiment: m.b. Phosphomycin 1 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0975 and B158DRAFT_0976 are separated by 32 nucleotidesB158DRAFT_0976 and B158DRAFT_0977 are separated by 40 nucleotidesB158DRAFT_0977 and B158DRAFT_0978 are separated by 149 nucleotides B158DRAFT_0975: B158DRAFT_0975 - nudix-type nucleoside diphosphatase, YffH/AdpP family, at 1,006,012 to 1,006,623 _0975 B158DRAFT_0976: B158DRAFT_0976 - Uncharacterized protein conserved in bacteria, at 1,006,656 to 1,007,132 _0976 B158DRAFT_0977: B158DRAFT_0977 - Predicted phosphohydrolases, at 1,007,173 to 1,007,997 _0977 B158DRAFT_0978: B158DRAFT_0978 - DNA topoisomerase IV, B subunit, proteobacterial, at 1,008,147 to 1,010,036 _0978 Position (kb) 1007 1008Strain fitness (log2 ratio) -2 -1 0 1 2at 1006.199 kb on - strand, within B158DRAFT_0975at 1006.214 kb on + strand, within B158DRAFT_0975at 1006.219 kb on + strand, within B158DRAFT_0975at 1006.227 kb on - strand, within B158DRAFT_0975at 1006.246 kb on + strand, within B158DRAFT_0975at 1006.254 kb on - strand, within B158DRAFT_0975at 1006.254 kb on - strand, within B158DRAFT_0975at 1006.259 kb on - strand, within B158DRAFT_0975at 1006.264 kb on - strand, within B158DRAFT_0975at 1006.287 kb on + strand, within B158DRAFT_0975at 1006.305 kb on - strand, within B158DRAFT_0975at 1006.307 kb on + strand, within B158DRAFT_0975at 1006.335 kb on + strand, within B158DRAFT_0975at 1006.338 kb on - strand, within B158DRAFT_0975at 1006.339 kb on - strand, within B158DRAFT_0975at 1006.379 kb on + strand, within B158DRAFT_0975at 1006.385 kb on + strand, within B158DRAFT_0975at 1006.394 kb on - strand, within B158DRAFT_0975at 1006.400 kb on + strand, within B158DRAFT_0975at 1006.411 kb on - strand, within B158DRAFT_0975at 1006.411 kb on - strand, within B158DRAFT_0975at 1006.428 kb on + strand, within B158DRAFT_0975at 1006.488 kb on + strand, within B158DRAFT_0975at 1006.645 kb on + strandat 1006.653 kb on + strandat 1006.653 kb on + strandat 1006.653 kb on - strandat 1006.694 kb on + strandat 1006.694 kb on + strandat 1006.702 kb on - strandat 1006.702 kb on - strandat 1006.739 kb on + strand, within B158DRAFT_0976at 1006.752 kb on + strand, within B158DRAFT_0976at 1006.758 kb on + strand, within B158DRAFT_0976at 1006.814 kb on + strand, within B158DRAFT_0976at 1006.822 kb on + strand, within B158DRAFT_0976at 1006.822 kb on - strand, within B158DRAFT_0976at 1006.858 kb on + strand, within B158DRAFT_0976at 1006.858 kb on + strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.866 kb on - strand, within B158DRAFT_0976at 1006.877 kb on + strand, within B158DRAFT_0976at 1006.885 kb on - strand, within B158DRAFT_0976at 1006.963 kb on + strand, within B158DRAFT_0976at 1006.963 kb on - strand, within B158DRAFT_0976at 1006.970 kb on - strand, within B158DRAFT_0976at 1007.062 kb on + strand, within B158DRAFT_0976at 1007.090 kb on + strandat 1007.178 kb on - strandat 1007.184 kb on - strandat 1007.231 kb on + strandat 1007.231 kb on + strandat 1007.239 kb on - strandat 1007.270 kb on - strand, within B158DRAFT_0977at 1007.373 kb on + strand, within B158DRAFT_0977at 1007.376 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.378 kb on + strand, within B158DRAFT_0977at 1007.381 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.386 kb on - strand, within B158DRAFT_0977at 1007.424 kb on - strand, within B158DRAFT_0977at 1007.462 kb on - strand, within B158DRAFT_0977at 1007.478 kb on - strand, within B158DRAFT_0977at 1007.563 kb on - strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.567 kb on + strand, within B158DRAFT_0977at 1007.572 kb on + strand, within B158DRAFT_0977at 1007.604 kb on - strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.606 kb on + strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.614 kb on - strand, within B158DRAFT_0977at 1007.630 kb on + strand, within B158DRAFT_0977at 1007.754 kb on + strand, within B158DRAFT_0977at 1007.754 kb on + strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.762 kb on - strand, within B158DRAFT_0977at 1007.888 kb on + strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.896 kb on - strand, within B158DRAFT_0977at 1007.915 kb on + strandat 1007.915 kb on + strandat 1007.923 kb on - strandat 1008.017 kb on - strandat 1008.024 kb on + strandat 1008.027 kb on - strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.029 kb on + strandat 1008.037 kb on - strandat 1008.037 kb on - strandat 1008.037 kb on - strandat 1008.037 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml
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1,006,199 - B158DRAFT_0975 0.31 +0.5
1,006,214 + B158DRAFT_0975 0.33 +2.4
1,006,219 + B158DRAFT_0975 0.34 -1.1
1,006,227 - B158DRAFT_0975 0.35 -0.1
1,006,246 + B158DRAFT_0975 0.38 -0.1
1,006,254 - B158DRAFT_0975 0.40 -0.1
1,006,254 - B158DRAFT_0975 0.40 -0.0
1,006,259 - B158DRAFT_0975 0.40 -0.1
1,006,264 - B158DRAFT_0975 0.41 -0.4
1,006,287 + B158DRAFT_0975 0.45 +0.2
1,006,305 - B158DRAFT_0975 0.48 +0.1
1,006,307 + B158DRAFT_0975 0.48 +0.1
1,006,335 + B158DRAFT_0975 0.53 +0.0
1,006,338 - B158DRAFT_0975 0.53 -0.1
1,006,339 - B158DRAFT_0975 0.53 +0.2
1,006,379 + B158DRAFT_0975 0.60 -0.7
1,006,385 + B158DRAFT_0975 0.61 -0.1
1,006,394 - B158DRAFT_0975 0.62 -0.4
1,006,400 + B158DRAFT_0975 0.63 -0.0
1,006,411 - B158DRAFT_0975 0.65 +0.1
1,006,411 - B158DRAFT_0975 0.65 -0.2
1,006,428 + B158DRAFT_0975 0.68 +0.1
1,006,488 + B158DRAFT_0975 0.78 -0.3
1,006,645 + -0.7
1,006,653 + -0.6
1,006,653 + -0.4
1,006,653 - -0.6
1,006,694 + -0.2
1,006,694 + +0.3
1,006,702 - +0.6
1,006,702 - +0.1
1,006,739 + B158DRAFT_0976 0.17 -0.5
1,006,752 + B158DRAFT_0976 0.20 +0.5
1,006,758 + B158DRAFT_0976 0.21 -0.3
1,006,814 + B158DRAFT_0976 0.33 -0.0
1,006,822 + B158DRAFT_0976 0.35 +0.4
1,006,822 - B158DRAFT_0976 0.35 +0.3
1,006,858 + B158DRAFT_0976 0.42 -0.1
1,006,858 + B158DRAFT_0976 0.42 +0.1
1,006,866 - B158DRAFT_0976 0.44 +0.1
1,006,866 - B158DRAFT_0976 0.44 -0.7
1,006,866 - B158DRAFT_0976 0.44 -0.0
1,006,866 - B158DRAFT_0976 0.44 +0.1
1,006,877 + B158DRAFT_0976 0.46 -0.5
1,006,885 - B158DRAFT_0976 0.48 -0.1
1,006,963 + B158DRAFT_0976 0.64 +0.4
1,006,963 - B158DRAFT_0976 0.64 -2.4
1,006,970 - B158DRAFT_0976 0.66 -0.4
1,007,062 + B158DRAFT_0976 0.85 +0.5
1,007,090 + +0.0
1,007,178 - -0.5
1,007,184 - -0.3
1,007,231 + +0.0
1,007,231 + -0.5
1,007,239 - -0.6
1,007,270 - B158DRAFT_0977 0.12 -0.6
1,007,373 + B158DRAFT_0977 0.24 -0.1
1,007,376 + B158DRAFT_0977 0.25 -0.2
1,007,378 + B158DRAFT_0977 0.25 -0.8
1,007,378 + B158DRAFT_0977 0.25 -1.3
1,007,378 + B158DRAFT_0977 0.25 -0.7
1,007,378 + B158DRAFT_0977 0.25 -0.0
1,007,378 + B158DRAFT_0977 0.25 -0.1
1,007,381 - B158DRAFT_0977 0.25 -0.6
1,007,386 - B158DRAFT_0977 0.26 -1.0
1,007,386 - B158DRAFT_0977 0.26 -0.7
1,007,386 - B158DRAFT_0977 0.26 -0.8
1,007,386 - B158DRAFT_0977 0.26 -0.3
1,007,386 - B158DRAFT_0977 0.26 -0.3
1,007,386 - B158DRAFT_0977 0.26 -0.0
1,007,386 - B158DRAFT_0977 0.26 -1.1
1,007,386 - B158DRAFT_0977 0.26 -0.3
1,007,386 - B158DRAFT_0977 0.26 -0.9
1,007,386 - B158DRAFT_0977 0.26 -0.9
1,007,386 - B158DRAFT_0977 0.26 -0.8
1,007,424 - B158DRAFT_0977 0.30 +0.1
1,007,462 - B158DRAFT_0977 0.35 -0.8
1,007,478 - B158DRAFT_0977 0.37 -0.5
1,007,563 - B158DRAFT_0977 0.47 +0.2
1,007,567 + B158DRAFT_0977 0.48 -0.9
1,007,567 + B158DRAFT_0977 0.48 -0.1
1,007,572 + B158DRAFT_0977 0.48 -0.8
1,007,604 - B158DRAFT_0977 0.52 -0.6
1,007,606 + B158DRAFT_0977 0.52 -1.0
1,007,606 + B158DRAFT_0977 0.52 -0.1
1,007,606 + B158DRAFT_0977 0.52 -0.3
1,007,614 - B158DRAFT_0977 0.53 +0.4
1,007,614 - B158DRAFT_0977 0.53 -0.7
1,007,614 - B158DRAFT_0977 0.53 -0.8
1,007,614 - B158DRAFT_0977 0.53 -1.4
1,007,630 + B158DRAFT_0977 0.55 -0.9
1,007,754 + B158DRAFT_0977 0.70 -0.3
1,007,754 + B158DRAFT_0977 0.70 -0.1
1,007,762 - B158DRAFT_0977 0.71 -0.5
1,007,762 - B158DRAFT_0977 0.71 -0.5
1,007,762 - B158DRAFT_0977 0.71 -1.8
1,007,888 + B158DRAFT_0977 0.87 -0.8
1,007,896 - B158DRAFT_0977 0.88 -0.6
1,007,896 - B158DRAFT_0977 0.88 -0.2
1,007,896 - B158DRAFT_0977 0.88 -1.0
1,007,915 + +0.5
1,007,915 + -1.2
1,007,923 - -0.9
1,008,017 - +0.7
1,008,024 + +0.5
1,008,027 - -0.3
1,008,029 + -0.4
1,008,029 + -0.0
1,008,029 + +0.5
1,008,029 + -0.2
1,008,029 + -0.1
1,008,037 - +0.3
1,008,037 - +0.5
1,008,037 - +0.1
1,008,037 - +0.1

Or see this region's nucleotide sequence